RNA–Protein interactions for RNA: ENST00000380152.7

BRCA2-201, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 5 BASIC

Gene BRCA2, Length 11,986 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-201ENST00000380152 UBE2Q2Q8WVN8 375 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 AAMPQ13685 434 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 PODXL2Q9NZ53 605 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 C9orf78Q9NZ63 289 aaPredicted RBP5.08□□□□□ -1.6
BRCA2-201ENST00000380152 EIF2S2P20042 333 aaKnown RBP5.08□□□□□ -1.6
BRCA2-201ENST00000380152 SKIDA1Q1XH10 827 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 ROCK1Q13464 1354 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 FKBP5Q13451 457 aaPredicted RBP5.08□□□□□ -1.6
BRCA2-201ENST00000380152 CCDC34Q96HJ3 373 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 AK9Q5TCS8 1911 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 CTTNBP2Q8WZ74 1663 aa5.08□□□□□ -1.6
BRCA2-201ENST00000380152 TSR1Q2NL82 804 aaKnown RBP5.07□□□□□ -1.6
BRCA2-201ENST00000380152 ATF7IPQ6VMQ6 1270 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 PDCL3Q9H2J4 239 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 EHBP1L1Q8N3D4 1523 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 MINK1Q8N4C8 1332 aaPredicted RBP5.07□□□□□ -1.6
BRCA2-201ENST00000380152 TSR2Q969E8 191 aaKnown RBP5.07□□□□□ -1.6
BRCA2-201ENST00000380152 SETQ01105 290 aaPredicted RBP5.07□□□□□ -1.6
BRCA2-201ENST00000380152 ZMYND15Q9H091 742 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 NKTRP30414 1462 aaKnown RBP5.07□□□□□ -1.6
BRCA2-201ENST00000380152 PRXQ9BXM0 1461 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 TAF7LQ5H9L4 462 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 RASSF8Q8NHQ8 419 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 MAPKBP1O60336 1514 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 CBX1P83916 185 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 CHD1LQ86WJ1 897 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 TRIM5Q9C035 493 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.07□□□□□ -1.6
BRCA2-201ENST00000380152 TMEM132EQ6IEE7 984 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 WWC1Q8IX03 1113 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 NGDNQ8NEJ9 315 aaKnown RBP5.07□□□□□ -1.6
BRCA2-201ENST00000380152 PRDM10Q9NQV6 1147 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 GGNBP2Q9H3C7 697 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 TSPY26PQ9H489 355 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 HECW1Q76N89 1606 aa5.07□□□□□ -1.6
BRCA2-201ENST00000380152 SYCE3A1L190 88 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 EXOSC9Q06265 439 aaKnown RBP5.06□□□□□ -1.6
BRCA2-201ENST00000380152 LETM1O95202 739 aaPredicted RBP5.06□□□□□ -1.6
BRCA2-201ENST00000380152 TPM3P06753 285 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 MVPQ14764 893 aaKnown RBP5.06□□□□□ -1.6
BRCA2-201ENST00000380152 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.06□□□□□ -1.6
BRCA2-201ENST00000380152 CDC45O75419 566 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 FOSBP53539 338 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 COG3Q96JB2 828 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 NAIPQ13075 1403 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 RUFY2Q8WXA3 655 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 HDAC5Q9UQL6 1122 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 CEBPZQ03701 1054 aaKnown RBP5.06□□□□□ -1.6
BRCA2-201ENST00000380152 ZSCAN30Q86W11 494 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 VGFO15240 615 aaPredicted RBP5.06□□□□□ -1.6
BRCA2-201ENST00000380152 CLSTN1O94985 981 aa5.06□□□□□ -1.6
BRCA2-201ENST00000380152 KIAA1107Q9UPP5 1409 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 GCC1Q96CN9 775 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 SLC12A5Q9H2X9 1139 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 EFCAB5A4FU69 1503 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 SLFN5Q08AF3 891 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 RNF20Q5VTR2 975 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 CWC22Q9HCG8 908 aaKnown RBP5.05□□□□□ -1.6
BRCA2-201ENST00000380152 FMNL2Q96PY5 1086 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 TBC1D2Q9BYX2 928 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 ISY1Q9ULR0 285 aaKnown RBP5.05□□□□□ -1.6
BRCA2-201ENST00000380152 FIBPO43427 364 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 MAPK8IP2Q13387 824 aaPredicted RBP5.05□□□□□ -1.6
BRCA2-201ENST00000380152 NAT10Q9H0A0 1025 aaKnown RBP5.05□□□□□ -1.6
BRCA2-201ENST00000380152 BIVM-ERCC5R4GMW8 1640 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 MBD3O95983 291 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 IFIT2P09913 472 aaKnown RBP5.05□□□□□ -1.6
BRCA2-201ENST00000380152 CHMP4AQ9BY43 222 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 MCM2P49736 904 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 CCDC66A2RUB6 948 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 HMGN5P82970 282 aaKnown RBP5.05□□□□□ -1.6
BRCA2-201ENST00000380152 IGHDP01880 384 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 GNAI1P63096 354 aa5.05□□□□□ -1.6
BRCA2-201ENST00000380152 FAM177A1Q8N128 213 aaPredicted RBP5.04□□□□□ -1.6
BRCA2-201ENST00000380152 TOMM22Q9NS69 142 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 ARHGAP5Q13017 1502 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 SDF4Q9BRK5 362 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 CABP2Q9NPB3 220 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 ARGLU1Q9NWB6 273 aaPredicted RBP5.04□□□□□ -1.6
BRCA2-201ENST00000380152 MAP4K4O95819 1239 aaPredicted RBP5.04□□□□□ -1.6
BRCA2-201ENST00000380152 CFAP70Q5T0N1 1121 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 API5Q9BZZ5 524 aaKnown RBP5.04□□□□□ -1.6
BRCA2-201ENST00000380152 ERBINQ96RT1 1412 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 NCOA1Q15788 1441 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 NCBP3Q53F19 620 aaKnown RBP5.04□□□□□ -1.6
BRCA2-201ENST00000380152 PANK2Q9BZ23 570 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 CC2D2AQ9P2K1 1620 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 RABEP1Q15276 862 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 TPM1P09493 284 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 PDE4CQ08493 712 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 DAPK1P53355 1430 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 APPP05067 770 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 TEFQ10587 303 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 NOM1Q5C9Z4 860 aaKnown RBP5.04□□□□□ -1.6
BRCA2-201ENST00000380152 MNS1Q8NEH6 495 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 TSPYL4Q9UJ04 414 aa5.04□□□□□ -1.6
BRCA2-201ENST00000380152 DUSP27Q5VZP5 1158 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 CCDC70Q6NSX1 233 aa5.03□□□□□ -1.6
BRCA2-201ENST00000380152 CDK13Q14004 1512 aaKnown RBP5.03□□□□□ -1.6
BRCA2-201ENST00000380152 TWISTNBQ3B726 338 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms