RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 SKOR2Q2VWA4 1001 aaPredicted RBP15.95■□□□□ 0.14
HIPK3-202ENST00000379016 SMARCE1Q969G3 411 aa15.94■□□□□ 0.14
HIPK3-202ENST00000379016 TICAM2Q86XR7 235 aa15.94■□□□□ 0.14
HIPK3-202ENST00000379016 FMNL2Q96PY5 1086 aa15.94■□□□□ 0.14
HIPK3-202ENST00000379016 RSF1Q96T23 1441 aaPredicted RBP15.94■□□□□ 0.14
HIPK3-202ENST00000379016 COMMD10Q9Y6G5 202 aa15.94■□□□□ 0.14
HIPK3-202ENST00000379016 CGNL1Q0VF96 1302 aa15.94■□□□□ 0.14
HIPK3-202ENST00000379016 RBM25P49756 843 aaKnown RBP15.93■□□□□ 0.14
HIPK3-202ENST00000379016 TANGO6Q9C0B7 1094 aa15.93■□□□□ 0.14
HIPK3-202ENST00000379016 DEF6Q9H4E7 631 aa15.93■□□□□ 0.14
HIPK3-202ENST00000379016 STAMBPO95630 424 aa15.93■□□□□ 0.14
HIPK3-202ENST00000379016 XBP1P17861 261 aa15.93■□□□□ 0.14
HIPK3-202ENST00000379016 RALYLQ86SE5 291 aaKnown RBP15.93■□□□□ 0.14
HIPK3-202ENST00000379016 SERPINA10Q9UK55 444 aa15.93■□□□□ 0.14
HIPK3-202ENST00000379016 SMC3Q9UQE7 1217 aa15.93■□□□□ 0.14
HIPK3-202ENST00000379016 FAM177BA6PVY3 158 aa15.93■□□□□ 0.14
HIPK3-202ENST00000379016 IPO9Q96P70 1041 aaKnown RBP15.92■□□□□ 0.14
HIPK3-202ENST00000379016 NAT10Q9H0A0 1025 aaKnown RBP15.92■□□□□ 0.14
HIPK3-202ENST00000379016 TEFQ10587 303 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 NEUROD6Q96NK8 337 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 SDF4Q9BRK5 362 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 EID1Q9Y6B2 187 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 PPM1EQ8WY54 764 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 DESP17661 470 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 FILIP1LQ4L180 1135 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 RNF20Q5VTR2 975 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 ZWINTO95229 277 aa15.91■□□□□ 0.14
HIPK3-202ENST00000379016 CCDC91Q7Z6B0 441 aa15.9■□□□□ 0.14
HIPK3-202ENST00000379016 FAM177A1Q8N128 213 aaPredicted RBP15.9■□□□□ 0.14
HIPK3-202ENST00000379016 CENPJQ9HC77 1338 aaPredicted RBP15.9■□□□□ 0.14
HIPK3-202ENST00000379016 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.89■□□□□ 0.13
HIPK3-202ENST00000379016 EIF3JO75822 258 aaKnown RBP15.89■□□□□ 0.13
HIPK3-202ENST00000379016 CCDC66A2RUB6 948 aa15.89■□□□□ 0.13
HIPK3-202ENST00000379016 CFAP45Q9UL16 551 aa15.89■□□□□ 0.13
HIPK3-202ENST00000379016 WDR78Q5VTH9 848 aa15.88■□□□□ 0.13
HIPK3-202ENST00000379016 LRRFIP2Q9Y608 721 aaKnown RBP15.88■□□□□ 0.13
HIPK3-202ENST00000379016 HSPA5P11021 654 aaKnown RBP15.88■□□□□ 0.13
HIPK3-202ENST00000379016 HOMER2Q9NSB8 354 aa15.88■□□□□ 0.13
HIPK3-202ENST00000379016 CCDC113Q9H0I3 377 aa15.88■□□□□ 0.13
HIPK3-202ENST00000379016 SMC1AQ14683 1233 aaKnown RBP15.88■□□□□ 0.13
HIPK3-202ENST00000379016 MAP2K1Q02750 393 aaPredicted RBP15.87■□□□□ 0.13
HIPK3-202ENST00000379016 G3BP1Q13283 466 aaKnown RBP eCLIP15.87■□□□□ 0.13
HIPK3-202ENST00000379016 CCNB3Q8WWL7 1395 aa15.87■□□□□ 0.13
HIPK3-202ENST00000379016 ZNHIT6Q9NWK9 470 aaKnown RBP15.87■□□□□ 0.13
HIPK3-202ENST00000379016 TXLNAP40222 546 aa15.87■□□□□ 0.13
HIPK3-202ENST00000379016 RBM5P52756 815 aaKnown RBP eCLIP15.86■□□□□ 0.13
HIPK3-202ENST00000379016 PKD2Q13563 968 aa15.86■□□□□ 0.13
HIPK3-202ENST00000379016 SOGA3Q5TF21 947 aa15.86■□□□□ 0.13
HIPK3-202ENST00000379016 SPATA24Q86W54 205 aa15.86■□□□□ 0.13
HIPK3-202ENST00000379016 CA8P35219 290 aa15.86■□□□□ 0.13
HIPK3-202ENST00000379016 FAM43AQ8N2R8 423 aa15.86■□□□□ 0.13
HIPK3-202ENST00000379016 CEBPZQ03701 1054 aaKnown RBP15.85■□□□□ 0.13
HIPK3-202ENST00000379016 UBE4AQ14139 1066 aa15.85■□□□□ 0.13
HIPK3-202ENST00000379016 TRAK1Q9UPV9 953 aa15.85■□□□□ 0.13
HIPK3-202ENST00000379016 PAXIP1Q6ZW49 1069 aaPredicted RBP15.85■□□□□ 0.13
HIPK3-202ENST00000379016 SPC24Q8NBT2 197 aa15.84■□□□□ 0.13
HIPK3-202ENST00000379016 TRIM5Q9C035 493 aa15.84■□□□□ 0.13
HIPK3-202ENST00000379016 TRIM21P19474 475 aaKnown RBP15.84■□□□□ 0.13
HIPK3-202ENST00000379016 TERF2IPQ9NYB0 399 aa15.84■□□□□ 0.13
HIPK3-202ENST00000379016 RABEP1Q15276 862 aa15.84■□□□□ 0.13
HIPK3-202ENST00000379016 ROCK2O75116 1388 aaKnown RBP15.83■□□□□ 0.13
HIPK3-202ENST00000379016 AIMP1Q12904 312 aaKnown RBP15.83■□□□□ 0.12
HIPK3-202ENST00000379016 GSE1Q14687 1217 aa15.83■□□□□ 0.12
HIPK3-202ENST00000379016 CCDC175P0C221 793 aa15.83■□□□□ 0.12
HIPK3-202ENST00000379016 NUTM2GQ5VZR2 741 aa15.83■□□□□ 0.12
HIPK3-202ENST00000379016 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
HIPK3-202ENST00000379016 SLC26A8Q96RN1 970 aa15.82■□□□□ 0.12
HIPK3-202ENST00000379016 EIF3AQ14152 1382 aaKnown RBP15.82■□□□□ 0.12
HIPK3-202ENST00000379016 ZNF526Q8TF50 670 aaPredicted RBP15.82■□□□□ 0.12
HIPK3-202ENST00000379016 CFAP57Q96MR6 1250 aa15.82■□□□□ 0.12
HIPK3-202ENST00000379016 DRC1Q96MC2 740 aa15.82■□□□□ 0.12
HIPK3-202ENST00000379016 TMCO5BA8MYB1 307 aa15.81■□□□□ 0.12
HIPK3-202ENST00000379016 KIF3BO15066 747 aa15.81■□□□□ 0.12
HIPK3-202ENST00000379016 REC8O95072 547 aa15.81■□□□□ 0.12
HIPK3-202ENST00000379016 RBM10P98175 930 aaKnown RBP15.81■□□□□ 0.12
HIPK3-202ENST00000379016 BMS1Q14692 1282 aaKnown RBP15.81■□□□□ 0.12
HIPK3-202ENST00000379016 MRPS9P82933 396 aaKnown RBP15.8■□□□□ 0.12
HIPK3-202ENST00000379016 SCLT1Q96NL6 688 aa15.8■□□□□ 0.12
HIPK3-202ENST00000379016 LUC7LQ9NQ29 371 aaKnown RBP15.8■□□□□ 0.12
HIPK3-202ENST00000379016 DDX58O95786 925 aaKnown RBP15.8■□□□□ 0.12
HIPK3-202ENST00000379016 ERICH4A6NGS2 130 aa15.8■□□□□ 0.12
HIPK3-202ENST00000379016 SSBP05455 408 aaKnown RBP eCLIP15.8■□□□□ 0.12
HIPK3-202ENST00000379016 SF3B2Q13435 895 aaKnown RBP15.8■□□□□ 0.12
HIPK3-202ENST00000379016 LRRCC1Q9C099 1032 aa15.79■□□□□ 0.12
HIPK3-202ENST00000379016 FAM161AQ3B820 660 aa15.79■□□□□ 0.12
HIPK3-202ENST00000379016 SERPINC1P01008 464 aa15.79■□□□□ 0.12
HIPK3-202ENST00000379016 SART3Q15020 963 aaKnown RBP15.79■□□□□ 0.12
HIPK3-202ENST00000379016 NFKBIBQ15653 356 aa15.79■□□□□ 0.12
HIPK3-202ENST00000379016 GOPCQ9HD26 462 aa15.78■□□□□ 0.12
HIPK3-202ENST00000379016 RIC3Q7Z5B4 369 aa15.78■□□□□ 0.12
HIPK3-202ENST00000379016 PODXL2Q9NZ53 605 aa15.78■□□□□ 0.12
HIPK3-202ENST00000379016 SLC3A2P08195 630 aaKnown RBP15.78■□□□□ 0.12
HIPK3-202ENST00000379016 ERC1Q8IUD2 1116 aa15.78■□□□□ 0.12
HIPK3-202ENST00000379016 PABPN1LA6NDY0 278 aaKnown RBP15.78■□□□□ 0.12
HIPK3-202ENST00000379016 PPFIBP1Q86W92 1011 aa15.77■□□□□ 0.12
HIPK3-202ENST00000379016 TIGD1Q96MW7 591 aa15.77■□□□□ 0.12
HIPK3-202ENST00000379016 BAZ1BQ9UIG0 1483 aaKnown RBP15.77■□□□□ 0.12
HIPK3-202ENST00000379016 KINO60870 393 aaKnown RBP15.76■□□□□ 0.11
HIPK3-202ENST00000379016 EPB41L2O43491 1005 aaKnown RBP15.76■□□□□ 0.11
HIPK3-202ENST00000379016 ZNF76P36508 570 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms