RNA–Protein interactions for RNA: ENST00000377115.4

FOXA2-201, Transcript of forkhead box A2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXA2, Length 2,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-201ENST00000377115 RWDD1Q9H446 243 aaPredicted RBP29.32■■■□□ 2.28
FOXA2-201ENST00000377115 MORC1Q86VD1 984 aa29.31■■■□□ 2.28
FOXA2-201ENST00000377115 PHF23Q9BUL5 403 aaPredicted RBP29.31■■■□□ 2.28
FOXA2-201ENST00000377115 MAP3K4Q9Y6R4 1608 aa29.31■■■□□ 2.28
FOXA2-201ENST00000377115 NSD3Q9BZ95 1437 aa29.31■■■□□ 2.28
FOXA2-201ENST00000377115 AFAP1Q8N556 730 aa29.31■■■□□ 2.28
FOXA2-201ENST00000377115 GZF1Q9H116 711 aaPredicted RBP29.31■■■□□ 2.28
FOXA2-201ENST00000377115 SHROOM2Q13796 1616 aa29.31■■■□□ 2.28
FOXA2-201ENST00000377115 MCM4P33991 863 aa29.3■■■□□ 2.28
FOXA2-201ENST00000377115 TET3O43151 1660 aa29.3■■■□□ 2.28
FOXA2-201ENST00000377115 UGGT1Q9NYU2 1555 aa29.3■■■□□ 2.28
FOXA2-201ENST00000377115 GOLGA6L3A6NEY3 463 aa29.29■■■□□ 2.28
FOXA2-201ENST00000377115 SLC24A1O60721 1099 aa29.29■■■□□ 2.28
FOXA2-201ENST00000377115 WDR63Q8IWG1 891 aa29.28■■■□□ 2.28
FOXA2-201ENST00000377115 PANK2Q9BZ23 570 aa29.28■■■□□ 2.28
FOXA2-201ENST00000377115 FSD2A1L4K1 749 aa29.28■■■□□ 2.28
FOXA2-201ENST00000377115 DEPDC5O75140 1603 aa29.27■■■□□ 2.28
FOXA2-201ENST00000377115 ZFYVE16Q7Z3T8 1539 aa29.27■■■□□ 2.28
FOXA2-201ENST00000377115 RTEL1-TNFRSF6BF6WH68 1400 aa29.26■■■□□ 2.27
FOXA2-201ENST00000377115 ERCC6L2Q5T890 1561 aa29.26■■■□□ 2.27
FOXA2-201ENST00000377115 MVPQ14764 893 aaKnown RBP29.25■■■□□ 2.27
FOXA2-201ENST00000377115 MYOM2P54296 1465 aa29.25■■■□□ 2.27
FOXA2-201ENST00000377115 MFAP1P55081 439 aaKnown RBP29.24■■■□□ 2.27
FOXA2-201ENST00000377115 C22orf23Q9BZE7 217 aa29.23■■■□□ 2.27
FOXA2-201ENST00000377115 SLC12A5Q9H2X9 1139 aa29.22■■■□□ 2.27
FOXA2-201ENST00000377115 MYO3AQ8NEV4 1616 aa29.2■■■□□ 2.27
FOXA2-201ENST00000377115 MTHFSP49914 203 aa29.2■■■□□ 2.27
FOXA2-201ENST00000377115 CHMP5Q9NZZ3 219 aa29.2■■■□□ 2.27
FOXA2-201ENST00000377115 KANK1Q14678 1352 aa29.2■■■□□ 2.26
FOXA2-201ENST00000377115 SBNO2Q9Y2G9 1366 aa29.19■■■□□ 2.26
FOXA2-201ENST00000377115 TRAK2O60296 914 aa29.19■■■□□ 2.26
FOXA2-201ENST00000377115 CCDC27Q2M243 656 aa29.19■■■□□ 2.26
FOXA2-201ENST00000377115 FTSJ3Q8IY81 847 aaKnown RBP29.19■■■□□ 2.26
FOXA2-201ENST00000377115 NEURL4Q96JN8 1562 aa29.18■■■□□ 2.26
FOXA2-201ENST00000377115 ZNF518AQ6AHZ1 1483 aa29.18■■■□□ 2.26
FOXA2-201ENST00000377115 CHD1O14646 1710 aa29.18■■■□□ 2.26
FOXA2-201ENST00000377115 VWDEQ8N2E2 1590 aa29.17■■■□□ 2.26
FOXA2-201ENST00000377115 KIF3BO15066 747 aa29.17■■■□□ 2.26
FOXA2-201ENST00000377115 ZKSCAN2Q63HK3 967 aa29.17■■■□□ 2.26
FOXA2-201ENST00000377115 MYH16Q9H6N6 1097 aa29.17■■■□□ 2.26
FOXA2-201ENST00000377115 DZIP1LQ8IYY4 767 aaKnown RBP29.16■■■□□ 2.26
FOXA2-201ENST00000377115 ZCCHC11Q5TAX3 1644 aaKnown RBP29.16■■■□□ 2.26
FOXA2-201ENST00000377115 TRAK1Q9UPV9 953 aa29.15■■■□□ 2.26
FOXA2-201ENST00000377115 IFT172Q9UG01 1749 aa29.14■■■□□ 2.26
FOXA2-201ENST00000377115 MROH2AA6NES4 1674 aa29.14■■■□□ 2.26
FOXA2-201ENST00000377115 TSR2Q969E8 191 aaKnown RBP29.13■■■□□ 2.25
FOXA2-201ENST00000377115 KIF1BO60333 1816 aa29.13■■■□□ 2.25
FOXA2-201ENST00000377115 CFAP53Q96M91 514 aa29.11■■■□□ 2.25
FOXA2-201ENST00000377115 U2AF1L5P0DN76 240 aaPredicted RBP29.1■■■□□ 2.25
FOXA2-201ENST00000377115 U2AF1Q01081 240 aaKnown RBP eCLIP29.1■■■□□ 2.25
FOXA2-201ENST00000377115 ZNF692Q9BU19 519 aaPredicted RBP29.1■■■□□ 2.25
FOXA2-201ENST00000377115 CLCN1P35523 988 aa29.1■■■□□ 2.25
FOXA2-201ENST00000377115 NAP1L5Q96NT1 182 aaPredicted RBP29.1■■■□□ 2.25
FOXA2-201ENST00000377115 PNNQ9H307 717 aaKnown RBP29.1■■■□□ 2.25
FOXA2-201ENST00000377115 NRXN1Q9ULB1 1477 aa29.1■■■□□ 2.25
FOXA2-201ENST00000377115 SMC4Q9NTJ3 1288 aa29.09■■■□□ 2.25
FOXA2-201ENST00000377115 TRIM27P14373 513 aa29.09■■■□□ 2.25
FOXA2-201ENST00000377115 HSCBQ8IWL3 235 aa29.09■■■□□ 2.25
FOXA2-201ENST00000377115 NOS1P29475 1434 aa29.08■■■□□ 2.25
FOXA2-201ENST00000377115 ATP7AQ04656 1500 aa29.08■■■□□ 2.25
FOXA2-201ENST00000377115 MRE11P49959 708 aa29.08■■■□□ 2.25
FOXA2-201ENST00000377115 HDAC1Q13547 482 aaPredicted RBP29.07■■■□□ 2.24
FOXA2-201ENST00000377115 ITPRIPQ8IWB1 547 aa29.07■■■□□ 2.24
FOXA2-201ENST00000377115 QRICH2Q9H0J4 1663 aa29.07■■■□□ 2.24
FOXA2-201ENST00000377115 MROH1Q8NDA8 1641 aa29.06■■■□□ 2.24
FOXA2-201ENST00000377115 ZC3H13Q5T200 1668 aaKnown RBP29.06■■■□□ 2.24
FOXA2-201ENST00000377115 EXOSC9Q06265 439 aaKnown RBP29.05■■■□□ 2.24
FOXA2-201ENST00000377115 GRPEL1Q9HAV7 217 aa29.04■■■□□ 2.24
FOXA2-201ENST00000377115 ADGRB2O60241 1585 aa29.04■■■□□ 2.24
FOXA2-201ENST00000377115 INO80Q9ULG1 1556 aaPredicted RBP29.04■■■□□ 2.24
FOXA2-201ENST00000377115 DDX11L8A8MPP1 907 aa29.03■■■□□ 2.24
FOXA2-201ENST00000377115 USP32Q8NFA0 1604 aa29.03■■■□□ 2.24
FOXA2-201ENST00000377115 CHGAP10645 457 aaKnown RBP29.03■■■□□ 2.24
FOXA2-201ENST00000377115 SSH1Q8WYL5 1049 aa29.03■■■□□ 2.24
FOXA2-201ENST00000377115 SETBP1Q9Y6X0 1596 aa29.02■■■□□ 2.24
FOXA2-201ENST00000377115 TMEM132EQ6IEE7 984 aa29.02■■■□□ 2.24
FOXA2-201ENST00000377115 DDX19BQ9UMR2 479 aa29.02■■■□□ 2.24
FOXA2-201ENST00000377115 NCOA3Q9Y6Q9 1424 aa29.02■■■□□ 2.24
FOXA2-201ENST00000377115 SMC5Q8IY18 1101 aa29.01■■■□□ 2.23
FOXA2-201ENST00000377115 DDIT3P35638 169 aa29.01■■■□□ 2.23
FOXA2-201ENST00000377115 EFCAB6Q5THR3 1501 aa29■■■□□ 2.23
FOXA2-201ENST00000377115 ATF7IPQ6VMQ6 1270 aa29■■■□□ 2.23
FOXA2-201ENST00000377115 CT47B1P0C2W7 299 aaPredicted RBP28.99■■■□□ 2.23
FOXA2-201ENST00000377115 NCBP3Q53F19 620 aaKnown RBP28.99■■■□□ 2.23
FOXA2-201ENST00000377115 NOB1Q9ULX3 412 aaKnown RBP28.99■■■□□ 2.23
FOXA2-201ENST00000377115 TMEM57Q8N5G2 664 aa28.98■■■□□ 2.23
FOXA2-201ENST00000377115 CD109Q6YHK3 1445 aa28.97■■■□□ 2.23
FOXA2-201ENST00000377115 ADGRL1O94910 1474 aa28.97■■■□□ 2.23
FOXA2-201ENST00000377115 PPRC1Q5VV67 1664 aaKnown RBP28.97■■■□□ 2.23
FOXA2-201ENST00000377115 ADGRB3O60242 1522 aa28.96■■■□□ 2.23
FOXA2-201ENST00000377115 ARAP3Q8WWN8 1544 aa28.96■■■□□ 2.23
FOXA2-201ENST00000377115 RBM25P49756 843 aaKnown RBP28.95■■■□□ 2.23
FOXA2-201ENST00000377115 TNPO1Q92973 898 aaKnown RBP28.95■■■□□ 2.23
FOXA2-201ENST00000377115 ADGRB1O14514 1584 aa28.95■■■□□ 2.23
FOXA2-201ENST00000377115 ERBB4Q15303 1308 aa28.95■■■□□ 2.22
FOXA2-201ENST00000377115 C14orf93Q9H972 538 aaKnown RBP28.95■■■□□ 2.22
FOXA2-201ENST00000377115 TRIM35Q9UPQ4 493 aa28.94■■■□□ 2.22
FOXA2-201ENST00000377115 U2SURPO15042 1029 aaKnown RBP28.93■■■□□ 2.22
FOXA2-201ENST00000377115 LNPKQ9C0E8 428 aa28.93■■■□□ 2.22
FOXA2-201ENST00000377115 ZBTB40Q9NUA8 1239 aa28.93■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms