RNA–Protein interactions for RNA: ENST00000376806.9

HLA-A-202, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 1,854 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-202ENST00000376806 SMG6Q86US8 1419 aaKnown RBP22.6■■□□□ 1.21
HLA-A-202ENST00000376806 NLRP1Q9C000 1473 aa22.6■■□□□ 1.21
HLA-A-202ENST00000376806 SAFB2Q14151 953 aaKnown RBP eCLIP22.58■■□□□ 1.21
HLA-A-202ENST00000376806 PRAM1Q96QH2 718 aa22.57■■□□□ 1.2
HLA-A-202ENST00000376806 SLC12A5Q9H2X9 1139 aa22.57■■□□□ 1.2
HLA-A-202ENST00000376806 ANKRD36BQ8N2N9 1353 aa22.56■■□□□ 1.2
HLA-A-202ENST00000376806 NINLQ9Y2I6 1382 aa22.56■■□□□ 1.2
HLA-A-202ENST00000376806 TMEM2Q9UHN6 1383 aa22.55■■□□□ 1.2
HLA-A-202ENST00000376806 POGKQ9P215 609 aa22.55■■□□□ 1.2
HLA-A-202ENST00000376806 CABP2Q9NPB3 220 aa22.54■■□□□ 1.2
HLA-A-202ENST00000376806 ATAD2Q6PL18 1390 aa22.53■■□□□ 1.2
HLA-A-202ENST00000376806 MINK1Q8N4C8 1332 aaPredicted RBP22.53■■□□□ 1.2
HLA-A-202ENST00000376806 SETD1BQ9UPS6 1966 aaKnown RBP22.52■■□□□ 1.2
HLA-A-202ENST00000376806 ANKRD26Q9UPS8 1709 aa22.52■■□□□ 1.2
HLA-A-202ENST00000376806 NUDCQ9Y266 331 aa22.52■■□□□ 1.2
HLA-A-202ENST00000376806 CPS1P31327 1500 aa22.52■■□□□ 1.2
HLA-A-202ENST00000376806 ABCC11Q96J66 1382 aa22.52■■□□□ 1.2
HLA-A-202ENST00000376806 SENP3-EIF4A1A0A087X0R7 540 aa22.51■■□□□ 1.19
HLA-A-202ENST00000376806 HDGFP51858 240 aaKnown RBP22.51■■□□□ 1.19
HLA-A-202ENST00000376806 SRPK2P78362 688 aaKnown RBP22.49■■□□□ 1.19
HLA-A-202ENST00000376806 METP08581 1390 aa22.49■■□□□ 1.19
HLA-A-202ENST00000376806 TECPR2O15040 1411 aa22.49■■□□□ 1.19
HLA-A-202ENST00000376806 CEP170BQ9Y4F5 1589 aaPredicted RBP22.48■■□□□ 1.19
HLA-A-202ENST00000376806 BCANQ96GW7 911 aa22.48■■□□□ 1.19
HLA-A-202ENST00000376806 NSD2O96028 1365 aa22.48■■□□□ 1.19
HLA-A-202ENST00000376806 SLIT1O75093 1534 aa22.47■■□□□ 1.19
HLA-A-202ENST00000376806 A0A1W2PP64 1363 aa22.47■■□□□ 1.19
HLA-A-202ENST00000376806 PLEKHH1Q9ULM0 1364 aa22.47■■□□□ 1.19
HLA-A-202ENST00000376806 CGNL1Q0VF96 1302 aa22.47■■□□□ 1.19
HLA-A-202ENST00000376806 SHPRHQ149N8 1683 aa22.47■■□□□ 1.19
HLA-A-202ENST00000376806 KIF20BQ96Q89 1820 aa22.47■■□□□ 1.19
HLA-A-202ENST00000376806 WDR43Q15061 677 aaKnown RBP eCLIP22.46■■□□□ 1.19
HLA-A-202ENST00000376806 CD163L1Q9NR16 1453 aa22.46■■□□□ 1.19
HLA-A-202ENST00000376806 ARHGAP23Q9P227 1491 aa22.45■■□□□ 1.19
HLA-A-202ENST00000376806 PLEKHG1Q9ULL1 1385 aa22.45■■□□□ 1.19
HLA-A-202ENST00000376806 ADAMTS13Q76LX8 1427 aa22.45■■□□□ 1.18
HLA-A-202ENST00000376806 ADAMTS8Q9UP79 889 aa22.45■■□□□ 1.18
HLA-A-202ENST00000376806 FAM135BQ49AJ0 1406 aa22.44■■□□□ 1.18
HLA-A-202ENST00000376806 MORC1Q86VD1 984 aa22.43■■□□□ 1.18
HLA-A-202ENST00000376806 POLR3AO14802 1390 aaPredicted RBP22.43■■□□□ 1.18
HLA-A-202ENST00000376806 ZNF142P52746 1687 aaPredicted RBP22.43■■□□□ 1.18
HLA-A-202ENST00000376806 THEMISQ8N1K5 641 aaPredicted RBP22.43■■□□□ 1.18
HLA-A-202ENST00000376806 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
HLA-A-202ENST00000376806 CDK19Q9BWU1 502 aa22.42■■□□□ 1.18
HLA-A-202ENST00000376806 LTKP29376 864 aa22.41■■□□□ 1.18
HLA-A-202ENST00000376806 PDE3BQ13370 1112 aa22.41■■□□□ 1.18
HLA-A-202ENST00000376806 IRX6P78412 446 aaPredicted RBP22.4■■□□□ 1.18
HLA-A-202ENST00000376806 MED14O60244 1454 aa22.4■■□□□ 1.18
HLA-A-202ENST00000376806 ATP7BP35670 1465 aa22.4■■□□□ 1.18
HLA-A-202ENST00000376806 TERF2IPQ9NYB0 399 aa22.39■■□□□ 1.17
HLA-A-202ENST00000376806 SALL2Q9Y467 1007 aaPredicted RBP22.39■■□□□ 1.17
HLA-A-202ENST00000376806 ADGRB2O60241 1585 aa22.38■■□□□ 1.17
HLA-A-202ENST00000376806 SIRT1Q96EB6 747 aa22.38■■□□□ 1.17
HLA-A-202ENST00000376806 HSPA2P54652 639 aa22.37■■□□□ 1.17
HLA-A-202ENST00000376806 DIP2AQ14689 1571 aa22.37■■□□□ 1.17
HLA-A-202ENST00000376806 LMTK3Q96Q04 1460 aa22.37■■□□□ 1.17
HLA-A-202ENST00000376806 ERICH6BQ5W0A0 696 aa22.37■■□□□ 1.17
HLA-A-202ENST00000376806 TXNDC2Q86VQ3 553 aa22.36■■□□□ 1.17
HLA-A-202ENST00000376806 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
HLA-A-202ENST00000376806 ITSN1Q15811 1721 aa22.36■■□□□ 1.17
HLA-A-202ENST00000376806 AKAP12Q02952 1782 aa22.35■■□□□ 1.17
HLA-A-202ENST00000376806 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.35■■□□□ 1.17
HLA-A-202ENST00000376806 RNF123Q5XPI4 1314 aa22.35■■□□□ 1.17
HLA-A-202ENST00000376806 MON2Q7Z3U7 1717 aa22.34■■□□□ 1.17
HLA-A-202ENST00000376806 EID1Q9Y6B2 187 aa22.34■■□□□ 1.17
HLA-A-202ENST00000376806 TNNT2P45379 298 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-202ENST00000376806 HDGFL2Q7Z4V5 671 aaPredicted RBP22.33■■□□□ 1.17
HLA-A-202ENST00000376806 CDC42BPGQ6DT37 1551 aa22.32■■□□□ 1.16
HLA-A-202ENST00000376806 ROBO2Q9HCK4 1378 aa22.32■■□□□ 1.16
HLA-A-202ENST00000376806 TOPAZ1Q8N9V7 1692 aa22.32■■□□□ 1.16
HLA-A-202ENST00000376806 WASLO00401 505 aaPredicted RBP22.32■■□□□ 1.16
HLA-A-202ENST00000376806 CABP1Q9NZU7 370 aa22.32■■□□□ 1.16
HLA-A-202ENST00000376806 PPIP5K1Q6PFW1 1433 aa22.3■■□□□ 1.16
HLA-A-202ENST00000376806 PTPRUQ92729 1446 aa22.3■■□□□ 1.16
HLA-A-202ENST00000376806 XRN1Q8IZH2 1706 aaKnown RBP22.29■■□□□ 1.16
HLA-A-202ENST00000376806 NCKAP5LQ9HCH0 1330 aa22.29■■□□□ 1.16
HLA-A-202ENST00000376806 ANKLE2Q86XL3 938 aa22.28■■□□□ 1.16
HLA-A-202ENST00000376806 CDCA7LQ96GN5 454 aa22.28■■□□□ 1.16
HLA-A-202ENST00000376806 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
HLA-A-202ENST00000376806 MTHFSP49914 203 aa22.27■■□□□ 1.16
HLA-A-202ENST00000376806 GGNBP2Q9H3C7 697 aa22.27■■□□□ 1.16
HLA-A-202ENST00000376806 CPSF1Q10570 1443 aaKnown RBP22.27■■□□□ 1.16
HLA-A-202ENST00000376806 ZNF521Q96K83 1311 aa22.27■■□□□ 1.16
HLA-A-202ENST00000376806 CFAP53Q96M91 514 aa22.26■■□□□ 1.15
HLA-A-202ENST00000376806 FYB1O15117 783 aa22.26■■□□□ 1.15
HLA-A-202ENST00000376806 PTCH1Q13635 1447 aa22.26■■□□□ 1.15
HLA-A-202ENST00000376806 COL3A1P02461 1466 aaPredicted RBP22.25■■□□□ 1.15
HLA-A-202ENST00000376806 EDC4Q6P2E9 1401 aaKnown RBP22.24■■□□□ 1.15
HLA-A-202ENST00000376806 SLC26A8Q96RN1 970 aa22.24■■□□□ 1.15
HLA-A-202ENST00000376806 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
HLA-A-202ENST00000376806 PPP4R2Q9NY27 417 aa22.24■■□□□ 1.15
HLA-A-202ENST00000376806 RCAN3Q9UKA8 241 aa22.23■■□□□ 1.15
HLA-A-202ENST00000376806 TBX22Q9Y458 520 aa22.23■■□□□ 1.15
HLA-A-202ENST00000376806 NRKQ7Z2Y5 1582 aa22.22■■□□□ 1.15
HLA-A-202ENST00000376806 NUDT16Q96DE0 195 aaKnown RBP22.22■■□□□ 1.15
HLA-A-202ENST00000376806 APAF1O14727 1248 aa22.21■■□□□ 1.15
HLA-A-202ENST00000376806 MAP2P11137 1827 aaKnown RBP22.2■■□□□ 1.14
HLA-A-202ENST00000376806 NGEFQ8N5V2 710 aa22.2■■□□□ 1.14
HLA-A-202ENST00000376806 PRR36Q9H6K5 1346 aa22.19■■□□□ 1.14
HLA-A-202ENST00000376806 CCDC61Q9Y6R9 512 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms