RNA–Protein interactions for RNA: ENST00000376724.6

TRIM40-206, Transcript of tripartite motif containing 40, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRIM40, Length 2,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-206ENST00000376724 SETD1AO15047 1707 aaKnown RBP17.41■□□□□ 0.38
TRIM40-206ENST00000376724 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
TRIM40-206ENST00000376724 TXNDC2Q86VQ3 553 aa17.41■□□□□ 0.38
TRIM40-206ENST00000376724 ZBED9Q6R2W3 1325 aa17.41■□□□□ 0.38
TRIM40-206ENST00000376724 PUS7Q96PZ0 661 aaKnown RBP17.4■□□□□ 0.38
TRIM40-206ENST00000376724 NSD3Q9BZ95 1437 aa17.4■□□□□ 0.38
TRIM40-206ENST00000376724 NPC1L1Q9UHC9 1359 aa17.39■□□□□ 0.37
TRIM40-206ENST00000376724 PLEKHH1Q9ULM0 1364 aa17.39■□□□□ 0.37
TRIM40-206ENST00000376724 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
TRIM40-206ENST00000376724 CDK19Q9BWU1 502 aa17.38■□□□□ 0.37
TRIM40-206ENST00000376724 ABCC11Q96J66 1382 aa17.38■□□□□ 0.37
TRIM40-206ENST00000376724 RIMS1Q86UR5 1692 aaKnown RBP17.36■□□□□ 0.37
TRIM40-206ENST00000376724 DLC1Q96QB1 1528 aa17.36■□□□□ 0.37
TRIM40-206ENST00000376724 THEMISQ8N1K5 641 aaPredicted RBP17.36■□□□□ 0.37
TRIM40-206ENST00000376724 SLC26A8Q96RN1 970 aa17.35■□□□□ 0.37
TRIM40-206ENST00000376724 PLEKHG1Q9ULL1 1385 aa17.35■□□□□ 0.37
TRIM40-206ENST00000376724 ATAD2Q6PL18 1390 aa17.34■□□□□ 0.37
TRIM40-206ENST00000376724 ANKRD36BQ8N2N9 1353 aa17.34■□□□□ 0.37
TRIM40-206ENST00000376724 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.37
TRIM40-206ENST00000376724 TNNT2P45379 298 aaPredicted RBP17.33■□□□□ 0.36
TRIM40-206ENST00000376724 MORC1Q86VD1 984 aa17.33■□□□□ 0.36
TRIM40-206ENST00000376724 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
TRIM40-206ENST00000376724 SALL2Q9Y467 1007 aaPredicted RBP17.32■□□□□ 0.36
TRIM40-206ENST00000376724 SLIT1O75093 1534 aa17.31■□□□□ 0.36
TRIM40-206ENST00000376724 A0A1W2PP64 1363 aa17.31■□□□□ 0.36
TRIM40-206ENST00000376724 SUPT16HQ9Y5B9 1047 aaKnown RBP17.31■□□□□ 0.36
TRIM40-206ENST00000376724 NINLQ9Y2I6 1382 aa17.31■□□□□ 0.36
TRIM40-206ENST00000376724 CABP1Q9NZU7 370 aa17.3■□□□□ 0.36
TRIM40-206ENST00000376724 ARHGAP23Q9P227 1491 aa17.3■□□□□ 0.36
TRIM40-206ENST00000376724 FKBP8Q14318 412 aa17.3■□□□□ 0.36
TRIM40-206ENST00000376724 WDR43Q15061 677 aaKnown RBP eCLIP17.3■□□□□ 0.36
TRIM40-206ENST00000376724 TERF2IPQ9NYB0 399 aa17.3■□□□□ 0.36
TRIM40-206ENST00000376724 ADAMTS8Q9UP79 889 aa17.3■□□□□ 0.36
TRIM40-206ENST00000376724 NEFLP07196 543 aa17.29■□□□□ 0.36
TRIM40-206ENST00000376724 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
TRIM40-206ENST00000376724 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
TRIM40-206ENST00000376724 SIRT1Q96EB6 747 aa17.28■□□□□ 0.36
TRIM40-206ENST00000376724 ROBO2Q9HCK4 1378 aa17.28■□□□□ 0.36
TRIM40-206ENST00000376724 ADAMTSL3P82987 1691 aa17.27■□□□□ 0.36
TRIM40-206ENST00000376724 TECPR2O15040 1411 aa17.27■□□□□ 0.36
TRIM40-206ENST00000376724 HDGFL2Q7Z4V5 671 aaPredicted RBP17.27■□□□□ 0.36
TRIM40-206ENST00000376724 KNDC1Q76NI1 1749 aa17.27■□□□□ 0.36
TRIM40-206ENST00000376724 CEP170BQ9Y4F5 1589 aaPredicted RBP17.27■□□□□ 0.35
TRIM40-206ENST00000376724 CPS1P31327 1500 aa17.26■□□□□ 0.35
TRIM40-206ENST00000376724 USP32Q8NFA0 1604 aa17.26■□□□□ 0.35
TRIM40-206ENST00000376724 MED14O60244 1454 aa17.25■□□□□ 0.35
TRIM40-206ENST00000376724 CD163L1Q9NR16 1453 aa17.25■□□□□ 0.35
TRIM40-206ENST00000376724 GGNBP2Q9H3C7 697 aa17.25■□□□□ 0.35
TRIM40-206ENST00000376724 AMOTL2Q9Y2J4 779 aa17.25■□□□□ 0.35
TRIM40-206ENST00000376724 TBX22Q9Y458 520 aa17.25■□□□□ 0.35
TRIM40-206ENST00000376724 PTPRUQ92729 1446 aa17.24■□□□□ 0.35
TRIM40-206ENST00000376724 BLMP54132 1417 aaPredicted RBP17.23■□□□□ 0.35
TRIM40-206ENST00000376724 NUDT16Q96DE0 195 aaKnown RBP17.23■□□□□ 0.35
TRIM40-206ENST00000376724 NCKAP5LQ9HCH0 1330 aa17.22■□□□□ 0.35
TRIM40-206ENST00000376724 NSD2O96028 1365 aa17.22■□□□□ 0.35
TRIM40-206ENST00000376724 NUDCQ9Y266 331 aa17.21■□□□□ 0.35
TRIM40-206ENST00000376724 PPIP5K1Q6PFW1 1433 aa17.21■□□□□ 0.35
TRIM40-206ENST00000376724 FYB1O15117 783 aa17.21■□□□□ 0.35
TRIM40-206ENST00000376724 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRIM40-206ENST00000376724 INSRP06213 1382 aa17.21■□□□□ 0.34
TRIM40-206ENST00000376724 SMG6Q86US8 1419 aaKnown RBP17.2■□□□□ 0.34
TRIM40-206ENST00000376724 NUTM2FA1L443 756 aa17.2■□□□□ 0.34
TRIM40-206ENST00000376724 MTHFSP49914 203 aa17.2■□□□□ 0.34
TRIM40-206ENST00000376724 IRX6P78412 446 aaPredicted RBP17.2■□□□□ 0.34
TRIM40-206ENST00000376724 ANKLE2Q86XL3 938 aa17.2■□□□□ 0.34
TRIM40-206ENST00000376724 CCDC146Q8IYE0 955 aa17.2■□□□□ 0.34
TRIM40-206ENST00000376724 CCDC61Q9Y6R9 512 aa17.19■□□□□ 0.34
TRIM40-206ENST00000376724 POLR3AO14802 1390 aaPredicted RBP17.19■□□□□ 0.34
TRIM40-206ENST00000376724 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.18■□□□□ 0.34
TRIM40-206ENST00000376724 ATP7BP35670 1465 aa17.18■□□□□ 0.34
TRIM40-206ENST00000376724 DIP2AQ14689 1571 aa17.17■□□□□ 0.34
TRIM40-206ENST00000376724 PRR36Q9H6K5 1346 aa17.16■□□□□ 0.34
TRIM40-206ENST00000376724 CFAP53Q96M91 514 aa17.16■□□□□ 0.34
TRIM40-206ENST00000376724 ZNF142P52746 1687 aaPredicted RBP17.15■□□□□ 0.34
TRIM40-206ENST00000376724 KCNA6P17658 529 aa17.14■□□□□ 0.34
TRIM40-206ENST00000376724 CDCA7LQ96GN5 454 aa17.14■□□□□ 0.34
TRIM40-206ENST00000376724 SETD1BQ9UPS6 1966 aaKnown RBP17.14■□□□□ 0.33
TRIM40-206ENST00000376724 CPSF1Q10570 1443 aaKnown RBP17.14■□□□□ 0.33
TRIM40-206ENST00000376724 PDE3BQ13370 1112 aa17.13■□□□□ 0.33
TRIM40-206ENST00000376724 PTCH1Q13635 1447 aa17.13■□□□□ 0.33
TRIM40-206ENST00000376724 ADGRB2O60241 1585 aa17.12■□□□□ 0.33
TRIM40-206ENST00000376724 KIF20BQ96Q89 1820 aa17.12■□□□□ 0.33
TRIM40-206ENST00000376724 APAF1O14727 1248 aa17.11■□□□□ 0.33
TRIM40-206ENST00000376724 CDC42BPGQ6DT37 1551 aa17.11■□□□□ 0.33
TRIM40-206ENST00000376724 EDC4Q6P2E9 1401 aaKnown RBP17.11■□□□□ 0.33
TRIM40-206ENST00000376724 ANKRD26Q9UPS8 1709 aa17.11■□□□□ 0.33
TRIM40-206ENST00000376724 NME9Q86XW9 330 aa17.11■□□□□ 0.33
TRIM40-206ENST00000376724 FBLN1P23142 703 aa17.1■□□□□ 0.33
TRIM40-206ENST00000376724 SHPRHQ149N8 1683 aa17.1■□□□□ 0.33
TRIM40-206ENST00000376724 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
TRIM40-206ENST00000376724 ZRANB1Q9UGI0 708 aa17.09■□□□□ 0.33
TRIM40-206ENST00000376724 XRN1Q8IZH2 1706 aaKnown RBP17.09■□□□□ 0.33
TRIM40-206ENST00000376724 ZNF692Q9BU19 519 aaPredicted RBP17.09■□□□□ 0.33
TRIM40-206ENST00000376724 ACEP12821 1306 aa17.09■□□□□ 0.33
TRIM40-206ENST00000376724 PPM1GO15355 546 aaPredicted RBP17.08■□□□□ 0.32
TRIM40-206ENST00000376724 RBM33Q96EV2 1170 aaKnown RBP17.08■□□□□ 0.32
TRIM40-206ENST00000376724 U2AF1L5P0DN76 240 aaPredicted RBP17.07■□□□□ 0.32
TRIM40-206ENST00000376724 U2AF1Q01081 240 aaKnown RBP eCLIP17.07■□□□□ 0.32
TRIM40-206ENST00000376724 PMFBP1Q8TBY8 1022 aa17.07■□□□□ 0.32
TRIM40-206ENST00000376724 ITSN1Q15811 1721 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms