RNA–Protein interactions for RNA: ENST00000376057.8

PDPN-202, Transcript of podoplanin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PDPN, Length 2,801 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-202ENST00000376057 XRN1Q8IZH2 1706 aaKnown RBP15.18■□□□□ 0.02
PDPN-202ENST00000376057 PTCH1Q13635 1447 aa15.18■□□□□ 0.02
PDPN-202ENST00000376057 INSRP06213 1382 aa15.17■□□□□ 0.02
PDPN-202ENST00000376057 PRAM1Q96QH2 718 aa15.17■□□□□ 0.02
PDPN-202ENST00000376057 AMER1Q5JTC6 1135 aaPredicted RBP15.16■□□□□ 0.02
PDPN-202ENST00000376057 ANKRD36BQ8N2N9 1353 aa15.15■□□□□ 0.02
PDPN-202ENST00000376057 KNSTRNQ9Y448 316 aa15.15■□□□□ 0.02
PDPN-202ENST00000376057 POGKQ9P215 609 aa15.15■□□□□ 0.02
PDPN-202ENST00000376057 STK26Q9P289 416 aa15.14■□□□□ 0.01
PDPN-202ENST00000376057 NSD2O96028 1365 aa15.13■□□□□ 0.01
PDPN-202ENST00000376057 NLRP13Q86W25 1043 aa15.13■□□□□ 0.01
PDPN-202ENST00000376057 PTPRUQ92729 1446 aa15.13■□□□□ 0.01
PDPN-202ENST00000376057 ATP7BP35670 1465 aa15.12■□□□□ 0.01
PDPN-202ENST00000376057 CHD2O14647 1828 aaKnown RBP15.12■□□□□ 0.01
PDPN-202ENST00000376057 ANKLE2Q86XL3 938 aa15.11■□□□□ 0.01
PDPN-202ENST00000376057 CARD14Q9BXL6 1004 aa15.11■□□□□ 0.01
PDPN-202ENST00000376057 MRS2Q9HD23 443 aa15.11■□□□□ 0.01
PDPN-202ENST00000376057 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.1■□□□□ 0.01
PDPN-202ENST00000376057 ROBO2Q9HCK4 1378 aa15.1■□□□□ 0.01
PDPN-202ENST00000376057 PLEKHH1Q9ULM0 1364 aa15.1■□□□□ 0.01
PDPN-202ENST00000376057 CD163L1Q9NR16 1453 aa15.1■□□□□ 0.01
PDPN-202ENST00000376057 ANKRD26Q9UPS8 1709 aa15.09■□□□□ 0.01
PDPN-202ENST00000376057 TOPAZ1Q8N9V7 1692 aa15.09■□□□□ 0.01
PDPN-202ENST00000376057 CCDC184Q52MB2 194 aa15.09■□□□□ 0.01
PDPN-202ENST00000376057 YTHDC1Q96MU7 727 aaKnown RBP15.09■□□□□ 0.01
PDPN-202ENST00000376057 CDK19Q9BWU1 502 aa15.09■□□□□ 0.01
PDPN-202ENST00000376057 WASLO00401 505 aaPredicted RBP15.08■□□□□ 0
PDPN-202ENST00000376057 PNISRQ8TF01 805 aaKnown RBP15.08■□□□□ 0
PDPN-202ENST00000376057 NWD1Q149M9 1564 aa15.07■□□□□ 0
PDPN-202ENST00000376057 MINK1Q8N4C8 1332 aaPredicted RBP15.07■□□□□ 0
PDPN-202ENST00000376057 PELP1Q8IZL8 1130 aaKnown RBP15.07■□□□□ 0
PDPN-202ENST00000376057 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
PDPN-202ENST00000376057 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
PDPN-202ENST00000376057 WAPLQ7Z5K2 1190 aa15.07■□□□□ 0
PDPN-202ENST00000376057 CGNL1Q0VF96 1302 aa15.06■□□□□ 0
PDPN-202ENST00000376057 CABP2Q9NPB3 220 aa15.06■□□□□ 0
PDPN-202ENST00000376057 AKAP12Q02952 1782 aa15.06■□□□□ 0
PDPN-202ENST00000376057 BCANQ96GW7 911 aa15.06■□□□□ 0
PDPN-202ENST00000376057 TERF2IPQ9NYB0 399 aa15.06■□□□□ 0
PDPN-202ENST00000376057 NPHP4O75161 1426 aaPredicted RBP15.05■□□□□ 0
PDPN-202ENST00000376057 CPSF1Q10570 1443 aaKnown RBP15.05■□□□□ 0
PDPN-202ENST00000376057 CDC42BPGQ6DT37 1551 aa15.05■□□□□ 0
PDPN-202ENST00000376057 SRPK2P78362 688 aaKnown RBP15.05■□□□□ 0
PDPN-202ENST00000376057 TMC1Q8TDI8 760 aa15.05■□□□□ 0
PDPN-202ENST00000376057 MON2Q7Z3U7 1717 aa15.04■□□□□ -0
PDPN-202ENST00000376057 AMOTL2Q9Y2J4 779 aa15.04■□□□□ -0
PDPN-202ENST00000376057 A0A1W2PP64 1363 aa15.04■□□□□ -0
PDPN-202ENST00000376057 ITSN1Q15811 1721 aa15.04■□□□□ -0
PDPN-202ENST00000376057 KIF20BQ96Q89 1820 aa15.03■□□□□ -0
PDPN-202ENST00000376057 PPP2R1AP30153 589 aa15.03■□□□□ -0
PDPN-202ENST00000376057 CC2D1BQ5T0F9 858 aaKnown RBP15.03■□□□□ -0
PDPN-202ENST00000376057 SAFB2Q14151 953 aaKnown RBP eCLIP15.02■□□□□ -0
PDPN-202ENST00000376057 SLC26A8Q96RN1 970 aa15.02■□□□□ -0
PDPN-202ENST00000376057 ANKARQ7Z5J8 1434 aa15.02□□□□□ -0.01
PDPN-202ENST00000376057 HDGFL2Q7Z4V5 671 aaPredicted RBP15.01□□□□□ -0.01
PDPN-202ENST00000376057 FMN2Q9NZ56 1722 aa15□□□□□ -0.01
PDPN-202ENST00000376057 POLR3AO14802 1390 aaPredicted RBP15□□□□□ -0.01
PDPN-202ENST00000376057 PPIP5K1Q6PFW1 1433 aa15□□□□□ -0.01
PDPN-202ENST00000376057 PLPPR3Q6T4P5 718 aa15□□□□□ -0.01
PDPN-202ENST00000376057 ZBED9Q6R2W3 1325 aa15□□□□□ -0.01
PDPN-202ENST00000376057 EDC4Q6P2E9 1401 aaKnown RBP14.99□□□□□ -0.01
PDPN-202ENST00000376057 CCDC61Q9Y6R9 512 aa14.99□□□□□ -0.01
PDPN-202ENST00000376057 NRKQ7Z2Y5 1582 aa14.99□□□□□ -0.01
PDPN-202ENST00000376057 BLMP54132 1417 aaPredicted RBP14.99□□□□□ -0.01
PDPN-202ENST00000376057 PLEKHG3A1L390 1219 aa14.98□□□□□ -0.01
PDPN-202ENST00000376057 NUDT16Q96DE0 195 aaKnown RBP14.98□□□□□ -0.01
PDPN-202ENST00000376057 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
PDPN-202ENST00000376057 CABP1Q9NZU7 370 aa14.98□□□□□ -0.01
PDPN-202ENST00000376057 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
PDPN-202ENST00000376057 SCAF1Q9H7N4 1312 aaKnown RBP14.97□□□□□ -0.01
PDPN-202ENST00000376057 NKTRP30414 1462 aaKnown RBP14.97□□□□□ -0.01
PDPN-202ENST00000376057 FAM9BQ8IZU0 186 aa14.96□□□□□ -0.01
PDPN-202ENST00000376057 NALCNQ8IZF0 1738 aa14.96□□□□□ -0.01
PDPN-202ENST00000376057 NCOA3Q9Y6Q9 1424 aa14.96□□□□□ -0.01
PDPN-202ENST00000376057 KCNA6P17658 529 aa14.96□□□□□ -0.02
PDPN-202ENST00000376057 PRR36Q9H6K5 1346 aa14.94□□□□□ -0.02
PDPN-202ENST00000376057 KDM4FA0A1W2PPD8 638 aa14.94□□□□□ -0.02
PDPN-202ENST00000376057 HNRNPUQ00839 825 aaKnown RBP eCLIP14.94□□□□□ -0.02
PDPN-202ENST00000376057 MORC1Q86VD1 984 aa14.94□□□□□ -0.02
PDPN-202ENST00000376057 USP54Q70EL1 1684 aa14.94□□□□□ -0.02
PDPN-202ENST00000376057 SHPRHQ149N8 1683 aa14.93□□□□□ -0.02
PDPN-202ENST00000376057 FYB1O15117 783 aa14.93□□□□□ -0.02
PDPN-202ENST00000376057 ADGRL3Q9HAR2 1447 aa14.93□□□□□ -0.02
PDPN-202ENST00000376057 SSH2Q76I76 1423 aa14.93□□□□□ -0.02
PDPN-202ENST00000376057 LMTK3Q96Q04 1460 aa14.92□□□□□ -0.02
PDPN-202ENST00000376057 LRRC7Q96NW7 1537 aa14.91□□□□□ -0.02
PDPN-202ENST00000376057 SMG6Q86US8 1419 aaKnown RBP14.91□□□□□ -0.02
PDPN-202ENST00000376057 AATKQ6ZMQ8 1374 aa14.9□□□□□ -0.02
PDPN-202ENST00000376057 NCKAP5LQ9HCH0 1330 aa14.9□□□□□ -0.02
PDPN-202ENST00000376057 NGEFQ8N5V2 710 aa14.89□□□□□ -0.03
PDPN-202ENST00000376057 USP6P35125 1406 aa14.89□□□□□ -0.03
PDPN-202ENST00000376057 STRCQ7RTU9 1775 aa14.89□□□□□ -0.03
PDPN-202ENST00000376057 PNPLA6Q8IY17 1366 aa14.89□□□□□ -0.03
PDPN-202ENST00000376057 NCBP3Q53F19 620 aaKnown RBP14.88□□□□□ -0.03
PDPN-202ENST00000376057 RGPD8O14715 1765 aaPredicted RBP14.88□□□□□ -0.03
PDPN-202ENST00000376057 CNGB1Q14028 1251 aaPredicted RBP14.88□□□□□ -0.03
PDPN-202ENST00000376057 COL3A1P02461 1466 aaPredicted RBP14.88□□□□□ -0.03
PDPN-202ENST00000376057 TTC21AQ8NDW8 1320 aa14.87□□□□□ -0.03
PDPN-202ENST00000376057 DCCP43146 1447 aa14.87□□□□□ -0.03
PDPN-202ENST00000376057 PDE3BQ13370 1112 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms