RNA–Protein interactions for RNA: ENST00000375290.6

PTCH1-204, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 10,631 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-204ENST00000375290 RASSF8Q8NHQ8 419 aa12.24□□□□□ -0.45
PTCH1-204ENST00000375290 OLFM4Q6UX06 510 aa12.24□□□□□ -0.45
PTCH1-204ENST00000375290 AKAP17AQ02040 695 aaKnown RBP12.24□□□□□ -0.45
PTCH1-204ENST00000375290 PRXQ9BXM0 1461 aa12.24□□□□□ -0.45
PTCH1-204ENST00000375290 GBP3Q9H0R5 595 aa12.24□□□□□ -0.45
PTCH1-204ENST00000375290 TUBB4BP68371 445 aa12.24□□□□□ -0.45
PTCH1-204ENST00000375290 THOC2Q8NI27 1593 aaKnown RBP12.23□□□□□ -0.45
PTCH1-204ENST00000375290 KIAA1107Q9UPP5 1409 aa12.23□□□□□ -0.45
PTCH1-204ENST00000375290 BICD2Q8TD16 824 aa12.23□□□□□ -0.45
PTCH1-204ENST00000375290 COG6Q9Y2V7 657 aa12.23□□□□□ -0.45
PTCH1-204ENST00000375290 DDX58O95786 925 aaKnown RBP12.22□□□□□ -0.45
PTCH1-204ENST00000375290 XBP1P17861 261 aa12.22□□□□□ -0.45
PTCH1-204ENST00000375290 CCDC112Q8NEF3 446 aa12.22□□□□□ -0.45
PTCH1-204ENST00000375290 CBFA2T2O43439 604 aa12.22□□□□□ -0.45
PTCH1-204ENST00000375290 GNAI3P08754 354 aa12.22□□□□□ -0.45
PTCH1-204ENST00000375290 KINO60870 393 aaKnown RBP12.22□□□□□ -0.45
PTCH1-204ENST00000375290 SAFBQ15424 915 aaKnown RBP eCLIP12.22□□□□□ -0.45
PTCH1-204ENST00000375290 MCTP1Q6DN14 999 aa12.22□□□□□ -0.45
PTCH1-204ENST00000375290 ZNF396Q96N95 335 aaPredicted RBP12.22□□□□□ -0.45
PTCH1-204ENST00000375290 PRIMPOLQ96LW4 560 aa12.22□□□□□ -0.45
PTCH1-204ENST00000375290 HMGXB3Q12766 1538 aa12.21□□□□□ -0.45
PTCH1-204ENST00000375290 CALCOCO1Q9P1Z2 691 aa12.21□□□□□ -0.45
PTCH1-204ENST00000375290 DYNC1I1O14576 645 aa12.21□□□□□ -0.45
PTCH1-204ENST00000375290 ERC1Q8IUD2 1116 aa12.21□□□□□ -0.45
PTCH1-204ENST00000375290 TRDNQ13061 729 aa12.21□□□□□ -0.45
PTCH1-204ENST00000375290 RRP12Q5JTH9 1297 aaKnown RBP12.21□□□□□ -0.45
PTCH1-204ENST00000375290 K7ELQ4 463 aaPredicted RBP12.21□□□□□ -0.45
PTCH1-204ENST00000375290 CPLX1O14810 134 aa12.21□□□□□ -0.46
PTCH1-204ENST00000375290 DIAPH1O60610 1272 aaKnown RBP12.21□□□□□ -0.46
PTCH1-204ENST00000375290 H0YHG0 523 aa12.21□□□□□ -0.46
PTCH1-204ENST00000375290 R3HCC1Q9Y3T6 440 aaKnown RBP12.2□□□□□ -0.46
PTCH1-204ENST00000375290 C11orf95C9JLR9 678 aaPredicted RBP12.2□□□□□ -0.46
PTCH1-204ENST00000375290 GAPVD1Q14C86 1478 aa12.2□□□□□ -0.46
PTCH1-204ENST00000375290 FANCD2Q9BXW9 1451 aa12.2□□□□□ -0.46
PTCH1-204ENST00000375290 COG3Q96JB2 828 aa12.2□□□□□ -0.46
PTCH1-204ENST00000375290 CFAP45Q9UL16 551 aa12.2□□□□□ -0.46
PTCH1-204ENST00000375290 APPP05067 770 aa12.19□□□□□ -0.46
PTCH1-204ENST00000375290 CNTROBQ8N137 903 aa12.19□□□□□ -0.46
PTCH1-204ENST00000375290 DEF6Q9H4E7 631 aa12.19□□□□□ -0.46
PTCH1-204ENST00000375290 BRMS1Q9HCU9 246 aa12.19□□□□□ -0.46
PTCH1-204ENST00000375290 ATAD2Q6PL18 1390 aa12.19□□□□□ -0.46
PTCH1-204ENST00000375290 NKTRP30414 1462 aaKnown RBP12.19□□□□□ -0.46
PTCH1-204ENST00000375290 ZRSR2Q15696 482 aaKnown RBP12.19□□□□□ -0.46
PTCH1-204ENST00000375290 AMOTL1Q8IY63 956 aa12.19□□□□□ -0.46
PTCH1-204ENST00000375290 ZNF592Q92610 1267 aa12.18□□□□□ -0.46
PTCH1-204ENST00000375290 INCENPQ9NQS7 918 aa12.18□□□□□ -0.46
PTCH1-204ENST00000375290 MCM4P33991 863 aa12.18□□□□□ -0.46
PTCH1-204ENST00000375290 PNISRQ8TF01 805 aaKnown RBP12.18□□□□□ -0.46
PTCH1-204ENST00000375290 ZSCAN31Q96LW9 406 aaPredicted RBP12.18□□□□□ -0.46
PTCH1-204ENST00000375290 PES1O00541 588 aaKnown RBP12.18□□□□□ -0.46
PTCH1-204ENST00000375290 IFIT2P09913 472 aaKnown RBP12.17□□□□□ -0.46
PTCH1-204ENST00000375290 RILPL2Q969X0 211 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 GOLGA6L9A6NEM1 432 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 DDX11Q96FC9 970 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 TRIM5Q9C035 493 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 CGNQ9P2M7 1197 aaKnown RBP12.17□□□□□ -0.46
PTCH1-204ENST00000375290 IGF1RP08069 1367 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 POTEB2H3BUK9 544 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 FILIP1LQ4L180 1135 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 NCAPD3P42695 1498 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 GOLGA6L10A6NI86 522 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 FOXD1Q16676 465 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 APAF1O14727 1248 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 ABCC11Q96J66 1382 aa12.17□□□□□ -0.46
PTCH1-204ENST00000375290 NPHP1O15259 732 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 ANO2Q9NQ90 1003 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 CCAR2Q8N163 923 aaKnown RBP12.16□□□□□ -0.46
PTCH1-204ENST00000375290 PRDM2Q13029 1718 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 APBB1O00213 710 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 KIAA0754O94854 1291 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 CC2D2AQ9P2K1 1620 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 CLCN1P35523 988 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 ARAP1Q96P48 1450 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 KRT85P78386 507 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 CCDC146Q8IYE0 955 aa12.16□□□□□ -0.46
PTCH1-204ENST00000375290 WDR97A6NE52 1622 aa12.15□□□□□ -0.46
PTCH1-204ENST00000375290 TAF7LQ5H9L4 462 aa12.15□□□□□ -0.46
PTCH1-204ENST00000375290 FRAT2O75474 233 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-204ENST00000375290 POLR3GO15318 223 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-204ENST00000375290 TMX4Q9H1E5 349 aaPredicted RBP12.15□□□□□ -0.46
PTCH1-204ENST00000375290 ERICH2A1L162 156 aa12.15□□□□□ -0.46
PTCH1-204ENST00000375290 ERLIN2O94905 339 aa12.15□□□□□ -0.46
PTCH1-204ENST00000375290 SLC4A10Q6U841 1118 aa12.15□□□□□ -0.46
PTCH1-204ENST00000375290 UVSSAQ2YD98 709 aa12.14□□□□□ -0.47
PTCH1-204ENST00000375290 MAP9Q49MG5 647 aa12.14□□□□□ -0.47
PTCH1-204ENST00000375290 KRT32Q14532 448 aa12.14□□□□□ -0.47
PTCH1-204ENST00000375290 INSRP06213 1382 aa12.14□□□□□ -0.47
PTCH1-204ENST00000375290 PAXBP1Q9Y5B6 917 aa12.14□□□□□ -0.47
PTCH1-204ENST00000375290 SMTNL1A8MU46 457 aa12.14□□□□□ -0.47
PTCH1-204ENST00000375290 CCT4P50991 539 aaKnown RBP12.14□□□□□ -0.47
PTCH1-204ENST00000375290 ZSCAN12O43309 604 aa12.14□□□□□ -0.47
PTCH1-204ENST00000375290 CREBRFQ8IUR6 639 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 ZMYM3Q14202 1370 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 GPRASP1Q5JY77 1395 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 UQCRHLA0A096LP55 91 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 UQCRHP07919 91 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 SDF4Q9BRK5 362 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 CTAGE5O15320 804 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 TERF1P54274 439 aa12.13□□□□□ -0.47
PTCH1-204ENST00000375290 ARID3AQ99856 593 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms