RNA–Protein interactions for RNA: ENST00000374945.1

LINC01993-201, Transcript of long intergenic non-protein coding RNA 1993, humanhuman

TSL 2 BASIC

Gene LINC01993, Length 2,934 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01993-201ENST00000374945 RRAGDQ9NQL2 400 aaPredicted RBP16.81■□□□□ 0.28
LINC01993-201ENST00000374945 STK26Q9P289 416 aa16.81■□□□□ 0.28
LINC01993-201ENST00000374945 GLI2P10070 1586 aa16.8■□□□□ 0.28
LINC01993-201ENST00000374945 KNSTRNQ9Y448 316 aa16.8■□□□□ 0.28
LINC01993-201ENST00000374945 MYOM2P54296 1465 aa16.8■□□□□ 0.28
LINC01993-201ENST00000374945 EIF3AQ14152 1382 aaKnown RBP16.79■□□□□ 0.28
LINC01993-201ENST00000374945 NLRP1Q9C000 1473 aa16.79■□□□□ 0.28
LINC01993-201ENST00000374945 IFT172Q9UG01 1749 aa16.79■□□□□ 0.28
LINC01993-201ENST00000374945 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
LINC01993-201ENST00000374945 PIK3C2GO75747 1445 aa16.77■□□□□ 0.27
LINC01993-201ENST00000374945 C14orf93Q9H972 538 aaKnown RBP16.76■□□□□ 0.27
LINC01993-201ENST00000374945 PLPPR3Q6T4P5 718 aa16.76■□□□□ 0.27
LINC01993-201ENST00000374945 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.76■□□□□ 0.27
LINC01993-201ENST00000374945 CENPJQ9HC77 1338 aaPredicted RBP16.76■□□□□ 0.27
LINC01993-201ENST00000374945 ERVK-7P63135 1459 aa16.76■□□□□ 0.27
LINC01993-201ENST00000374945 STAG3Q9UJ98 1225 aa16.76■□□□□ 0.27
LINC01993-201ENST00000374945 PPLO60437 1756 aa16.75■□□□□ 0.27
LINC01993-201ENST00000374945 AMER1Q5JTC6 1135 aaPredicted RBP16.75■□□□□ 0.27
LINC01993-201ENST00000374945 MYO5BQ9ULV0 1848 aa16.75■□□□□ 0.27
LINC01993-201ENST00000374945 GOLGA2Q08379 1002 aa16.75■□□□□ 0.27
LINC01993-201ENST00000374945 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
LINC01993-201ENST00000374945 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
LINC01993-201ENST00000374945 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
LINC01993-201ENST00000374945 CARD14Q9BXL6 1004 aa16.74■□□□□ 0.27
LINC01993-201ENST00000374945 SLC12A5Q9H2X9 1139 aa16.74■□□□□ 0.27
LINC01993-201ENST00000374945 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
LINC01993-201ENST00000374945 SEC24BO95487 1268 aa16.73■□□□□ 0.27
LINC01993-201ENST00000374945 IGHDP01880 384 aa16.73■□□□□ 0.27
LINC01993-201ENST00000374945 CDCA8Q53HL2 280 aa16.73■□□□□ 0.27
LINC01993-201ENST00000374945 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
LINC01993-201ENST00000374945 VGFO15240 615 aaPredicted RBP16.72■□□□□ 0.27
LINC01993-201ENST00000374945 PPP2R1AP30153 589 aa16.72■□□□□ 0.27
LINC01993-201ENST00000374945 KIF13AQ9H1H9 1805 aa16.72■□□□□ 0.27
LINC01993-201ENST00000374945 MYOM1P52179 1685 aa16.71■□□□□ 0.27
LINC01993-201ENST00000374945 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
LINC01993-201ENST00000374945 L1TD1Q5T7N2 865 aaKnown RBP16.71■□□□□ 0.27
LINC01993-201ENST00000374945 NEURL4Q96JN8 1562 aa16.7■□□□□ 0.26
LINC01993-201ENST00000374945 NKTRP30414 1462 aaKnown RBP16.7■□□□□ 0.26
LINC01993-201ENST00000374945 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
LINC01993-201ENST00000374945 ADGRB1O14514 1584 aa16.7■□□□□ 0.26
LINC01993-201ENST00000374945 PIK3C2BO00750 1634 aa16.7■□□□□ 0.26
LINC01993-201ENST00000374945 SPINK5Q9NQ38 1064 aaPredicted RBP16.69■□□□□ 0.26
LINC01993-201ENST00000374945 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
LINC01993-201ENST00000374945 PLEKHG5O94827 1062 aa16.69■□□□□ 0.26
LINC01993-201ENST00000374945 WDR43Q15061 677 aaKnown RBP eCLIP16.69■□□□□ 0.26
LINC01993-201ENST00000374945 CABP2Q9NPB3 220 aa16.69■□□□□ 0.26
LINC01993-201ENST00000374945 PREX1Q8TCU6 1659 aa16.69■□□□□ 0.26
LINC01993-201ENST00000374945 SLKQ9H2G2 1235 aaPredicted RBP16.69■□□□□ 0.26
LINC01993-201ENST00000374945 ARHGAP31Q2M1Z3 1444 aa16.68■□□□□ 0.26
LINC01993-201ENST00000374945 KDM5AP29375 1690 aaKnown RBP16.68■□□□□ 0.26
LINC01993-201ENST00000374945 BCAR3O75815 825 aa16.68■□□□□ 0.26
LINC01993-201ENST00000374945 RPGRIP1LQ68CZ1 1315 aa16.68■□□□□ 0.26
LINC01993-201ENST00000374945 BECN1Q14457 450 aa16.67■□□□□ 0.26
LINC01993-201ENST00000374945 CLTCQ00610 1675 aaKnown RBP16.67■□□□□ 0.26
LINC01993-201ENST00000374945 MINK1Q8N4C8 1332 aaPredicted RBP16.66■□□□□ 0.26
LINC01993-201ENST00000374945 MAPK8IP3Q9UPT6 1336 aa16.65■□□□□ 0.26
LINC01993-201ENST00000374945 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
LINC01993-201ENST00000374945 CCDC146Q8IYE0 955 aa16.65■□□□□ 0.26
LINC01993-201ENST00000374945 ZC3H13Q5T200 1668 aaKnown RBP16.65■□□□□ 0.26
LINC01993-201ENST00000374945 XRCC6P12956 609 aaKnown RBP eCLIP16.64■□□□□ 0.25
LINC01993-201ENST00000374945 ESF1Q9H501 851 aaKnown RBP16.64■□□□□ 0.25
LINC01993-201ENST00000374945 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
LINC01993-201ENST00000374945 QRICH2Q9H0J4 1663 aa16.64■□□□□ 0.25
LINC01993-201ENST00000374945 TMEM131LA2VDJ0 1609 aa16.63■□□□□ 0.25
LINC01993-201ENST00000374945 PRAM1Q96QH2 718 aa16.63■□□□□ 0.25
LINC01993-201ENST00000374945 CGNL1Q0VF96 1302 aa16.62■□□□□ 0.25
LINC01993-201ENST00000374945 SETBP1Q9Y6X0 1596 aa16.62■□□□□ 0.25
LINC01993-201ENST00000374945 CEBPAP49715 358 aaPredicted RBP16.62■□□□□ 0.25
LINC01993-201ENST00000374945 SRPK2P78362 688 aaKnown RBP16.62■□□□□ 0.25
LINC01993-201ENST00000374945 NSD3Q9BZ95 1437 aa16.61■□□□□ 0.25
LINC01993-201ENST00000374945 PKNOX2Q96KN3 472 aa16.61■□□□□ 0.25
LINC01993-201ENST00000374945 CLCN1P35523 988 aa16.61■□□□□ 0.25
LINC01993-201ENST00000374945 CLUAP1Q96AJ1 413 aa16.61■□□□□ 0.25
LINC01993-201ENST00000374945 TBC1D32Q96NH3 1257 aa16.61■□□□□ 0.25
LINC01993-201ENST00000374945 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
LINC01993-201ENST00000374945 DMRT2Q9Y5R5 561 aa16.61■□□□□ 0.25
LINC01993-201ENST00000374945 TRHP20396 242 aaPredicted RBP16.6■□□□□ 0.25
LINC01993-201ENST00000374945 PDE3AQ14432 1141 aa16.6■□□□□ 0.25
LINC01993-201ENST00000374945 WAPLQ7Z5K2 1190 aa16.6■□□□□ 0.25
LINC01993-201ENST00000374945 NINLQ9Y2I6 1382 aa16.6■□□□□ 0.25
LINC01993-201ENST00000374945 PANK2Q9BZ23 570 aa16.59■□□□□ 0.25
LINC01993-201ENST00000374945 GOLGA6L3A6NEY3 463 aa16.59■□□□□ 0.25
LINC01993-201ENST00000374945 E9PSI1 815 aa16.59■□□□□ 0.25
LINC01993-201ENST00000374945 APAF1O14727 1248 aa16.59■□□□□ 0.25
LINC01993-201ENST00000374945 ZMYM3Q14202 1370 aa16.58■□□□□ 0.25
LINC01993-201ENST00000374945 MYO3AQ8NEV4 1616 aa16.58■□□□□ 0.24
LINC01993-201ENST00000374945 SBNO2Q9Y2G9 1366 aa16.58■□□□□ 0.24
LINC01993-201ENST00000374945 ARHGEF28Q8N1W1 1705 aaKnown RBP16.58■□□□□ 0.24
LINC01993-201ENST00000374945 TULP4Q9NRJ4 1543 aa16.57■□□□□ 0.24
LINC01993-201ENST00000374945 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
LINC01993-201ENST00000374945 EVC2Q86UK5 1308 aa16.57■□□□□ 0.24
LINC01993-201ENST00000374945 NPC1L1Q9UHC9 1359 aa16.57■□□□□ 0.24
LINC01993-201ENST00000374945 PNNQ9H307 717 aaKnown RBP16.56■□□□□ 0.24
LINC01993-201ENST00000374945 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
LINC01993-201ENST00000374945 ARHGEF40Q8TER5 1519 aa16.56■□□□□ 0.24
LINC01993-201ENST00000374945 MCM4P33991 863 aa16.56■□□□□ 0.24
LINC01993-201ENST00000374945 MORC1Q86VD1 984 aa16.56■□□□□ 0.24
LINC01993-201ENST00000374945 NAP1L5Q96NT1 182 aaPredicted RBP16.56■□□□□ 0.24
LINC01993-201ENST00000374945 ARXQ96QS3 562 aa16.56■□□□□ 0.24
LINC01993-201ENST00000374945 AGLP35573 1532 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms