RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 ADGRB2O60241 1585 aa21.34■■□□□ 1.01
HSPG2-201ENST00000374673 CDC42BPGQ6DT37 1551 aa21.34■■□□□ 1.01
HSPG2-201ENST00000374673 POGKQ9P215 609 aa21.33■■□□□ 1.01
HSPG2-201ENST00000374673 QRICH2Q9H0J4 1663 aa21.33■■□□□ 1
HSPG2-201ENST00000374673 EIF3AQ14152 1382 aaKnown RBP21.33■■□□□ 1
HSPG2-201ENST00000374673 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
HSPG2-201ENST00000374673 SAFB2Q14151 953 aaKnown RBP eCLIP21.28■■□□□ 1
HSPG2-201ENST00000374673 CADPS2Q86UW7 1296 aa21.28■■□□□ 1
HSPG2-201ENST00000374673 FMN2Q9NZ56 1722 aa21.28■■□□□ 1
HSPG2-201ENST00000374673 TOM1O60784 492 aa21.27■■□□□ 1
HSPG2-201ENST00000374673 ATF3P18847 181 aa21.26■□□□□ 0.99
HSPG2-201ENST00000374673 UBAP1LF5GYI3 381 aa21.25■□□□□ 0.99
HSPG2-201ENST00000374673 MINK1Q8N4C8 1332 aaPredicted RBP21.25■□□□□ 0.99
HSPG2-201ENST00000374673 USP47Q96K76 1375 aa21.24■□□□□ 0.99
HSPG2-201ENST00000374673 MST1RQ04912 1400 aa21.24■□□□□ 0.99
HSPG2-201ENST00000374673 SBNO2Q9Y2G9 1366 aa21.23■□□□□ 0.99
HSPG2-201ENST00000374673 HIRIP3Q9BW71 556 aaPredicted RBP21.21■□□□□ 0.99
HSPG2-201ENST00000374673 SLAIN2Q9P270 581 aa21.2■□□□□ 0.98
HSPG2-201ENST00000374673 C1orf167Q5SNV9 1468 aa21.2■□□□□ 0.98
HSPG2-201ENST00000374673 TULP4Q9NRJ4 1543 aa21.19■□□□□ 0.98
HSPG2-201ENST00000374673 USP32Q8NFA0 1604 aa21.19■□□□□ 0.98
HSPG2-201ENST00000374673 ROBO1Q9Y6N7 1651 aa21.19■□□□□ 0.98
HSPG2-201ENST00000374673 RGPD8O14715 1765 aaPredicted RBP21.19■□□□□ 0.98
HSPG2-201ENST00000374673 WASLO00401 505 aaPredicted RBP21.19■□□□□ 0.98
HSPG2-201ENST00000374673 FBXO41Q8TF61 875 aa21.19■□□□□ 0.98
HSPG2-201ENST00000374673 ST20-MTHFSA0A0A6YYL1 179 aa21.18■□□□□ 0.98
HSPG2-201ENST00000374673 ZEB1P37275 1124 aaPredicted RBP21.18■□□□□ 0.98
HSPG2-201ENST00000374673 ANKARQ7Z5J8 1434 aa21.18■□□□□ 0.98
HSPG2-201ENST00000374673 ITSN1Q15811 1721 aa21.16■□□□□ 0.98
HSPG2-201ENST00000374673 TESK2Q96S53 571 aa21.15■□□□□ 0.98
HSPG2-201ENST00000374673 EVC2Q86UK5 1308 aa21.14■□□□□ 0.97
HSPG2-201ENST00000374673 EIF4G2P78344 907 aaKnown RBP eCLIP21.14■□□□□ 0.97
HSPG2-201ENST00000374673 PIP4K2BP78356 416 aa21.14■□□□□ 0.97
HSPG2-201ENST00000374673 CDK19Q9BWU1 502 aa21.14■□□□□ 0.97
HSPG2-201ENST00000374673 TOPAZ1Q8N9V7 1692 aa21.14■□□□□ 0.97
HSPG2-201ENST00000374673 ATP7BP35670 1465 aa21.13■□□□□ 0.97
HSPG2-201ENST00000374673 KIF1AQ12756 1690 aa21.13■□□□□ 0.97
HSPG2-201ENST00000374673 SLC24A1O60721 1099 aa21.13■□□□□ 0.97
HSPG2-201ENST00000374673 NHSL1Q5SYE7 1610 aa21.11■□□□□ 0.97
HSPG2-201ENST00000374673 PRR36Q9H6K5 1346 aa21.11■□□□□ 0.97
HSPG2-201ENST00000374673 SCAF1Q9H7N4 1312 aaKnown RBP21.11■□□□□ 0.97
HSPG2-201ENST00000374673 NUTM2FA1L443 756 aa21.11■□□□□ 0.97
HSPG2-201ENST00000374673 BRINP3Q76B58 766 aa21.11■□□□□ 0.97
HSPG2-201ENST00000374673 HSPA5P11021 654 aaKnown RBP21.1■□□□□ 0.97
HSPG2-201ENST00000374673 AHDC1Q5TGY3 1603 aaPredicted RBP21.09■□□□□ 0.97
HSPG2-201ENST00000374673 SRPK2P78362 688 aaKnown RBP21.09■□□□□ 0.97
HSPG2-201ENST00000374673 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
HSPG2-201ENST00000374673 NUDT16Q96DE0 195 aaKnown RBP21.08■□□□□ 0.97
HSPG2-201ENST00000374673 ESCO1Q5FWF5 840 aa21.07■□□□□ 0.96
HSPG2-201ENST00000374673 CABP2Q9NPB3 220 aa21.07■□□□□ 0.96
HSPG2-201ENST00000374673 PUS7Q96PZ0 661 aaKnown RBP21.06■□□□□ 0.96
HSPG2-201ENST00000374673 PHLPP1O60346 1717 aa21.06■□□□□ 0.96
HSPG2-201ENST00000374673 TMF1P82094 1093 aa21.05■□□□□ 0.96
HSPG2-201ENST00000374673 ATAD2Q6PL18 1390 aa21.05■□□□□ 0.96
HSPG2-201ENST00000374673 DISP3Q9P2K9 1392 aa21.05■□□□□ 0.96
HSPG2-201ENST00000374673 PHF8Q9UPP1 1060 aa21.04■□□□□ 0.96
HSPG2-201ENST00000374673 CCDC61Q9Y6R9 512 aa21.04■□□□□ 0.96
HSPG2-201ENST00000374673 COL16A1Q07092 1604 aaPredicted RBP21.02■□□□□ 0.96
HSPG2-201ENST00000374673 PPIP5K1Q6PFW1 1433 aa21.02■□□□□ 0.96
HSPG2-201ENST00000374673 PLEKHG3A1L390 1219 aa21■□□□□ 0.95
HSPG2-201ENST00000374673 CDCA8Q53HL2 280 aa21■□□□□ 0.95
HSPG2-201ENST00000374673 NPHP3Q7Z494 1330 aa21■□□□□ 0.95
HSPG2-201ENST00000374673 PMFBP1Q8TBY8 1022 aa20.99■□□□□ 0.95
HSPG2-201ENST00000374673 POLR3AO14802 1390 aaPredicted RBP20.98■□□□□ 0.95
HSPG2-201ENST00000374673 AKAP12Q02952 1782 aa20.98■□□□□ 0.95
HSPG2-201ENST00000374673 PXDNQ92626 1479 aa20.98■□□□□ 0.95
HSPG2-201ENST00000374673 FOXO3O43524 673 aa20.97■□□□□ 0.95
HSPG2-201ENST00000374673 HSPA1LP34931 641 aa20.97■□□□□ 0.95
HSPG2-201ENST00000374673 ILDR1Q86SU0 546 aaPredicted RBP20.97■□□□□ 0.95
HSPG2-201ENST00000374673 DDX17Q92841 729 aaKnown RBP20.97■□□□□ 0.95
HSPG2-201ENST00000374673 SOS2Q07890 1332 aaPredicted RBP20.97■□□□□ 0.95
HSPG2-201ENST00000374673 MYOM1P52179 1685 aa20.96■□□□□ 0.95
HSPG2-201ENST00000374673 TRPM3Q9HCF6 1732 aaPredicted RBP20.96■□□□□ 0.95
HSPG2-201ENST00000374673 CABP1Q9NZU7 370 aa20.96■□□□□ 0.95
HSPG2-201ENST00000374673 NINLQ9Y2I6 1382 aa20.96■□□□□ 0.95
HSPG2-201ENST00000374673 NGDNQ8NEJ9 315 aaKnown RBP20.94■□□□□ 0.94
HSPG2-201ENST00000374673 ACEP12821 1306 aa20.94■□□□□ 0.94
HSPG2-201ENST00000374673 MON2Q7Z3U7 1717 aa20.93■□□□□ 0.94
HSPG2-201ENST00000374673 KRT28Q7Z3Y7 464 aa20.92■□□□□ 0.94
HSPG2-201ENST00000374673 CPSF1Q10570 1443 aaKnown RBP20.92■□□□□ 0.94
HSPG2-201ENST00000374673 CD163L1Q9NR16 1453 aa20.92■□□□□ 0.94
HSPG2-201ENST00000374673 SHPRHQ149N8 1683 aa20.92■□□□□ 0.94
HSPG2-201ENST00000374673 PSME1Q06323 249 aa20.91■□□□□ 0.94
HSPG2-201ENST00000374673 NRKQ7Z2Y5 1582 aa20.9■□□□□ 0.94
HSPG2-201ENST00000374673 SBNO1A3KN83 1393 aa20.9■□□□□ 0.94
HSPG2-201ENST00000374673 C11orf95C9JLR9 678 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-201ENST00000374673 XPCQ01831 940 aaPredicted RBP20.9■□□□□ 0.94
HSPG2-201ENST00000374673 TMC1Q8TDI8 760 aa20.9■□□□□ 0.94
HSPG2-201ENST00000374673 LRRC59Q96AG4 307 aaKnown RBP20.9■□□□□ 0.94
HSPG2-201ENST00000374673 SLC12A5Q9H2X9 1139 aa20.9■□□□□ 0.94
HSPG2-201ENST00000374673 ALS2Q96Q42 1657 aa20.89■□□□□ 0.94
HSPG2-201ENST00000374673 USP6P35125 1406 aa20.89■□□□□ 0.94
HSPG2-201ENST00000374673 BRD4O60885 1362 aaPredicted RBP20.89■□□□□ 0.93
HSPG2-201ENST00000374673 ZNF692Q9BU19 519 aaPredicted RBP20.88■□□□□ 0.93
HSPG2-201ENST00000374673 TNS3Q68CZ2 1445 aa20.87■□□□□ 0.93
HSPG2-201ENST00000374673 JCADQ9P266 1359 aa20.87■□□□□ 0.93
HSPG2-201ENST00000374673 KIF7Q2M1P5 1343 aa20.87■□□□□ 0.93
HSPG2-201ENST00000374673 COL22A1Q8NFW1 1626 aaPredicted RBP20.87■□□□□ 0.93
HSPG2-201ENST00000374673 SSH2Q76I76 1423 aa20.87■□□□□ 0.93
HSPG2-201ENST00000374673 A0A1W2PP64 1363 aa20.86■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms