RNA–Protein interactions for RNA: ENST00000374512.7

PHF1-201, Transcript of PHD finger protein 1, humanhuman

TSL 1 (best) BASIC

Gene PHF1, Length 2,224 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-201ENST00000374512 RIMBP3CA6NJZ7 1639 aa23.31■■□□□ 1.32
PHF1-201ENST00000374512 RIMBP3BA6NNM3 1639 aa23.31■■□□□ 1.32
PHF1-201ENST00000374512 RIMBP3Q9UFD9 1639 aa23.31■■□□□ 1.32
PHF1-201ENST00000374512 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
PHF1-201ENST00000374512 ARHGAP31Q2M1Z3 1444 aa23.3■■□□□ 1.32
PHF1-201ENST00000374512 QRICH2Q9H0J4 1663 aa23.29■■□□□ 1.32
PHF1-201ENST00000374512 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
PHF1-201ENST00000374512 ADGRB1O14514 1584 aa23.29■■□□□ 1.32
PHF1-201ENST00000374512 PDE3AQ14432 1141 aa23.28■■□□□ 1.32
PHF1-201ENST00000374512 YEATS2Q9ULM3 1422 aa23.28■■□□□ 1.32
PHF1-201ENST00000374512 LAS1LQ9Y4W2 734 aaKnown RBP23.27■■□□□ 1.31
PHF1-201ENST00000374512 CGNL1Q0VF96 1302 aa23.26■■□□□ 1.31
PHF1-201ENST00000374512 C8orf34Q49A92 452 aa23.26■■□□□ 1.31
PHF1-201ENST00000374512 TRAK1Q9UPV9 953 aa23.26■■□□□ 1.31
PHF1-201ENST00000374512 SKAP1Q86WV1 359 aa23.25■■□□□ 1.31
PHF1-201ENST00000374512 SPINK5Q9NQ38 1064 aaPredicted RBP23.24■■□□□ 1.31
PHF1-201ENST00000374512 DIP2BQ9P265 1576 aa23.24■■□□□ 1.31
PHF1-201ENST00000374512 AAMPQ13685 434 aa23.24■■□□□ 1.31
PHF1-201ENST00000374512 DAXXQ9UER7 740 aaPredicted RBP23.24■■□□□ 1.31
PHF1-201ENST00000374512 USP32Q8NFA0 1604 aa23.22■■□□□ 1.31
PHF1-201ENST00000374512 NSD3Q9BZ95 1437 aa23.21■■□□□ 1.31
PHF1-201ENST00000374512 FAM69CQ0P6D2 419 aa23.21■■□□□ 1.31
PHF1-201ENST00000374512 BCAR3O75815 825 aa23.2■■□□□ 1.3
PHF1-201ENST00000374512 NCBP3Q53F19 620 aaKnown RBP23.2■■□□□ 1.3
PHF1-201ENST00000374512 WWC1Q8IX03 1113 aa23.2■■□□□ 1.3
PHF1-201ENST00000374512 NEXMIFQ5QGS0 1516 aa23.19■■□□□ 1.3
PHF1-201ENST00000374512 TMEM132EQ6IEE7 984 aa23.18■■□□□ 1.3
PHF1-201ENST00000374512 PUS7Q96PZ0 661 aaKnown RBP23.18■■□□□ 1.3
PHF1-201ENST00000374512 SHPRHQ149N8 1683 aa23.18■■□□□ 1.3
PHF1-201ENST00000374512 VIRMAQ69YN4 1812 aaKnown RBP23.18■■□□□ 1.3
PHF1-201ENST00000374512 VGFO15240 615 aaPredicted RBP23.17■■□□□ 1.3
PHF1-201ENST00000374512 SLC52A1Q9NWF4 448 aa23.17■■□□□ 1.3
PHF1-201ENST00000374512 MORC1Q86VD1 984 aa23.16■■□□□ 1.3
PHF1-201ENST00000374512 RUNDC1Q96C34 613 aa23.16■■□□□ 1.3
PHF1-201ENST00000374512 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
PHF1-201ENST00000374512 PREX1Q8TCU6 1659 aa23.16■■□□□ 1.3
PHF1-201ENST00000374512 MAPK8IP3Q9UPT6 1336 aa23.16■■□□□ 1.3
PHF1-201ENST00000374512 ARHGEF28Q8N1W1 1705 aaKnown RBP23.16■■□□□ 1.3
PHF1-201ENST00000374512 TSPOAP1O95153 1857 aa23.15■■□□□ 1.3
PHF1-201ENST00000374512 IDI1Q13907 227 aa23.14■■□□□ 1.3
PHF1-201ENST00000374512 WDR63Q8IWG1 891 aa23.14■■□□□ 1.29
PHF1-201ENST00000374512 CLUAP1Q96AJ1 413 aa23.14■■□□□ 1.29
PHF1-201ENST00000374512 PHF23Q9BUL5 403 aaPredicted RBP23.14■■□□□ 1.29
PHF1-201ENST00000374512 IQSEC2Q5JU85 1478 aa23.13■■□□□ 1.29
PHF1-201ENST00000374512 ZFYVE9O95405 1425 aa23.13■■□□□ 1.29
PHF1-201ENST00000374512 RGS3P49796 1198 aa23.13■■□□□ 1.29
PHF1-201ENST00000374512 CCDC27Q2M243 656 aa23.13■■□□□ 1.29
PHF1-201ENST00000374512 DMRT2Q9Y5R5 561 aa23.13■■□□□ 1.29
PHF1-201ENST00000374512 ZMYM3Q14202 1370 aa23.12■■□□□ 1.29
PHF1-201ENST00000374512 EVC2Q86UK5 1308 aa23.12■■□□□ 1.29
PHF1-201ENST00000374512 REREQ9P2R6 1566 aa23.12■■□□□ 1.29
PHF1-201ENST00000374512 NSD2O96028 1365 aa23.11■■□□□ 1.29
PHF1-201ENST00000374512 NFKBIBQ15653 356 aa23.1■■□□□ 1.29
PHF1-201ENST00000374512 MYO5BQ9ULV0 1848 aa23.1■■□□□ 1.29
PHF1-201ENST00000374512 CANXP27824 592 aaKnown RBP23.1■■□□□ 1.29
PHF1-201ENST00000374512 CFAP53Q96M91 514 aa23.09■■□□□ 1.29
PHF1-201ENST00000374512 TMEM131LA2VDJ0 1609 aa23.09■■□□□ 1.29
PHF1-201ENST00000374512 IGHDP01880 384 aa23.09■■□□□ 1.29
PHF1-201ENST00000374512 TULP4Q9NRJ4 1543 aa23.09■■□□□ 1.29
PHF1-201ENST00000374512 NUTM2DQ5VT03 806 aaPredicted RBP23.08■■□□□ 1.29
PHF1-201ENST00000374512 PMFBP1Q8TBY8 1022 aa23.08■■□□□ 1.29
PHF1-201ENST00000374512 AGLP35573 1532 aa23.08■■□□□ 1.28
PHF1-201ENST00000374512 ANKRD36BQ8N2N9 1353 aa23.07■■□□□ 1.28
PHF1-201ENST00000374512 RARSP54136 660 aaKnown RBP23.06■■□□□ 1.28
PHF1-201ENST00000374512 GSE1Q14687 1217 aa23.06■■□□□ 1.28
PHF1-201ENST00000374512 TCP11L2Q8N4U5 519 aa23.06■■□□□ 1.28
PHF1-201ENST00000374512 TNNT2P45379 298 aaPredicted RBP23.05■■□□□ 1.28
PHF1-201ENST00000374512 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
PHF1-201ENST00000374512 COG6Q9Y2V7 657 aa23.04■■□□□ 1.28
PHF1-201ENST00000374512 SLC4A3P48751 1232 aa23.02■■□□□ 1.28
PHF1-201ENST00000374512 PANK1Q8TE04 598 aa23.02■■□□□ 1.28
PHF1-201ENST00000374512 MYH16Q9H6N6 1097 aa23.02■■□□□ 1.28
PHF1-201ENST00000374512 MTHFSP49914 203 aa23.01■■□□□ 1.27
PHF1-201ENST00000374512 CT47B1P0C2W7 299 aaPredicted RBP23.01■■□□□ 1.27
PHF1-201ENST00000374512 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
PHF1-201ENST00000374512 FRAT1Q92837 279 aaPredicted RBP22.98■■□□□ 1.27
PHF1-201ENST00000374512 CABP2Q9NPB3 220 aa22.98■■□□□ 1.27
PHF1-201ENST00000374512 USP19O94966 1318 aa22.98■■□□□ 1.27
PHF1-201ENST00000374512 ADGRB2O60241 1585 aa22.98■■□□□ 1.27
PHF1-201ENST00000374512 CLTCQ00610 1675 aaKnown RBP22.97■■□□□ 1.27
PHF1-201ENST00000374512 BECN1Q14457 450 aa22.97■■□□□ 1.27
PHF1-201ENST00000374512 NEUROD2Q15784 382 aa22.96■■□□□ 1.27
PHF1-201ENST00000374512 RWDD1Q9H446 243 aaPredicted RBP22.96■■□□□ 1.27
PHF1-201ENST00000374512 KIF13AQ9H1H9 1805 aa22.95■■□□□ 1.26
PHF1-201ENST00000374512 RRP7AQ9Y3A4 280 aaKnown RBP22.95■■□□□ 1.26
PHF1-201ENST00000374512 SAFB2Q14151 953 aaKnown RBP eCLIP22.94■■□□□ 1.26
PHF1-201ENST00000374512 PTPRMP28827 1452 aa22.94■■□□□ 1.26
PHF1-201ENST00000374512 ABCC11Q96J66 1382 aa22.94■■□□□ 1.26
PHF1-201ENST00000374512 STK26Q9P289 416 aa22.94■■□□□ 1.26
PHF1-201ENST00000374512 SRPK2P78362 688 aaKnown RBP22.93■■□□□ 1.26
PHF1-201ENST00000374512 A0A1W2PP64 1363 aa22.93■■□□□ 1.26
PHF1-201ENST00000374512 SPATA31D1Q6ZQQ2 1576 aa22.93■■□□□ 1.26
PHF1-201ENST00000374512 ATAD2Q6PL18 1390 aa22.92■■□□□ 1.26
PHF1-201ENST00000374512 UPF2Q9HAU5 1272 aaKnown RBP22.92■■□□□ 1.26
PHF1-201ENST00000374512 ARHGEF40Q8TER5 1519 aa22.92■■□□□ 1.26
PHF1-201ENST00000374512 STAG3Q9UJ98 1225 aa22.91■■□□□ 1.26
PHF1-201ENST00000374512 PCDHB15Q9Y5E8 787 aa22.91■■□□□ 1.26
PHF1-201ENST00000374512 NLRP1Q9C000 1473 aa22.91■■□□□ 1.26
PHF1-201ENST00000374512 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
PHF1-201ENST00000374512 ALKQ9UM73 1620 aa22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms