RNA–Protein interactions for RNA: ENST00000374342.6

PTPN20-203, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 1,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-203ENST00000374342 CABP2Q9NPB3 220 aa22.8■■□□□ 1.24
PTPN20-203ENST00000374342 SLIT1O75093 1534 aa22.79■■□□□ 1.24
PTPN20-203ENST00000374342 BCANQ96GW7 911 aa22.79■■□□□ 1.24
PTPN20-203ENST00000374342 PUS7Q96PZ0 661 aaKnown RBP22.79■■□□□ 1.24
PTPN20-203ENST00000374342 ADAMTSL3P82987 1691 aa22.79■■□□□ 1.24
PTPN20-203ENST00000374342 CPS1P31327 1500 aa22.79■■□□□ 1.24
PTPN20-203ENST00000374342 SRPK2P78362 688 aaKnown RBP22.77■■□□□ 1.24
PTPN20-203ENST00000374342 ABCC11Q96J66 1382 aa22.77■■□□□ 1.24
PTPN20-203ENST00000374342 PPP2R1AP30153 589 aa22.76■■□□□ 1.23
PTPN20-203ENST00000374342 ARHGAP23Q9P227 1491 aa22.76■■□□□ 1.23
PTPN20-203ENST00000374342 PLEKHG1Q9ULL1 1385 aa22.76■■□□□ 1.23
PTPN20-203ENST00000374342 PLEKHH1Q9ULM0 1364 aa22.76■■□□□ 1.23
PTPN20-203ENST00000374342 CEP170BQ9Y4F5 1589 aaPredicted RBP22.76■■□□□ 1.23
PTPN20-203ENST00000374342 ADAMTS13Q76LX8 1427 aa22.75■■□□□ 1.23
PTPN20-203ENST00000374342 ANKRD36BQ8N2N9 1353 aa22.75■■□□□ 1.23
PTPN20-203ENST00000374342 ATAD2Q6PL18 1390 aa22.74■■□□□ 1.23
PTPN20-203ENST00000374342 NINLQ9Y2I6 1382 aa22.74■■□□□ 1.23
PTPN20-203ENST00000374342 TECPR2O15040 1411 aa22.73■■□□□ 1.23
PTPN20-203ENST00000374342 LTKP29376 864 aa22.72■■□□□ 1.23
PTPN20-203ENST00000374342 WAPLQ7Z5K2 1190 aa22.72■■□□□ 1.23
PTPN20-203ENST00000374342 ZNF142P52746 1687 aaPredicted RBP22.72■■□□□ 1.23
PTPN20-203ENST00000374342 TXNDC2Q86VQ3 553 aa22.7■■□□□ 1.23
PTPN20-203ENST00000374342 EID1Q9Y6B2 187 aa22.7■■□□□ 1.23
PTPN20-203ENST00000374342 A0A1W2PP64 1363 aa22.69■■□□□ 1.22
PTPN20-203ENST00000374342 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
PTPN20-203ENST00000374342 FAM135BQ49AJ0 1406 aa22.69■■□□□ 1.22
PTPN20-203ENST00000374342 ANKRD26Q9UPS8 1709 aa22.69■■□□□ 1.22
PTPN20-203ENST00000374342 BLMP54132 1417 aaPredicted RBP22.69■■□□□ 1.22
PTPN20-203ENST00000374342 CDK19Q9BWU1 502 aa22.69■■□□□ 1.22
PTPN20-203ENST00000374342 DIP2AQ14689 1571 aa22.68■■□□□ 1.22
PTPN20-203ENST00000374342 KIF20BQ96Q89 1820 aa22.67■■□□□ 1.22
PTPN20-203ENST00000374342 MED14O60244 1454 aa22.67■■□□□ 1.22
PTPN20-203ENST00000374342 CGNL1Q0VF96 1302 aa22.67■■□□□ 1.22
PTPN20-203ENST00000374342 CD163L1Q9NR16 1453 aa22.66■■□□□ 1.22
PTPN20-203ENST00000374342 THEMISQ8N1K5 641 aaPredicted RBP22.66■■□□□ 1.22
PTPN20-203ENST00000374342 SUPT16HQ9Y5B9 1047 aaKnown RBP22.65■■□□□ 1.22
PTPN20-203ENST00000374342 INSRP06213 1382 aa22.64■■□□□ 1.22
PTPN20-203ENST00000374342 ADGRB2O60241 1585 aa22.63■■□□□ 1.21
PTPN20-203ENST00000374342 NSD2O96028 1365 aa22.63■■□□□ 1.21
PTPN20-203ENST00000374342 NEFLP07196 543 aa22.63■■□□□ 1.21
PTPN20-203ENST00000374342 ROBO2Q9HCK4 1378 aa22.63■■□□□ 1.21
PTPN20-203ENST00000374342 MORC1Q86VD1 984 aa22.63■■□□□ 1.21
PTPN20-203ENST00000374342 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.62■■□□□ 1.21
PTPN20-203ENST00000374342 SLC26A8Q96RN1 970 aa22.62■■□□□ 1.21
PTPN20-203ENST00000374342 TERF2IPQ9NYB0 399 aa22.62■■□□□ 1.21
PTPN20-203ENST00000374342 WDR43Q15061 677 aaKnown RBP eCLIP22.61■■□□□ 1.21
PTPN20-203ENST00000374342 ATP7BP35670 1465 aa22.61■■□□□ 1.21
PTPN20-203ENST00000374342 PTPRUQ92729 1446 aa22.61■■□□□ 1.21
PTPN20-203ENST00000374342 ITSN1Q15811 1721 aa22.61■■□□□ 1.21
PTPN20-203ENST00000374342 SIRT1Q96EB6 747 aa22.61■■□□□ 1.21
PTPN20-203ENST00000374342 SHPRHQ149N8 1683 aa22.6■■□□□ 1.21
PTPN20-203ENST00000374342 SMG6Q86US8 1419 aaKnown RBP22.6■■□□□ 1.21
PTPN20-203ENST00000374342 XRN1Q8IZH2 1706 aaKnown RBP22.59■■□□□ 1.21
PTPN20-203ENST00000374342 FKBP8Q14318 412 aa22.59■■□□□ 1.21
PTPN20-203ENST00000374342 WASLO00401 505 aaPredicted RBP22.58■■□□□ 1.21
PTPN20-203ENST00000374342 TNNT2P45379 298 aaPredicted RBP22.58■■□□□ 1.21
PTPN20-203ENST00000374342 HDGFL2Q7Z4V5 671 aaPredicted RBP22.58■■□□□ 1.21
PTPN20-203ENST00000374342 CABP1Q9NZU7 370 aa22.57■■□□□ 1.2
PTPN20-203ENST00000374342 ADAMTS8Q9UP79 889 aa22.57■■□□□ 1.2
PTPN20-203ENST00000374342 AKAP12Q02952 1782 aa22.57■■□□□ 1.2
PTPN20-203ENST00000374342 CDC42BPGQ6DT37 1551 aa22.56■■□□□ 1.2
PTPN20-203ENST00000374342 PPIP5K1Q6PFW1 1433 aa22.56■■□□□ 1.2
PTPN20-203ENST00000374342 SETD1BQ9UPS6 1966 aaKnown RBP22.56■■□□□ 1.2
PTPN20-203ENST00000374342 MON2Q7Z3U7 1717 aa22.56■■□□□ 1.2
PTPN20-203ENST00000374342 TOPAZ1Q8N9V7 1692 aa22.56■■□□□ 1.2
PTPN20-203ENST00000374342 SALL2Q9Y467 1007 aaPredicted RBP22.55■■□□□ 1.2
PTPN20-203ENST00000374342 PTCH1Q13635 1447 aa22.54■■□□□ 1.2
PTPN20-203ENST00000374342 POLR3AO14802 1390 aaPredicted RBP22.54■■□□□ 1.2
PTPN20-203ENST00000374342 NUDCQ9Y266 331 aa22.54■■□□□ 1.2
PTPN20-203ENST00000374342 TBX22Q9Y458 520 aa22.54■■□□□ 1.2
PTPN20-203ENST00000374342 GGNBP2Q9H3C7 697 aa22.51■■□□□ 1.19
PTPN20-203ENST00000374342 AMOTL2Q9Y2J4 779 aa22.51■■□□□ 1.19
PTPN20-203ENST00000374342 NUDT16Q96DE0 195 aaKnown RBP22.49■■□□□ 1.19
PTPN20-203ENST00000374342 CPSF1Q10570 1443 aaKnown RBP22.48■■□□□ 1.19
PTPN20-203ENST00000374342 FYB1O15117 783 aa22.47■■□□□ 1.19
PTPN20-203ENST00000374342 PRR36Q9H6K5 1346 aa22.47■■□□□ 1.19
PTPN20-203ENST00000374342 EDC4Q6P2E9 1401 aaKnown RBP22.47■■□□□ 1.19
PTPN20-203ENST00000374342 CHD2O14647 1828 aaKnown RBP22.47■■□□□ 1.19
PTPN20-203ENST00000374342 MTHFSP49914 203 aa22.46■■□□□ 1.19
PTPN20-203ENST00000374342 NCKAP5LQ9HCH0 1330 aa22.45■■□□□ 1.19
PTPN20-203ENST00000374342 NRKQ7Z2Y5 1582 aa22.45■■□□□ 1.18
PTPN20-203ENST00000374342 ANKLE2Q86XL3 938 aa22.45■■□□□ 1.18
PTPN20-203ENST00000374342 CCDC146Q8IYE0 955 aa22.45■■□□□ 1.18
PTPN20-203ENST00000374342 CFAP53Q96M91 514 aa22.45■■□□□ 1.18
PTPN20-203ENST00000374342 IRX6P78412 446 aaPredicted RBP22.44■■□□□ 1.18
PTPN20-203ENST00000374342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.44■■□□□ 1.18
PTPN20-203ENST00000374342 CCDC61Q9Y6R9 512 aa22.44■■□□□ 1.18
PTPN20-203ENST00000374342 RGPD8O14715 1765 aaPredicted RBP22.44■■□□□ 1.18
PTPN20-203ENST00000374342 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
PTPN20-203ENST00000374342 PDE3BQ13370 1112 aa22.43■■□□□ 1.18
PTPN20-203ENST00000374342 NKTRP30414 1462 aaKnown RBP22.42■■□□□ 1.18
PTPN20-203ENST00000374342 NALCNQ8IZF0 1738 aa22.41■■□□□ 1.18
PTPN20-203ENST00000374342 COL3A1P02461 1466 aaPredicted RBP22.4■■□□□ 1.18
PTPN20-203ENST00000374342 FMN2Q9NZ56 1722 aa22.4■■□□□ 1.18
PTPN20-203ENST00000374342 NUTM2FA1L443 756 aa22.39■■□□□ 1.17
PTPN20-203ENST00000374342 KCNA6P17658 529 aa22.39■■□□□ 1.17
PTPN20-203ENST00000374342 MAP2P11137 1827 aaKnown RBP22.39■■□□□ 1.17
PTPN20-203ENST00000374342 CDCA7LQ96GN5 454 aa22.37■■□□□ 1.17
PTPN20-203ENST00000374342 NPHP4O75161 1426 aaPredicted RBP22.37■■□□□ 1.17
PTPN20-203ENST00000374342 NME9Q86XW9 330 aa22.35■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms