RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 DZIP1LQ8IYY4 767 aaKnown RBP17.56■□□□□ 0.4
SNX30-201ENST00000374232 RIC3Q7Z5B4 369 aa17.56■□□□□ 0.4
SNX30-201ENST00000374232 C22orf23Q9BZE7 217 aa17.56■□□□□ 0.4
SNX30-201ENST00000374232 E9PSI1 815 aa17.55■□□□□ 0.4
SNX30-201ENST00000374232 SPINK5Q9NQ38 1064 aaPredicted RBP17.55■□□□□ 0.4
SNX30-201ENST00000374232 HOOK1Q9UJC3 728 aaKnown RBP17.55■□□□□ 0.4
SNX30-201ENST00000374232 ANKRD30AQ9BXX3 1397 aa17.54■□□□□ 0.4
SNX30-201ENST00000374232 OFD1O75665 1012 aa17.54■□□□□ 0.4
SNX30-201ENST00000374232 LRRFIP1Q32MZ4 808 aaKnown RBP17.54■□□□□ 0.4
SNX30-201ENST00000374232 PIBF1Q8WXW3 757 aa17.54■□□□□ 0.4
SNX30-201ENST00000374232 FHOD3Q2V2M9 1422 aa17.54■□□□□ 0.4
SNX30-201ENST00000374232 RUFY2Q8WXA3 655 aa17.54■□□□□ 0.4
SNX30-201ENST00000374232 NASPP49321 788 aaPredicted RBP17.53■□□□□ 0.4
SNX30-201ENST00000374232 CCAR1Q8IX12 1150 aaKnown RBP17.53■□□□□ 0.4
SNX30-201ENST00000374232 PRPF40AO75400 957 aaKnown RBP17.53■□□□□ 0.4
SNX30-201ENST00000374232 ATP2B2Q01814 1243 aa17.53■□□□□ 0.4
SNX30-201ENST00000374232 CGNL1Q0VF96 1302 aa17.53■□□□□ 0.4
SNX30-201ENST00000374232 GGNBP2Q9H3C7 697 aa17.53■□□□□ 0.4
SNX30-201ENST00000374232 CDCA7LQ96GN5 454 aa17.52■□□□□ 0.4
SNX30-201ENST00000374232 CHMP5Q9NZZ3 219 aa17.52■□□□□ 0.4
SNX30-201ENST00000374232 AK7Q96M32 723 aa17.52■□□□□ 0.4
SNX30-201ENST00000374232 REC8O95072 547 aa17.52■□□□□ 0.4
SNX30-201ENST00000374232 PRKRIP1Q9H875 184 aaPredicted RBP17.51■□□□□ 0.39
SNX30-201ENST00000374232 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
SNX30-201ENST00000374232 HSP90AB3PQ58FF7 597 aa17.51■□□□□ 0.39
SNX30-201ENST00000374232 DIAPH1O60610 1272 aaKnown RBP17.51■□□□□ 0.39
SNX30-201ENST00000374232 FAM193AP78312 1265 aa17.51■□□□□ 0.39
SNX30-201ENST00000374232 EFCAB2Q5VUJ9 269 aa17.51■□□□□ 0.39
SNX30-201ENST00000374232 H0YHG0 523 aa17.51■□□□□ 0.39
SNX30-201ENST00000374232 TRIM5Q9C035 493 aa17.51■□□□□ 0.39
SNX30-201ENST00000374232 SDF4Q9BRK5 362 aa17.5■□□□□ 0.39
SNX30-201ENST00000374232 CCDC73Q6ZRK6 1079 aa17.5■□□□□ 0.39
SNX30-201ENST00000374232 SIL1Q9H173 461 aa17.5■□□□□ 0.39
SNX30-201ENST00000374232 FIBPO43427 364 aa17.49■□□□□ 0.39
SNX30-201ENST00000374232 ANKRD62A6NC57 917 aa17.49■□□□□ 0.39
SNX30-201ENST00000374232 INTS3Q68E01 1043 aaKnown RBP17.49■□□□□ 0.39
SNX30-201ENST00000374232 PDE3BQ13370 1112 aa17.49■□□□□ 0.39
SNX30-201ENST00000374232 ZHX3Q9H4I2 956 aa17.49■□□□□ 0.39
SNX30-201ENST00000374232 RB1CC1Q8TDY2 1594 aa17.48■□□□□ 0.39
SNX30-201ENST00000374232 CENPHQ9H3R5 247 aa17.48■□□□□ 0.39
SNX30-201ENST00000374232 DDX19BQ9UMR2 479 aa17.48■□□□□ 0.39
SNX30-201ENST00000374232 SAFBQ15424 915 aaKnown RBP eCLIP17.48■□□□□ 0.39
SNX30-201ENST00000374232 OLFM4Q6UX06 510 aa17.48■□□□□ 0.39
SNX30-201ENST00000374232 NEFHP12036 1026 aa17.48■□□□□ 0.39
SNX30-201ENST00000374232 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
SNX30-201ENST00000374232 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.48■□□□□ 0.39
SNX30-201ENST00000374232 RALYLQ86SE5 291 aaKnown RBP17.47■□□□□ 0.39
SNX30-201ENST00000374232 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
SNX30-201ENST00000374232 VPS8Q8N3P4 1428 aa17.46■□□□□ 0.39
SNX30-201ENST00000374232 FSD1Q9BTV5 496 aa17.46■□□□□ 0.39
SNX30-201ENST00000374232 AXDND1Q5T1B0 1012 aaPredicted RBP17.46■□□□□ 0.39
SNX30-201ENST00000374232 USP47Q96K76 1375 aa17.46■□□□□ 0.39
SNX30-201ENST00000374232 RNF20Q5VTR2 975 aa17.46■□□□□ 0.39
SNX30-201ENST00000374232 TRAK2O60296 914 aa17.46■□□□□ 0.38
SNX30-201ENST00000374232 FMN1Q68DA7 1419 aa17.45■□□□□ 0.38
SNX30-201ENST00000374232 ERICH4A6NGS2 130 aa17.45■□□□□ 0.38
SNX30-201ENST00000374232 CECR2Q9BXF3 1484 aa17.45■□□□□ 0.38
SNX30-201ENST00000374232 TSPYL1Q9H0U9 437 aa17.45■□□□□ 0.38
SNX30-201ENST00000374232 HSP90B2PQ58FF3 399 aa17.45■□□□□ 0.38
SNX30-201ENST00000374232 TMX1Q9H3N1 280 aa17.45■□□□□ 0.38
SNX30-201ENST00000374232 DDX58O95786 925 aaKnown RBP17.44■□□□□ 0.38
SNX30-201ENST00000374232 SKAP1Q86WV1 359 aa17.44■□□□□ 0.38
SNX30-201ENST00000374232 EVC2Q86UK5 1308 aa17.44■□□□□ 0.38
SNX30-201ENST00000374232 WWC2Q6AWC2 1192 aa17.43■□□□□ 0.38
SNX30-201ENST00000374232 NEK4P51957 841 aa17.43■□□□□ 0.38
SNX30-201ENST00000374232 PRDM10Q9NQV6 1147 aa17.43■□□□□ 0.38
SNX30-201ENST00000374232 RBM42Q9BTD8 480 aaKnown RBP17.43■□□□□ 0.38
SNX30-201ENST00000374232 NLRP2Q9NX02 1062 aa17.43■□□□□ 0.38
SNX30-201ENST00000374232 ZBTB9Q96C00 473 aa17.42■□□□□ 0.38
SNX30-201ENST00000374232 CCDC173Q0VFZ6 552 aa17.42■□□□□ 0.38
SNX30-201ENST00000374232 CCDC144AA2RUR9 1427 aa17.42■□□□□ 0.38
SNX30-201ENST00000374232 TSR2Q969E8 191 aaKnown RBP17.42■□□□□ 0.38
SNX30-201ENST00000374232 ZBED9Q6R2W3 1325 aa17.41■□□□□ 0.38
SNX30-201ENST00000374232 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
SNX30-201ENST00000374232 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
SNX30-201ENST00000374232 ARGLU1Q9NWB6 273 aaPredicted RBP17.41■□□□□ 0.38
SNX30-201ENST00000374232 DCAF8L1A6NGE4 600 aa17.41■□□□□ 0.38
SNX30-201ENST00000374232 SURF6O75683 361 aaKnown RBP17.4■□□□□ 0.38
SNX30-201ENST00000374232 CDR1P51861 262 aa17.4■□□□□ 0.38
SNX30-201ENST00000374232 STRN4Q9NRL3 753 aa17.4■□□□□ 0.38
SNX30-201ENST00000374232 BRMS1Q9HCU9 246 aa17.4■□□□□ 0.38
SNX30-201ENST00000374232 CCDC97Q96F63 343 aaPredicted RBP17.39■□□□□ 0.37
SNX30-201ENST00000374232 CDK5RAP3Q96JB5 506 aa17.39■□□□□ 0.37
SNX30-201ENST00000374232 BCAR3O75815 825 aa17.39■□□□□ 0.37
SNX30-201ENST00000374232 TAX1BP1Q86VP1 789 aa17.39■□□□□ 0.37
SNX30-201ENST00000374232 SEPT11Q9NVA2 429 aaKnown RBP17.39■□□□□ 0.37
SNX30-201ENST00000374232 MYL6BP14649 208 aa17.39■□□□□ 0.37
SNX30-201ENST00000374232 CCDC39Q9UFE4 941 aa17.39■□□□□ 0.37
SNX30-201ENST00000374232 TSPY26PQ9H489 355 aa17.39■□□□□ 0.37
SNX30-201ENST00000374232 ADAMTS8Q9UP79 889 aa17.39■□□□□ 0.37
SNX30-201ENST00000374232 KRT18P05783 430 aaKnown RBP17.38■□□□□ 0.37
SNX30-201ENST00000374232 TANGO6Q9C0B7 1094 aa17.38■□□□□ 0.37
SNX30-201ENST00000374232 SYCP1Q15431 976 aa17.37■□□□□ 0.37
SNX30-201ENST00000374232 CYB5RLQ6IPT4 315 aa17.37■□□□□ 0.37
SNX30-201ENST00000374232 RUNDC1Q96C34 613 aa17.37■□□□□ 0.37
SNX30-201ENST00000374232 NUCB2P80303 420 aa17.37■□□□□ 0.37
SNX30-201ENST00000374232 NOM1Q5C9Z4 860 aaKnown RBP17.37■□□□□ 0.37
SNX30-201ENST00000374232 CCDC191Q8NCU4 936 aa17.37■□□□□ 0.37
SNX30-201ENST00000374232 DDX54Q8TDD1 881 aaKnown RBP17.37■□□□□ 0.37
SNX30-201ENST00000374232 NUP133Q8WUM0 1156 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms