RNA–Protein interactions for RNA: ENST00000374218.6

PTPN20-201, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN20, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-201ENST00000374218 SRPK2P78362 688 aaKnown RBP12.68□□□□□ -0.38
PTPN20-201ENST00000374218 KNDC1Q76NI1 1749 aa12.68□□□□□ -0.38
PTPN20-201ENST00000374218 XRN1Q8IZH2 1706 aaKnown RBP12.68□□□□□ -0.38
PTPN20-201ENST00000374218 NCOA3Q9Y6Q9 1424 aa12.68□□□□□ -0.38
PTPN20-201ENST00000374218 NWD1Q149M9 1564 aa12.67□□□□□ -0.38
PTPN20-201ENST00000374218 WASLO00401 505 aaPredicted RBP12.67□□□□□ -0.38
PTPN20-201ENST00000374218 ARHGEF28Q8N1W1 1705 aaKnown RBP12.67□□□□□ -0.38
PTPN20-201ENST00000374218 CHD2O14647 1828 aaKnown RBP12.67□□□□□ -0.38
PTPN20-201ENST00000374218 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
PTPN20-201ENST00000374218 C19orf44Q9H6X5 657 aa12.66□□□□□ -0.38
PTPN20-201ENST00000374218 KIF7Q2M1P5 1343 aa12.66□□□□□ -0.38
PTPN20-201ENST00000374218 TMEM94Q12767 1356 aa12.65□□□□□ -0.38
PTPN20-201ENST00000374218 CCDC7Q96M83 1385 aa12.65□□□□□ -0.38
PTPN20-201ENST00000374218 DISP3Q9P2K9 1392 aa12.65□□□□□ -0.38
PTPN20-201ENST00000374218 WASHC2AQ641Q2 1341 aa12.64□□□□□ -0.39
PTPN20-201ENST00000374218 C11orf95C9JLR9 678 aaPredicted RBP12.64□□□□□ -0.39
PTPN20-201ENST00000374218 RBM33Q96EV2 1170 aaKnown RBP12.64□□□□□ -0.39
PTPN20-201ENST00000374218 ATAD2Q6PL18 1390 aa12.64□□□□□ -0.39
PTPN20-201ENST00000374218 ATF3P18847 181 aa12.64□□□□□ -0.39
PTPN20-201ENST00000374218 QRICH2Q9H0J4 1663 aa12.64□□□□□ -0.39
PTPN20-201ENST00000374218 CABP2Q9NPB3 220 aa12.63□□□□□ -0.39
PTPN20-201ENST00000374218 ADGRL3Q9HAR2 1447 aa12.63□□□□□ -0.39
PTPN20-201ENST00000374218 MSH6P52701 1360 aa12.63□□□□□ -0.39
PTPN20-201ENST00000374218 CADPS2Q86UW7 1296 aa12.63□□□□□ -0.39
PTPN20-201ENST00000374218 TMC1Q8TDI8 760 aa12.62□□□□□ -0.39
PTPN20-201ENST00000374218 CCDC61Q9Y6R9 512 aa12.62□□□□□ -0.39
PTPN20-201ENST00000374218 PELP1Q8IZL8 1130 aaKnown RBP12.61□□□□□ -0.39
PTPN20-201ENST00000374218 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
PTPN20-201ENST00000374218 NUDT16Q96DE0 195 aaKnown RBP12.61□□□□□ -0.39
PTPN20-201ENST00000374218 LRRC7Q96NW7 1537 aa12.6□□□□□ -0.39
PTPN20-201ENST00000374218 DDX10Q13206 875 aaKnown RBP12.6□□□□□ -0.39
PTPN20-201ENST00000374218 DCCP43146 1447 aa12.59□□□□□ -0.39
PTPN20-201ENST00000374218 ADGRB2O60241 1585 aa12.59□□□□□ -0.39
PTPN20-201ENST00000374218 TULP4Q9NRJ4 1543 aa12.59□□□□□ -0.39
PTPN20-201ENST00000374218 TERF2IPQ9NYB0 399 aa12.59□□□□□ -0.39
PTPN20-201ENST00000374218 ANKARQ7Z5J8 1434 aa12.58□□□□□ -0.4
PTPN20-201ENST00000374218 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
PTPN20-201ENST00000374218 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.58□□□□□ -0.4
PTPN20-201ENST00000374218 HDGFL2Q7Z4V5 671 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-201ENST00000374218 CDC42BPGQ6DT37 1551 aa12.57□□□□□ -0.4
PTPN20-201ENST00000374218 CABP1Q9NZU7 370 aa12.57□□□□□ -0.4
PTPN20-201ENST00000374218 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
PTPN20-201ENST00000374218 STRCP1A6NGW2 1772 aa12.55□□□□□ -0.4
PTPN20-201ENST00000374218 PLEKHG3A1L390 1219 aa12.55□□□□□ -0.4
PTPN20-201ENST00000374218 ESCO1Q5FWF5 840 aa12.55□□□□□ -0.4
PTPN20-201ENST00000374218 ZNF692Q9BU19 519 aaPredicted RBP12.55□□□□□ -0.4
PTPN20-201ENST00000374218 PANK3Q9H999 370 aa12.55□□□□□ -0.4
PTPN20-201ENST00000374218 PPIP5K1Q6PFW1 1433 aa12.55□□□□□ -0.4
PTPN20-201ENST00000374218 NGDNQ8NEJ9 315 aaKnown RBP12.55□□□□□ -0.4
PTPN20-201ENST00000374218 LTBP4Q8N2S1 1624 aa12.54□□□□□ -0.4
PTPN20-201ENST00000374218 PRR36Q9H6K5 1346 aa12.54□□□□□ -0.4
PTPN20-201ENST00000374218 SLAIN2Q9P270 581 aa12.54□□□□□ -0.4
PTPN20-201ENST00000374218 PHF8Q9UPP1 1060 aa12.54□□□□□ -0.4
PTPN20-201ENST00000374218 KNSTRNQ9Y448 316 aa12.54□□□□□ -0.4
PTPN20-201ENST00000374218 ATP7BP35670 1465 aa12.53□□□□□ -0.4
PTPN20-201ENST00000374218 ANKRD36BQ8N2N9 1353 aa12.53□□□□□ -0.4
PTPN20-201ENST00000374218 DIEXFQ68CQ4 756 aaKnown RBP12.53□□□□□ -0.4
PTPN20-201ENST00000374218 NALCNQ8IZF0 1738 aa12.53□□□□□ -0.4
PTPN20-201ENST00000374218 TOM1O60784 492 aa12.52□□□□□ -0.4
PTPN20-201ENST00000374218 PMFBP1Q8TBY8 1022 aa12.52□□□□□ -0.41
PTPN20-201ENST00000374218 C1orf167Q5SNV9 1468 aa12.51□□□□□ -0.41
PTPN20-201ENST00000374218 ACEP12821 1306 aa12.51□□□□□ -0.41
PTPN20-201ENST00000374218 MST1RQ04912 1400 aa12.5□□□□□ -0.41
PTPN20-201ENST00000374218 PSME1Q06323 249 aa12.5□□□□□ -0.41
PTPN20-201ENST00000374218 CERKQ8TCT0 537 aa12.5□□□□□ -0.41
PTPN20-201ENST00000374218 ORAI2Q96SN7 254 aa12.5□□□□□ -0.41
PTPN20-201ENST00000374218 KTN1Q86UP2 1357 aaKnown RBP12.5□□□□□ -0.41
PTPN20-201ENST00000374218 FMN2Q9NZ56 1722 aa12.5□□□□□ -0.41
PTPN20-201ENST00000374218 IQSEC2Q5JU85 1478 aa12.49□□□□□ -0.41
PTPN20-201ENST00000374218 A0A1W2PP64 1363 aa12.48□□□□□ -0.41
PTPN20-201ENST00000374218 CGNL1Q0VF96 1302 aa12.48□□□□□ -0.41
PTPN20-201ENST00000374218 POLR3AO14802 1390 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-201ENST00000374218 BRD4O60885 1362 aaPredicted RBP12.48□□□□□ -0.41
PTPN20-201ENST00000374218 ANP32CO43423 234 aa12.48□□□□□ -0.41
PTPN20-201ENST00000374218 FOXO3O43524 673 aa12.48□□□□□ -0.41
PTPN20-201ENST00000374218 NPHP3Q7Z494 1330 aa12.47□□□□□ -0.41
PTPN20-201ENST00000374218 CPSF1Q10570 1443 aaKnown RBP12.47□□□□□ -0.41
PTPN20-201ENST00000374218 PER1O15534 1290 aaPredicted RBP12.47□□□□□ -0.41
PTPN20-201ENST00000374218 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
PTPN20-201ENST00000374218 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
PTPN20-201ENST00000374218 NSD3Q9BZ95 1437 aa12.46□□□□□ -0.41
PTPN20-201ENST00000374218 BRINP3Q76B58 766 aa12.46□□□□□ -0.41
PTPN20-201ENST00000374218 ITSN1Q15811 1721 aa12.46□□□□□ -0.42
PTPN20-201ENST00000374218 EDC4Q6P2E9 1401 aaKnown RBP12.46□□□□□ -0.42
PTPN20-201ENST00000374218 TTC21AQ8NDW8 1320 aa12.45□□□□□ -0.42
PTPN20-201ENST00000374218 USP32Q8NFA0 1604 aa12.45□□□□□ -0.42
PTPN20-201ENST00000374218 XIRP1Q702N8 1843 aaKnown RBP12.45□□□□□ -0.42
PTPN20-201ENST00000374218 PAK3O75914 559 aaPredicted RBP12.44□□□□□ -0.42
PTPN20-201ENST00000374218 KRT28Q7Z3Y7 464 aa12.44□□□□□ -0.42
PTPN20-201ENST00000374218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.44□□□□□ -0.42
PTPN20-201ENST00000374218 USP6P35125 1406 aa12.44□□□□□ -0.42
PTPN20-201ENST00000374218 CD163L1Q9NR16 1453 aa12.44□□□□□ -0.42
PTPN20-201ENST00000374218 NPC1L1Q9UHC9 1359 aa12.44□□□□□ -0.42
PTPN20-201ENST00000374218 NSD2O96028 1365 aa12.44□□□□□ -0.42
PTPN20-201ENST00000374218 TTC21BQ7Z4L5 1316 aa12.44□□□□□ -0.42
PTPN20-201ENST00000374218 SCAF1Q9H7N4 1312 aaKnown RBP12.44□□□□□ -0.42
PTPN20-201ENST00000374218 MYOM1P52179 1685 aa12.43□□□□□ -0.42
PTPN20-201ENST00000374218 AMER1Q5JTC6 1135 aaPredicted RBP12.43□□□□□ -0.42
PTPN20-201ENST00000374218 TOPAZ1Q8N9V7 1692 aa12.43□□□□□ -0.42
PTPN20-201ENST00000374218 RALBP1Q15311 655 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms