RNA–Protein interactions for RNA: ENST00000373485.5

RBBP4-201, Transcript of RB binding protein 4, chromatin remodeling factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBBP4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBBP4-201ENST00000373485 SETD1AO15047 1707 aaKnown RBP13.22□□□□□ -0.29
RBBP4-201ENST00000373485 PTPRUQ92729 1446 aa13.22□□□□□ -0.29
RBBP4-201ENST00000373485 PRAG1Q86YV5 1406 aa13.21□□□□□ -0.29
RBBP4-201ENST00000373485 PIK3R4Q99570 1358 aa13.21□□□□□ -0.3
RBBP4-201ENST00000373485 CHD2O14647 1828 aaKnown RBP13.21□□□□□ -0.3
RBBP4-201ENST00000373485 RBM33Q96EV2 1170 aaKnown RBP13.21□□□□□ -0.3
RBBP4-201ENST00000373485 STK26Q9P289 416 aa13.21□□□□□ -0.3
RBBP4-201ENST00000373485 NBPF8Q3BBV2 869 aa13.2□□□□□ -0.3
RBBP4-201ENST00000373485 POTEHQ6S545 545 aa13.2□□□□□ -0.3
RBBP4-201ENST00000373485 PROSER2Q86WR7 435 aaPredicted RBP13.2□□□□□ -0.3
RBBP4-201ENST00000373485 CPS1P31327 1500 aa13.19□□□□□ -0.3
RBBP4-201ENST00000373485 ASXL1Q8IXJ9 1541 aa13.19□□□□□ -0.3
RBBP4-201ENST00000373485 NWD1Q149M9 1564 aa13.18□□□□□ -0.3
RBBP4-201ENST00000373485 NBPF1Q3BBV0 1214 aa13.18□□□□□ -0.3
RBBP4-201ENST00000373485 CERKQ8TCT0 537 aa13.18□□□□□ -0.3
RBBP4-201ENST00000373485 FBXO3Q9UK99 471 aa13.18□□□□□ -0.3
RBBP4-201ENST00000373485 LAMC1P11047 1609 aa13.18□□□□□ -0.3
RBBP4-201ENST00000373485 LRRC7Q96NW7 1537 aa13.17□□□□□ -0.3
RBBP4-201ENST00000373485 NKTRP30414 1462 aaKnown RBP13.16□□□□□ -0.3
RBBP4-201ENST00000373485 TIMELESSQ9UNS1 1208 aa13.16□□□□□ -0.3
RBBP4-201ENST00000373485 YTHDC2Q9H6S0 1430 aaKnown RBP13.16□□□□□ -0.3
RBBP4-201ENST00000373485 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
RBBP4-201ENST00000373485 LRPPRCP42704 1394 aaKnown RBP13.16□□□□□ -0.3
RBBP4-201ENST00000373485 TMEM94Q12767 1356 aa13.16□□□□□ -0.3
RBBP4-201ENST00000373485 TRAK1Q9UPV9 953 aa13.15□□□□□ -0.3
RBBP4-201ENST00000373485 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
RBBP4-201ENST00000373485 C14orf37Q86TY3 774 aa13.14□□□□□ -0.31
RBBP4-201ENST00000373485 ABCC11Q96J66 1382 aa13.14□□□□□ -0.31
RBBP4-201ENST00000373485 ROBO2Q9HCK4 1378 aa13.14□□□□□ -0.31
RBBP4-201ENST00000373485 WAPLQ7Z5K2 1190 aa13.13□□□□□ -0.31
RBBP4-201ENST00000373485 KIAA1210Q9ULL0 1709 aa13.13□□□□□ -0.31
RBBP4-201ENST00000373485 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
RBBP4-201ENST00000373485 PRKAR2AP13861 404 aaKnown RBP13.13□□□□□ -0.31
RBBP4-201ENST00000373485 ROCK2O75116 1388 aaKnown RBP13.13□□□□□ -0.31
RBBP4-201ENST00000373485 SAFB2Q14151 953 aaKnown RBP eCLIP13.12□□□□□ -0.31
RBBP4-201ENST00000373485 XIRP1Q702N8 1843 aaKnown RBP13.11□□□□□ -0.31
RBBP4-201ENST00000373485 PTCH1Q13635 1447 aa13.11□□□□□ -0.31
RBBP4-201ENST00000373485 PLEKHH1Q9ULM0 1364 aa13.11□□□□□ -0.31
RBBP4-201ENST00000373485 PRAM1Q96QH2 718 aa13.11□□□□□ -0.31
RBBP4-201ENST00000373485 POGKQ9P215 609 aa13.11□□□□□ -0.31
RBBP4-201ENST00000373485 TECPR2O15040 1411 aa13.11□□□□□ -0.31
RBBP4-201ENST00000373485 CARD11Q9BXL7 1154 aa13.1□□□□□ -0.31
RBBP4-201ENST00000373485 CREBZFQ9NS37 354 aa13.1□□□□□ -0.31
RBBP4-201ENST00000373485 KNDC1Q76NI1 1749 aa13.09□□□□□ -0.31
RBBP4-201ENST00000373485 RALGAPBQ86X10 1494 aa13.09□□□□□ -0.31
RBBP4-201ENST00000373485 MSH6P52701 1360 aa13.08□□□□□ -0.31
RBBP4-201ENST00000373485 UBAP1LF5GYI3 381 aa13.08□□□□□ -0.32
RBBP4-201ENST00000373485 SIRT1Q96EB6 747 aa13.08□□□□□ -0.32
RBBP4-201ENST00000373485 IQSEC2Q5JU85 1478 aa13.08□□□□□ -0.32
RBBP4-201ENST00000373485 DLC1Q96QB1 1528 aa13.08□□□□□ -0.32
RBBP4-201ENST00000373485 FAM135BQ49AJ0 1406 aa13.07□□□□□ -0.32
RBBP4-201ENST00000373485 NCOA3Q9Y6Q9 1424 aa13.07□□□□□ -0.32
RBBP4-201ENST00000373485 C19orf44Q9H6X5 657 aa13.07□□□□□ -0.32
RBBP4-201ENST00000373485 GPRASP1Q5JY77 1395 aa13.07□□□□□ -0.32
RBBP4-201ENST00000373485 ADGRL3Q9HAR2 1447 aa13.06□□□□□ -0.32
RBBP4-201ENST00000373485 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
RBBP4-201ENST00000373485 ARHGEF28Q8N1W1 1705 aaKnown RBP13.05□□□□□ -0.32
RBBP4-201ENST00000373485 TOM1O60784 492 aa13.05□□□□□ -0.32
RBBP4-201ENST00000373485 ATF3P18847 181 aa13.05□□□□□ -0.32
RBBP4-201ENST00000373485 HIRIP3Q9BW71 556 aaPredicted RBP13.05□□□□□ -0.32
RBBP4-201ENST00000373485 MINK1Q8N4C8 1332 aaPredicted RBP13.05□□□□□ -0.32
RBBP4-201ENST00000373485 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.05□□□□□ -0.32
RBBP4-201ENST00000373485 PIP4K2BP78356 416 aa13.05□□□□□ -0.32
RBBP4-201ENST00000373485 CHADLQ6NUI6 762 aa13.05□□□□□ -0.32
RBBP4-201ENST00000373485 CENPJQ9HC77 1338 aaPredicted RBP13.04□□□□□ -0.32
RBBP4-201ENST00000373485 CADPS2Q86UW7 1296 aa13.03□□□□□ -0.32
RBBP4-201ENST00000373485 NUTM2FA1L443 756 aa13.02□□□□□ -0.33
RBBP4-201ENST00000373485 SLAIN2Q9P270 581 aa13.02□□□□□ -0.33
RBBP4-201ENST00000373485 EIF3AQ14152 1382 aaKnown RBP13.02□□□□□ -0.33
RBBP4-201ENST00000373485 DCCP43146 1447 aa13□□□□□ -0.33
RBBP4-201ENST00000373485 FBXO41Q8TF61 875 aa13□□□□□ -0.33
RBBP4-201ENST00000373485 USP47Q96K76 1375 aa12.99□□□□□ -0.33
RBBP4-201ENST00000373485 ST20-MTHFSA0A0A6YYL1 179 aa12.99□□□□□ -0.33
RBBP4-201ENST00000373485 FARP1Q9Y4F1 1045 aaPredicted RBP12.99□□□□□ -0.33
RBBP4-201ENST00000373485 QRICH2Q9H0J4 1663 aa12.99□□□□□ -0.33
RBBP4-201ENST00000373485 MST1RQ04912 1400 aa12.99□□□□□ -0.33
RBBP4-201ENST00000373485 WASLO00401 505 aaPredicted RBP12.98□□□□□ -0.33
RBBP4-201ENST00000373485 MNX1P50219 401 aaPredicted RBP12.98□□□□□ -0.33
RBBP4-201ENST00000373485 CDC42BPGQ6DT37 1551 aa12.98□□□□□ -0.33
RBBP4-201ENST00000373485 VASPP50552 380 aaPredicted RBP12.97□□□□□ -0.33
RBBP4-201ENST00000373485 MIER1Q8N108 512 aa12.97□□□□□ -0.33
RBBP4-201ENST00000373485 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
RBBP4-201ENST00000373485 ADGRB2O60241 1585 aa12.97□□□□□ -0.33
RBBP4-201ENST00000373485 PLEKHG5O94827 1062 aa12.96□□□□□ -0.33
RBBP4-201ENST00000373485 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.33
RBBP4-201ENST00000373485 SRPK2P78362 688 aaKnown RBP12.96□□□□□ -0.34
RBBP4-201ENST00000373485 ESCO1Q5FWF5 840 aa12.96□□□□□ -0.34
RBBP4-201ENST00000373485 ORAI2Q96SN7 254 aa12.96□□□□□ -0.34
RBBP4-201ENST00000373485 CABP2Q9NPB3 220 aa12.96□□□□□ -0.34
RBBP4-201ENST00000373485 FMN2Q9NZ56 1722 aa12.96□□□□□ -0.34
RBBP4-201ENST00000373485 EIF4G2P78344 907 aaKnown RBP eCLIP12.95□□□□□ -0.34
RBBP4-201ENST00000373485 BRINP3Q76B58 766 aa12.95□□□□□ -0.34
RBBP4-201ENST00000373485 EVC2Q86UK5 1308 aa12.94□□□□□ -0.34
RBBP4-201ENST00000373485 ROBO1Q9Y6N7 1651 aa12.94□□□□□ -0.34
RBBP4-201ENST00000373485 HSPA5P11021 654 aaKnown RBP12.94□□□□□ -0.34
RBBP4-201ENST00000373485 ILDR1Q86SU0 546 aaPredicted RBP12.94□□□□□ -0.34
RBBP4-201ENST00000373485 PLCD3Q8N3E9 789 aa12.94□□□□□ -0.34
RBBP4-201ENST00000373485 PRR36Q9H6K5 1346 aa12.93□□□□□ -0.34
RBBP4-201ENST00000373485 NUDT16Q96DE0 195 aaKnown RBP12.93□□□□□ -0.34
RBBP4-201ENST00000373485 TESK2Q96S53 571 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms