RNA–Protein interactions for RNA: ENST00000373298.6

ITM2A-201, Transcript of integral membrane protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITM2A, Length 1,641 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2A-201ENST00000373298 NBPF1Q3BBV0 1214 aa13.72□□□□□ -0.21
ITM2A-201ENST00000373298 TBX22Q9Y458 520 aa13.72□□□□□ -0.21
ITM2A-201ENST00000373298 CHD2O14647 1828 aaKnown RBP13.71□□□□□ -0.21
ITM2A-201ENST00000373298 RBM33Q96EV2 1170 aaKnown RBP13.71□□□□□ -0.22
ITM2A-201ENST00000373298 C14orf93Q9H972 538 aaKnown RBP13.71□□□□□ -0.22
ITM2A-201ENST00000373298 ADGRB1O14514 1584 aa13.69□□□□□ -0.22
ITM2A-201ENST00000373298 LTBP4Q8N2S1 1624 aa13.69□□□□□ -0.22
ITM2A-201ENST00000373298 DIP2AQ14689 1571 aa13.69□□□□□ -0.22
ITM2A-201ENST00000373298 KCNA6P17658 529 aa13.68□□□□□ -0.22
ITM2A-201ENST00000373298 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
ITM2A-201ENST00000373298 GABBR2O75899 941 aa13.68□□□□□ -0.22
ITM2A-201ENST00000373298 XRN1Q8IZH2 1706 aaKnown RBP13.67□□□□□ -0.22
ITM2A-201ENST00000373298 STK26Q9P289 416 aa13.67□□□□□ -0.22
ITM2A-201ENST00000373298 AMOTL2Q9Y2J4 779 aa13.67□□□□□ -0.22
ITM2A-201ENST00000373298 NWD1Q149M9 1564 aa13.66□□□□□ -0.22
ITM2A-201ENST00000373298 XIRP1Q702N8 1843 aaKnown RBP13.65□□□□□ -0.22
ITM2A-201ENST00000373298 LAMC1P11047 1609 aa13.65□□□□□ -0.22
ITM2A-201ENST00000373298 KIAA1210Q9ULL0 1709 aa13.65□□□□□ -0.22
ITM2A-201ENST00000373298 STAC3Q96MF2 364 aa13.64□□□□□ -0.23
ITM2A-201ENST00000373298 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
ITM2A-201ENST00000373298 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
ITM2A-201ENST00000373298 PIK3R4Q99570 1358 aa13.63□□□□□ -0.23
ITM2A-201ENST00000373298 PLEKHH1Q9ULM0 1364 aa13.63□□□□□ -0.23
ITM2A-201ENST00000373298 LRRC7Q96NW7 1537 aa13.62□□□□□ -0.23
ITM2A-201ENST00000373298 CHADLQ6NUI6 762 aa13.62□□□□□ -0.23
ITM2A-201ENST00000373298 WAPLQ7Z5K2 1190 aa13.62□□□□□ -0.23
ITM2A-201ENST00000373298 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
ITM2A-201ENST00000373298 TRAK1Q9UPV9 953 aa13.62□□□□□ -0.23
ITM2A-201ENST00000373298 LRPPRCP42704 1394 aaKnown RBP13.62□□□□□ -0.23
ITM2A-201ENST00000373298 RALGAPBQ86X10 1494 aa13.61□□□□□ -0.23
ITM2A-201ENST00000373298 ROCK2O75116 1388 aaKnown RBP13.6□□□□□ -0.23
ITM2A-201ENST00000373298 TMEM94Q12767 1356 aa13.6□□□□□ -0.23
ITM2A-201ENST00000373298 KNDC1Q76NI1 1749 aa13.59□□□□□ -0.23
ITM2A-201ENST00000373298 ABCC11Q96J66 1382 aa13.59□□□□□ -0.23
ITM2A-201ENST00000373298 SAFB2Q14151 953 aaKnown RBP eCLIP13.59□□□□□ -0.23
ITM2A-201ENST00000373298 PROSER2Q86WR7 435 aaPredicted RBP13.59□□□□□ -0.23
ITM2A-201ENST00000373298 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
ITM2A-201ENST00000373298 CPS1P31327 1500 aa13.59□□□□□ -0.23
ITM2A-201ENST00000373298 NKTRP30414 1462 aaKnown RBP13.58□□□□□ -0.23
ITM2A-201ENST00000373298 TECPR2O15040 1411 aa13.58□□□□□ -0.23
ITM2A-201ENST00000373298 GPRASP1Q5JY77 1395 aa13.58□□□□□ -0.23
ITM2A-201ENST00000373298 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.58□□□□□ -0.24
ITM2A-201ENST00000373298 PTCH1Q13635 1447 aa13.57□□□□□ -0.24
ITM2A-201ENST00000373298 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
ITM2A-201ENST00000373298 NALCNQ8IZF0 1738 aa13.56□□□□□ -0.24
ITM2A-201ENST00000373298 PRR29P0C7W0 189 aa13.56□□□□□ -0.24
ITM2A-201ENST00000373298 CARD11Q9BXL7 1154 aa13.56□□□□□ -0.24
ITM2A-201ENST00000373298 CERKQ8TCT0 537 aa13.55□□□□□ -0.24
ITM2A-201ENST00000373298 DLC1Q96QB1 1528 aa13.55□□□□□ -0.24
ITM2A-201ENST00000373298 LHX8Q68G74 356 aa13.53□□□□□ -0.24
ITM2A-201ENST00000373298 HIRIP3Q9BW71 556 aaPredicted RBP13.53□□□□□ -0.24
ITM2A-201ENST00000373298 MINK1Q8N4C8 1332 aaPredicted RBP13.52□□□□□ -0.24
ITM2A-201ENST00000373298 FAM135BQ49AJ0 1406 aa13.52□□□□□ -0.24
ITM2A-201ENST00000373298 C14orf37Q86TY3 774 aa13.51□□□□□ -0.25
ITM2A-201ENST00000373298 POGKQ9P215 609 aa13.51□□□□□ -0.25
ITM2A-201ENST00000373298 QRICH2Q9H0J4 1663 aa13.51□□□□□ -0.25
ITM2A-201ENST00000373298 ADGRL3Q9HAR2 1447 aa13.51□□□□□ -0.25
ITM2A-201ENST00000373298 SIRT1Q96EB6 747 aa13.5□□□□□ -0.25
ITM2A-201ENST00000373298 USP47Q96K76 1375 aa13.5□□□□□ -0.25
ITM2A-201ENST00000373298 ST20-MTHFSA0A0A6YYL1 179 aa13.5□□□□□ -0.25
ITM2A-201ENST00000373298 NUTM2FA1L443 756 aa13.49□□□□□ -0.25
ITM2A-201ENST00000373298 CENPJQ9HC77 1338 aaPredicted RBP13.48□□□□□ -0.25
ITM2A-201ENST00000373298 RGPD8O14715 1765 aaPredicted RBP13.48□□□□□ -0.25
ITM2A-201ENST00000373298 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
ITM2A-201ENST00000373298 C19orf44Q9H6X5 657 aa13.47□□□□□ -0.25
ITM2A-201ENST00000373298 MSH6P52701 1360 aa13.47□□□□□ -0.25
ITM2A-201ENST00000373298 NCOA3Q9Y6Q9 1424 aa13.46□□□□□ -0.25
ITM2A-201ENST00000373298 TESK2Q96S53 571 aa13.46□□□□□ -0.25
ITM2A-201ENST00000373298 TULP4Q9NRJ4 1543 aa13.46□□□□□ -0.25
ITM2A-201ENST00000373298 USP32Q8NFA0 1604 aa13.45□□□□□ -0.26
ITM2A-201ENST00000373298 UBAP1LF5GYI3 381 aa13.45□□□□□ -0.26
ITM2A-201ENST00000373298 HSPA5P11021 654 aaKnown RBP13.45□□□□□ -0.26
ITM2A-201ENST00000373298 ADGRB2O60241 1585 aa13.45□□□□□ -0.26
ITM2A-201ENST00000373298 CDC42BPGQ6DT37 1551 aa13.45□□□□□ -0.26
ITM2A-201ENST00000373298 MST1RQ04912 1400 aa13.44□□□□□ -0.26
ITM2A-201ENST00000373298 FMN2Q9NZ56 1722 aa13.44□□□□□ -0.26
ITM2A-201ENST00000373298 IQSEC2Q5JU85 1478 aa13.44□□□□□ -0.26
ITM2A-201ENST00000373298 PRR36Q9H6K5 1346 aa13.44□□□□□ -0.26
ITM2A-201ENST00000373298 EIF3AQ14152 1382 aaKnown RBP13.43□□□□□ -0.26
ITM2A-201ENST00000373298 WASLO00401 505 aaPredicted RBP13.42□□□□□ -0.26
ITM2A-201ENST00000373298 ATF3P18847 181 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 PIP4K2BP78356 416 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 CDK19Q9BWU1 502 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 CABP2Q9NPB3 220 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 SLAIN2Q9P270 581 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 DISP3Q9P2K9 1392 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 DCCP43146 1447 aa13.42□□□□□ -0.26
ITM2A-201ENST00000373298 C11orf95C9JLR9 678 aaPredicted RBP13.41□□□□□ -0.26
ITM2A-201ENST00000373298 POTEIP0CG38 1075 aa13.41□□□□□ -0.26
ITM2A-201ENST00000373298 CADPS2Q86UW7 1296 aa13.41□□□□□ -0.26
ITM2A-201ENST00000373298 DDX17Q92841 729 aaKnown RBP13.41□□□□□ -0.26
ITM2A-201ENST00000373298 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
ITM2A-201ENST00000373298 C1orf167Q5SNV9 1468 aa13.41□□□□□ -0.26
ITM2A-201ENST00000373298 EIF4G2P78344 907 aaKnown RBP eCLIP13.4□□□□□ -0.26
ITM2A-201ENST00000373298 ROBO1Q9Y6N7 1651 aa13.4□□□□□ -0.26
ITM2A-201ENST00000373298 ATP7BP35670 1465 aa13.4□□□□□ -0.27
ITM2A-201ENST00000373298 SBNO2Q9Y2G9 1366 aa13.39□□□□□ -0.27
ITM2A-201ENST00000373298 CD44P16070 742 aaKnown RBP13.39□□□□□ -0.27
ITM2A-201ENST00000373298 TOM1O60784 492 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms