RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 TULP4Q9NRJ4 1543 aa31.25■■■□□ 2.59
CDK9-201ENST00000373264 MYO5BQ9ULV0 1848 aa31.25■■■□□ 2.59
CDK9-201ENST00000373264 ARHGEF28Q8N1W1 1705 aaKnown RBP31.23■■■□□ 2.59
CDK9-201ENST00000373264 POLR3AO14802 1390 aaPredicted RBP31.23■■■□□ 2.59
CDK9-201ENST00000373264 NPM2Q86SE8 214 aaKnown RBP31.22■■■□□ 2.59
CDK9-201ENST00000373264 TCERG1O14776 1098 aaKnown RBP31.22■■■□□ 2.59
CDK9-201ENST00000373264 NOP58Q9Y2X3 529 aaKnown RBP31.21■■■□□ 2.59
CDK9-201ENST00000373264 PDE4AP27815 886 aa31.21■■■□□ 2.59
CDK9-201ENST00000373264 MTHFSP49914 203 aa31.2■■■□□ 2.59
CDK9-201ENST00000373264 SHPRHQ149N8 1683 aa31.2■■■□□ 2.58
CDK9-201ENST00000373264 EVC2Q86UK5 1308 aa31.19■■■□□ 2.58
CDK9-201ENST00000373264 ANP32AP39687 249 aaKnown RBP31.18■■■□□ 2.58
CDK9-201ENST00000373264 ARHGAP31Q2M1Z3 1444 aa31.18■■■□□ 2.58
CDK9-201ENST00000373264 WWC1Q8IX03 1113 aa31.17■■■□□ 2.58
CDK9-201ENST00000373264 NKTRP30414 1462 aaKnown RBP31.17■■■□□ 2.58
CDK9-201ENST00000373264 FAM69CQ0P6D2 419 aa31.16■■■□□ 2.58
CDK9-201ENST00000373264 CGNL1Q0VF96 1302 aa31.15■■■□□ 2.58
CDK9-201ENST00000373264 E9PSI1 815 aa31.14■■■□□ 2.58
CDK9-201ENST00000373264 IPO9Q96P70 1041 aaKnown RBP31.14■■■□□ 2.58
CDK9-201ENST00000373264 KDM2BQ8NHM5 1336 aa31.14■■■□□ 2.58
CDK9-201ENST00000373264 BACH2Q9BYV9 841 aa31.13■■■□□ 2.57
CDK9-201ENST00000373264 SLC52A1Q9NWF4 448 aa31.13■■■□□ 2.57
CDK9-201ENST00000373264 MINK1Q8N4C8 1332 aaPredicted RBP31.12■■■□□ 2.57
CDK9-201ENST00000373264 PREX1Q8TCU6 1659 aa31.12■■■□□ 2.57
CDK9-201ENST00000373264 SRPK2P78362 688 aaKnown RBP31.11■■■□□ 2.57
CDK9-201ENST00000373264 TCP11L2Q8N4U5 519 aa31.1■■■□□ 2.57
CDK9-201ENST00000373264 ANKRD36BQ8N2N9 1353 aa31.1■■■□□ 2.57
CDK9-201ENST00000373264 TMEM131LA2VDJ0 1609 aa31.09■■■□□ 2.57
CDK9-201ENST00000373264 TSPOAP1O95153 1857 aa31.09■■■□□ 2.57
CDK9-201ENST00000373264 PRAM1Q96QH2 718 aa31.08■■■□□ 2.57
CDK9-201ENST00000373264 GOLGA6L2Q8N9W4 650 aaPredicted RBP31.07■■■□□ 2.56
CDK9-201ENST00000373264 A0A1W2PP64 1363 aa31.06■■■□□ 2.56
CDK9-201ENST00000373264 RUNDC1Q96C34 613 aa31.06■■■□□ 2.56
CDK9-201ENST00000373264 GGNBP2Q9H3C7 697 aa31.06■■■□□ 2.56
CDK9-201ENST00000373264 MS4A1P11836 297 aa31.05■■■□□ 2.56
CDK9-201ENST00000373264 USP32Q8NFA0 1604 aa31.04■■■□□ 2.56
CDK9-201ENST00000373264 NBR1Q14596 966 aa31.03■■■□□ 2.56
CDK9-201ENST00000373264 PTPRMP28827 1452 aa31.02■■■□□ 2.56
CDK9-201ENST00000373264 MLECQ14165 292 aa31.02■■■□□ 2.56
CDK9-201ENST00000373264 ZFYVE9O95405 1425 aa31.02■■■□□ 2.56
CDK9-201ENST00000373264 IQSEC2Q5JU85 1478 aa31.01■■■□□ 2.55
CDK9-201ENST00000373264 POGKQ9P215 609 aa31.01■■■□□ 2.55
CDK9-201ENST00000373264 U2AF1L5P0DN76 240 aaPredicted RBP31■■■□□ 2.55
CDK9-201ENST00000373264 U2AF1Q01081 240 aaKnown RBP eCLIP31■■■□□ 2.552e-8■■□□□ 12.7
CDK9-201ENST00000373264 PANK1Q8TE04 598 aa31■■■□□ 2.55
CDK9-201ENST00000373264 ZBTB47Q9UFB7 747 aaPredicted RBP31■■■□□ 2.55
CDK9-201ENST00000373264 CENPQQ7L2Z9 268 aaPredicted RBP31■■■□□ 2.55
CDK9-201ENST00000373264 STAG3Q9UJ98 1225 aa30.99■■■□□ 2.55
CDK9-201ENST00000373264 YTHDC2Q9H6S0 1430 aaKnown RBP30.98■■■□□ 2.55
CDK9-201ENST00000373264 CFAP53Q96M91 514 aa30.98■■■□□ 2.55
CDK9-201ENST00000373264 PUS7Q96PZ0 661 aaKnown RBP30.98■■■□□ 2.55
CDK9-201ENST00000373264 BCL2L13Q9BXK5 485 aa30.97■■■□□ 2.55
CDK9-201ENST00000373264 TNNQ9UQP3 1299 aa30.97■■■□□ 2.55
CDK9-201ENST00000373264 FRAT1Q92837 279 aaPredicted RBP30.97■■■□□ 2.55
CDK9-201ENST00000373264 RIMBP3CA6NJZ7 1639 aa30.95■■■□□ 2.55
CDK9-201ENST00000373264 RIMBP3BA6NNM3 1639 aa30.95■■■□□ 2.55
CDK9-201ENST00000373264 RIMBP3Q9UFD9 1639 aa30.95■■■□□ 2.55
CDK9-201ENST00000373264 PHF23Q9BUL5 403 aaPredicted RBP30.95■■■□□ 2.55
CDK9-201ENST00000373264 COG6Q9Y2V7 657 aa30.95■■■□□ 2.55
CDK9-201ENST00000373264 DIP2BQ9P265 1576 aa30.95■■■□□ 2.54
CDK9-201ENST00000373264 NGEFQ8N5V2 710 aa30.95■■■□□ 2.54
CDK9-201ENST00000373264 RGS3P49796 1198 aa30.94■■■□□ 2.54
CDK9-201ENST00000373264 ABCC11Q96J66 1382 aa30.93■■■□□ 2.54
CDK9-201ENST00000373264 IGHDP01880 384 aa30.93■■■□□ 2.54
CDK9-201ENST00000373264 FYB1O15117 783 aa30.92■■■□□ 2.54
CDK9-201ENST00000373264 CD163L1Q9NR16 1453 aa30.92■■■□□ 2.54
CDK9-201ENST00000373264 ALKQ9UM73 1620 aa30.92■■■□□ 2.54
CDK9-201ENST00000373264 WAPLQ7Z5K2 1190 aa30.92■■■□□ 2.54
CDK9-201ENST00000373264 CANXP27824 592 aaKnown RBP30.91■■■□□ 2.54
CDK9-201ENST00000373264 U2SURPO15042 1029 aaKnown RBP30.91■■■□□ 2.54
CDK9-201ENST00000373264 FBLN1P23142 703 aa30.91■■■□□ 2.54
CDK9-201ENST00000373264 CDK19Q9BWU1 502 aa30.91■■■□□ 2.54
CDK9-201ENST00000373264 NSD2O96028 1365 aa30.9■■■□□ 2.54
CDK9-201ENST00000373264 RARSP54136 660 aaKnown RBP30.89■■■□□ 2.54
CDK9-201ENST00000373264 CABP1Q9NZU7 370 aa30.89■■■□□ 2.54
CDK9-201ENST00000373264 CLTCQ00610 1675 aaKnown RBP30.88■■■□□ 2.53
CDK9-201ENST00000373264 RLBP1P12271 317 aa30.86■■■□□ 2.53
CDK9-201ENST00000373264 WDR63Q8IWG1 891 aa30.85■■■□□ 2.53
CDK9-201ENST00000373264 TSR2Q969E8 191 aaKnown RBP30.84■■■□□ 2.53
CDK9-201ENST00000373264 TERF2IPQ9NYB0 399 aa30.84■■■□□ 2.53
CDK9-201ENST00000373264 ATAD2Q6PL18 1390 aa30.83■■■□□ 2.53
CDK9-201ENST00000373264 NLRP1Q9C000 1473 aa30.83■■■□□ 2.53
CDK9-201ENST00000373264 PDE3AQ14432 1141 aa30.83■■■□□ 2.53
CDK9-201ENST00000373264 CLUAP1Q96AJ1 413 aa30.83■■■□□ 2.53
CDK9-201ENST00000373264 C8orf34Q49A92 452 aa30.82■■■□□ 2.52
CDK9-201ENST00000373264 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.82■■■□□ 2.52
CDK9-201ENST00000373264 PLEKHF1Q96S99 279 aa30.81■■■□□ 2.52
CDK9-201ENST00000373264 A2ML1A8K2U0 1454 aa30.81■■■□□ 2.52
CDK9-201ENST00000373264 ARHGEF40Q8TER5 1519 aa30.8■■■□□ 2.52
CDK9-201ENST00000373264 CCDC27Q2M243 656 aa30.8■■■□□ 2.52
CDK9-201ENST00000373264 COL3A1P02461 1466 aaPredicted RBP30.8■■■□□ 2.52
CDK9-201ENST00000373264 NINLQ9Y2I6 1382 aa30.79■■■□□ 2.52
CDK9-201ENST00000373264 LAS1LQ9Y4W2 734 aaKnown RBP30.78■■■□□ 2.52
CDK9-201ENST00000373264 RIMS2Q9UQ26 1411 aa30.76■■■□□ 2.52
CDK9-201ENST00000373264 ADGRB2O60241 1585 aa30.76■■■□□ 2.51
CDK9-201ENST00000373264 TRIM35Q9UPQ4 493 aa30.75■■■□□ 2.51
CDK9-201ENST00000373264 PPM1GO15355 546 aaPredicted RBP30.75■■■□□ 2.51
CDK9-201ENST00000373264 TMPOP42166 694 aaKnown RBP30.75■■■□□ 2.51
CDK9-201ENST00000373264 HDGFL2Q7Z4V5 671 aaPredicted RBP30.75■■■□□ 2.51
CDK9-201ENST00000373264 FAM161AQ3B820 660 aa30.74■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms