RNA–Protein interactions for RNA: ENST00000372447.7

C9orf78-201, Transcript of chromosome 9 open reading frame 78, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf78, Length 1,795 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf78-201ENST00000372447 SCAF1Q9H7N4 1312 aaKnown RBP22.31■■□□□ 1.16
C9orf78-201ENST00000372447 ARHGEF28Q8N1W1 1705 aaKnown RBP22.29■■□□□ 1.16
C9orf78-201ENST00000372447 C14orf37Q86TY3 774 aa22.29■■□□□ 1.16
C9orf78-201ENST00000372447 NCOA3Q9Y6Q9 1424 aa22.29■■□□□ 1.16
C9orf78-201ENST00000372447 CENPJQ9HC77 1338 aaPredicted RBP22.28■■□□□ 1.16
C9orf78-201ENST00000372447 CERKQ8TCT0 537 aa22.28■■□□□ 1.16
C9orf78-201ENST00000372447 EIF3AQ14152 1382 aaKnown RBP22.27■■□□□ 1.16
C9orf78-201ENST00000372447 USP47Q96K76 1375 aa22.27■■□□□ 1.16
C9orf78-201ENST00000372447 XIRP1Q702N8 1843 aaKnown RBP22.27■■□□□ 1.16
C9orf78-201ENST00000372447 ST20-MTHFSA0A0A6YYL1 179 aa22.26■■□□□ 1.15
C9orf78-201ENST00000372447 C19orf44Q9H6X5 657 aa22.25■■□□□ 1.15
C9orf78-201ENST00000372447 MINK1Q8N4C8 1332 aaPredicted RBP22.25■■□□□ 1.15
C9orf78-201ENST00000372447 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.25■■□□□ 1.15
C9orf78-201ENST00000372447 ADGRL3Q9HAR2 1447 aa22.24■■□□□ 1.15
C9orf78-201ENST00000372447 WASHC2AQ641Q2 1341 aa22.24■■□□□ 1.15
C9orf78-201ENST00000372447 MSH6P52701 1360 aa22.22■■□□□ 1.15
C9orf78-201ENST00000372447 ANP32CO43423 234 aa22.22■■□□□ 1.15
C9orf78-201ENST00000372447 NALCNQ8IZF0 1738 aa22.2■■□□□ 1.14
C9orf78-201ENST00000372447 TESK2Q96S53 571 aa22.2■■□□□ 1.14
C9orf78-201ENST00000372447 IQSEC2Q5JU85 1478 aa22.18■■□□□ 1.14
C9orf78-201ENST00000372447 ATF3P18847 181 aa22.17■■□□□ 1.14
C9orf78-201ENST00000372447 QRICH2Q9H0J4 1663 aa22.17■■□□□ 1.14
C9orf78-201ENST00000372447 CADPS2Q86UW7 1296 aa22.17■■□□□ 1.14
C9orf78-201ENST00000372447 SBNO2Q9Y2G9 1366 aa22.16■■□□□ 1.14
C9orf78-201ENST00000372447 WASLO00401 505 aaPredicted RBP22.16■■□□□ 1.14
C9orf78-201ENST00000372447 DCCP43146 1447 aa22.15■■□□□ 1.14
C9orf78-201ENST00000372447 CCDC7Q96M83 1385 aa22.15■■□□□ 1.14
C9orf78-201ENST00000372447 C11orf95C9JLR9 678 aaPredicted RBP22.15■■□□□ 1.14
C9orf78-201ENST00000372447 CCER2I3L3R5 266 aa22.15■■□□□ 1.14
C9orf78-201ENST00000372447 CDK19Q9BWU1 502 aa22.15■■□□□ 1.14
C9orf78-201ENST00000372447 NUTM2FA1L443 756 aa22.14■■□□□ 1.13
C9orf78-201ENST00000372447 ADGRB2O60241 1585 aa22.14■■□□□ 1.13
C9orf78-201ENST00000372447 CDC42BPGQ6DT37 1551 aa22.13■■□□□ 1.13
C9orf78-201ENST00000372447 EVC2Q86UK5 1308 aa22.12■■□□□ 1.13
C9orf78-201ENST00000372447 SLAIN2Q9P270 581 aa22.12■■□□□ 1.13
C9orf78-201ENST00000372447 UBAP1LF5GYI3 381 aa22.11■■□□□ 1.13
C9orf78-201ENST00000372447 TOM1O60784 492 aa22.11■■□□□ 1.13
C9orf78-201ENST00000372447 GTF3C3Q9Y5Q9 886 aa22.11■■□□□ 1.13
C9orf78-201ENST00000372447 TULP4Q9NRJ4 1543 aa22.11■■□□□ 1.13
C9orf78-201ENST00000372447 MST1RQ04912 1400 aa22.1■■□□□ 1.13
C9orf78-201ENST00000372447 SLC24A1O60721 1099 aa22.1■■□□□ 1.13
C9orf78-201ENST00000372447 SRPK2P78362 688 aaKnown RBP22.1■■□□□ 1.13
C9orf78-201ENST00000372447 CABP2Q9NPB3 220 aa22.1■■□□□ 1.13
C9orf78-201ENST00000372447 KIF7Q2M1P5 1343 aa22.08■■□□□ 1.12
C9orf78-201ENST00000372447 TMF1P82094 1093 aa22.07■■□□□ 1.12
C9orf78-201ENST00000372447 DISP3Q9P2K9 1392 aa22.07■■□□□ 1.12
C9orf78-201ENST00000372447 PRR36Q9H6K5 1346 aa22.07■■□□□ 1.12
C9orf78-201ENST00000372447 C1orf167Q5SNV9 1468 aa22.07■■□□□ 1.12
C9orf78-201ENST00000372447 FMN2Q9NZ56 1722 aa22.06■■□□□ 1.12
C9orf78-201ENST00000372447 NUDT16Q96DE0 195 aaKnown RBP22.06■■□□□ 1.12
C9orf78-201ENST00000372447 ORAI2Q96SN7 254 aa22.04■■□□□ 1.12
C9orf78-201ENST00000372447 PIP4K2BP78356 416 aa22.04■■□□□ 1.12
C9orf78-201ENST00000372447 ESCO1Q5FWF5 840 aa22.04■■□□□ 1.12
C9orf78-201ENST00000372447 ANKARQ7Z5J8 1434 aa22.03■■□□□ 1.12
C9orf78-201ENST00000372447 USP32Q8NFA0 1604 aa22.02■■□□□ 1.12
C9orf78-201ENST00000372447 ATP7BP35670 1465 aa22.02■■□□□ 1.12
C9orf78-201ENST00000372447 CCDC61Q9Y6R9 512 aa22.02■■□□□ 1.11
C9orf78-201ENST00000372447 BRINP3Q76B58 766 aa22.01■■□□□ 1.11
C9orf78-201ENST00000372447 PUS7Q96PZ0 661 aaKnown RBP22.01■■□□□ 1.11
C9orf78-201ENST00000372447 CDCA8Q53HL2 280 aa21.99■■□□□ 1.11
C9orf78-201ENST00000372447 RGPD8O14715 1765 aaPredicted RBP21.99■■□□□ 1.11
C9orf78-201ENST00000372447 PMFBP1Q8TBY8 1022 aa21.98■■□□□ 1.11
C9orf78-201ENST00000372447 CABP1Q9NZU7 370 aa21.98■■□□□ 1.11
C9orf78-201ENST00000372447 ATAD2Q6PL18 1390 aa21.97■■□□□ 1.11
C9orf78-201ENST00000372447 PHF8Q9UPP1 1060 aa21.97■■□□□ 1.11
C9orf78-201ENST00000372447 PPIP5K1Q6PFW1 1433 aa21.95■■□□□ 1.11
C9orf78-201ENST00000372447 PLEKHG3A1L390 1219 aa21.95■■□□□ 1.1
C9orf78-201ENST00000372447 POLR3GLQ9BT43 218 aa21.95■■□□□ 1.1
C9orf78-201ENST00000372447 FOXO3O43524 673 aa21.94■■□□□ 1.1
C9orf78-201ENST00000372447 SLC12A5Q9H2X9 1139 aa21.94■■□□□ 1.1
C9orf78-201ENST00000372447 TMC1Q8TDI8 760 aa21.94■■□□□ 1.1
C9orf78-201ENST00000372447 DDX17Q92841 729 aaKnown RBP21.94■■□□□ 1.1
C9orf78-201ENST00000372447 ROBO1Q9Y6N7 1651 aa21.94■■□□□ 1.1
C9orf78-201ENST00000372447 TOPAZ1Q8N9V7 1692 aa21.92■■□□□ 1.1
C9orf78-201ENST00000372447 FBXO41Q8TF61 875 aa21.92■■□□□ 1.1
C9orf78-201ENST00000372447 ACEP12821 1306 aa21.91■■□□□ 1.1
C9orf78-201ENST00000372447 NGDNQ8NEJ9 315 aaKnown RBP21.91■■□□□ 1.1
C9orf78-201ENST00000372447 PRKRIP1Q9H875 184 aaPredicted RBP21.9■■□□□ 1.1
C9orf78-201ENST00000372447 ITSN1Q15811 1721 aa21.9■■□□□ 1.1
C9orf78-201ENST00000372447 POLR3AO14802 1390 aaPredicted RBP21.89■■□□□ 1.09
C9orf78-201ENST00000372447 XPCQ01831 940 aaPredicted RBP21.88■■□□□ 1.09
C9orf78-201ENST00000372447 NPHP3Q7Z494 1330 aa21.88■■□□□ 1.09
C9orf78-201ENST00000372447 PSME1Q06323 249 aa21.87■■□□□ 1.09
C9orf78-201ENST00000372447 KIF1AQ12756 1690 aa21.87■■□□□ 1.09
C9orf78-201ENST00000372447 NINLQ9Y2I6 1382 aa21.87■■□□□ 1.09
C9orf78-201ENST00000372447 KRT28Q7Z3Y7 464 aa21.85■■□□□ 1.09
C9orf78-201ENST00000372447 CD163L1Q9NR16 1453 aa21.85■■□□□ 1.09
C9orf78-201ENST00000372447 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
C9orf78-201ENST00000372447 SOS2Q07890 1332 aaPredicted RBP21.84■■□□□ 1.09
C9orf78-201ENST00000372447 ZNF692Q9BU19 519 aaPredicted RBP21.84■■□□□ 1.09
C9orf78-201ENST00000372447 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
C9orf78-201ENST00000372447 AHDC1Q5TGY3 1603 aaPredicted RBP21.83■■□□□ 1.08
C9orf78-201ENST00000372447 NHSL1Q5SYE7 1610 aa21.82■■□□□ 1.08
C9orf78-201ENST00000372447 HSPA1LP34931 641 aa21.82■■□□□ 1.08
C9orf78-201ENST00000372447 HDGFL2Q7Z4V5 671 aaPredicted RBP21.82■■□□□ 1.08
C9orf78-201ENST00000372447 MYOM1P52179 1685 aa21.82■■□□□ 1.08
C9orf78-201ENST00000372447 A0A1W2PP64 1363 aa21.82■■□□□ 1.08
C9orf78-201ENST00000372447 PXDNQ92626 1479 aa21.82■■□□□ 1.08
C9orf78-201ENST00000372447 KTN1Q86UP2 1357 aaKnown RBP21.81■■□□□ 1.08
C9orf78-201ENST00000372447 ANKRD36BQ8N2N9 1353 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms