RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CFAP65Q6ZU64 1925 aaKnown RBP24.87■■□□□ 1.57
TMEM53-202ENST00000372237 DMRT2Q9Y5R5 561 aa24.86■■□□□ 1.57
TMEM53-202ENST00000372237 NSD3Q9BZ95 1437 aa24.86■■□□□ 1.57
TMEM53-202ENST00000372237 FAM161AQ3B820 660 aa24.85■■□□□ 1.57
TMEM53-202ENST00000372237 MORC1Q86VD1 984 aa24.85■■□□□ 1.57
TMEM53-202ENST00000372237 PPLO60437 1756 aa24.84■■□□□ 1.57
TMEM53-202ENST00000372237 C14orf93Q9H972 538 aaKnown RBP24.84■■□□□ 1.57
TMEM53-202ENST00000372237 QRICH2Q9H0J4 1663 aa24.83■■□□□ 1.57
TMEM53-202ENST00000372237 PPM1GO15355 546 aaPredicted RBP24.83■■□□□ 1.56
TMEM53-202ENST00000372237 NEFMP07197 916 aa24.83■■□□□ 1.56
TMEM53-202ENST00000372237 WWC1Q8IX03 1113 aa24.83■■□□□ 1.56
TMEM53-202ENST00000372237 ZC3H13Q5T200 1668 aaKnown RBP24.82■■□□□ 1.56
TMEM53-202ENST00000372237 SLC12A5Q9H2X9 1139 aa24.82■■□□□ 1.56
TMEM53-202ENST00000372237 USP35Q9P2H5 1018 aa24.81■■□□□ 1.56
TMEM53-202ENST00000372237 TNNT2P45379 298 aaPredicted RBP24.81■■□□□ 1.56
TMEM53-202ENST00000372237 RGS3P49796 1198 aa24.81■■□□□ 1.56
TMEM53-202ENST00000372237 C8orf34Q49A92 452 aa24.81■■□□□ 1.56
TMEM53-202ENST00000372237 ADGRB1O14514 1584 aa24.79■■□□□ 1.56
TMEM53-202ENST00000372237 TMEM132EQ6IEE7 984 aa24.79■■□□□ 1.56
TMEM53-202ENST00000372237 SHPRHQ149N8 1683 aa24.79■■□□□ 1.56
TMEM53-202ENST00000372237 PDE3AQ14432 1141 aa24.78■■□□□ 1.56
TMEM53-202ENST00000372237 TSPOAP1O95153 1857 aa24.77■■□□□ 1.56
TMEM53-202ENST00000372237 CGNL1Q0VF96 1302 aa24.77■■□□□ 1.56
TMEM53-202ENST00000372237 RPGRIP1LQ68CZ1 1315 aa24.77■■□□□ 1.56
TMEM53-202ENST00000372237 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
TMEM53-202ENST00000372237 NEUROD2Q15784 382 aa24.77■■□□□ 1.56
TMEM53-202ENST00000372237 RUNDC1Q96C34 613 aa24.76■■□□□ 1.55
TMEM53-202ENST00000372237 NINLQ9Y2I6 1382 aa24.76■■□□□ 1.55
TMEM53-202ENST00000372237 CAMSAP1Q5T5Y3 1602 aa24.76■■□□□ 1.55
TMEM53-202ENST00000372237 ARHGAP31Q2M1Z3 1444 aa24.75■■□□□ 1.55
TMEM53-202ENST00000372237 DAXXQ9UER7 740 aaPredicted RBP24.75■■□□□ 1.55
TMEM53-202ENST00000372237 RRP7AQ9Y3A4 280 aaKnown RBP24.73■■□□□ 1.55
TMEM53-202ENST00000372237 USP32Q8NFA0 1604 aa24.72■■□□□ 1.55
TMEM53-202ENST00000372237 TCP11L2Q8N4U5 519 aa24.72■■□□□ 1.55
TMEM53-202ENST00000372237 IGHDP01880 384 aa24.72■■□□□ 1.55
TMEM53-202ENST00000372237 MTHFSP49914 203 aa24.71■■□□□ 1.55
TMEM53-202ENST00000372237 CLUAP1Q96AJ1 413 aa24.7■■□□□ 1.55
TMEM53-202ENST00000372237 COG6Q9Y2V7 657 aa24.7■■□□□ 1.55
TMEM53-202ENST00000372237 SIGLEC1Q9BZZ2 1709 aa24.7■■□□□ 1.54
TMEM53-202ENST00000372237 PANK1Q8TE04 598 aa24.7■■□□□ 1.54
TMEM53-202ENST00000372237 CFAP53Q96M91 514 aa24.7■■□□□ 1.54
TMEM53-202ENST00000372237 IQSEC2Q5JU85 1478 aa24.7■■□□□ 1.54
TMEM53-202ENST00000372237 SLC4A3P48751 1232 aa24.69■■□□□ 1.54
TMEM53-202ENST00000372237 FRAT1Q92837 279 aaPredicted RBP24.69■■□□□ 1.54
TMEM53-202ENST00000372237 EVC2Q86UK5 1308 aa24.69■■□□□ 1.54
TMEM53-202ENST00000372237 NUTM2DQ5VT03 806 aaPredicted RBP24.68■■□□□ 1.54
TMEM53-202ENST00000372237 VGFO15240 615 aaPredicted RBP24.67■■□□□ 1.54
TMEM53-202ENST00000372237 WDR63Q8IWG1 891 aa24.67■■□□□ 1.54
TMEM53-202ENST00000372237 PHF23Q9BUL5 403 aaPredicted RBP24.66■■□□□ 1.54
TMEM53-202ENST00000372237 RARSP54136 660 aaKnown RBP24.66■■□□□ 1.54
TMEM53-202ENST00000372237 IDI1Q13907 227 aa24.66■■□□□ 1.54
TMEM53-202ENST00000372237 PUS7Q96PZ0 661 aaKnown RBP24.66■■□□□ 1.54
TMEM53-202ENST00000372237 ARHGEF28Q8N1W1 1705 aaKnown RBP24.65■■□□□ 1.54
TMEM53-202ENST00000372237 ANKRD36BQ8N2N9 1353 aa24.65■■□□□ 1.54
TMEM53-202ENST00000372237 PIK3C2BO00750 1634 aa24.64■■□□□ 1.54
TMEM53-202ENST00000372237 SLC52A1Q9NWF4 448 aa24.64■■□□□ 1.53
TMEM53-202ENST00000372237 NSD2O96028 1365 aa24.63■■□□□ 1.53
TMEM53-202ENST00000372237 TULP4Q9NRJ4 1543 aa24.63■■□□□ 1.53
TMEM53-202ENST00000372237 CCDC27Q2M243 656 aa24.63■■□□□ 1.53
TMEM53-202ENST00000372237 VIRMAQ69YN4 1812 aaKnown RBP24.62■■□□□ 1.53
TMEM53-202ENST00000372237 MAPK8IP3Q9UPT6 1336 aa24.62■■□□□ 1.53
TMEM53-202ENST00000372237 NEXMIFQ5QGS0 1516 aa24.62■■□□□ 1.53
TMEM53-202ENST00000372237 REREQ9P2R6 1566 aa24.62■■□□□ 1.53
TMEM53-202ENST00000372237 KIF13AQ9H1H9 1805 aa24.62■■□□□ 1.53
TMEM53-202ENST00000372237 AGLP35573 1532 aa24.6■■□□□ 1.53
TMEM53-202ENST00000372237 NFKBIBQ15653 356 aa24.6■■□□□ 1.53
TMEM53-202ENST00000372237 CABP2Q9NPB3 220 aa24.6■■□□□ 1.53
TMEM53-202ENST00000372237 PPP6R1Q9UPN7 881 aa24.6■■□□□ 1.53
TMEM53-202ENST00000372237 U2AF1L5P0DN76 240 aaPredicted RBP24.59■■□□□ 1.53
TMEM53-202ENST00000372237 U2AF1Q01081 240 aaKnown RBP eCLIP24.59■■□□□ 1.53
TMEM53-202ENST00000372237 AAMPQ13685 434 aa24.59■■□□□ 1.53
TMEM53-202ENST00000372237 SAFB2Q14151 953 aaKnown RBP eCLIP24.58■■□□□ 1.53
TMEM53-202ENST00000372237 FBXO31Q5XUX0 539 aaPredicted RBP24.58■■□□□ 1.53
TMEM53-202ENST00000372237 PMFBP1Q8TBY8 1022 aa24.58■■□□□ 1.53
TMEM53-202ENST00000372237 BCL2L13Q9BXK5 485 aa24.58■■□□□ 1.53
TMEM53-202ENST00000372237 MYH16Q9H6N6 1097 aa24.58■■□□□ 1.53
TMEM53-202ENST00000372237 NCBP3Q53F19 620 aaKnown RBP24.56■■□□□ 1.52
TMEM53-202ENST00000372237 RLBP1P12271 317 aa24.55■■□□□ 1.52
TMEM53-202ENST00000372237 TNNQ9UQP3 1299 aa24.54■■□□□ 1.52
TMEM53-202ENST00000372237 PREX1Q8TCU6 1659 aa24.53■■□□□ 1.52
TMEM53-202ENST00000372237 PCDHB15Q9Y5E8 787 aa24.52■■□□□ 1.52
TMEM53-202ENST00000372237 SRPK2P78362 688 aaKnown RBP24.52■■□□□ 1.52
TMEM53-202ENST00000372237 STK26Q9P289 416 aa24.52■■□□□ 1.52
TMEM53-202ENST00000372237 A0A1W2PP64 1363 aa24.52■■□□□ 1.51
TMEM53-202ENST00000372237 ADGRB2O60241 1585 aa24.51■■□□□ 1.51
TMEM53-202ENST00000372237 ABCC11Q96J66 1382 aa24.5■■□□□ 1.51
TMEM53-202ENST00000372237 MLECQ14165 292 aa24.5■■□□□ 1.51
TMEM53-202ENST00000372237 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
TMEM53-202ENST00000372237 USP19O94966 1318 aa24.5■■□□□ 1.51
TMEM53-202ENST00000372237 ZFYVE9O95405 1425 aa24.49■■□□□ 1.51
TMEM53-202ENST00000372237 ARHGEF40Q8TER5 1519 aa24.48■■□□□ 1.51
TMEM53-202ENST00000372237 U2SURPO15042 1029 aaKnown RBP24.47■■□□□ 1.51
TMEM53-202ENST00000372237 SEC24BO95487 1268 aa24.47■■□□□ 1.51
TMEM53-202ENST00000372237 GGNBP2Q9H3C7 697 aa24.47■■□□□ 1.51
TMEM53-202ENST00000372237 GSE1Q14687 1217 aa24.47■■□□□ 1.51
TMEM53-202ENST00000372237 TMEM131LA2VDJ0 1609 aa24.47■■□□□ 1.51
TMEM53-202ENST00000372237 RWDD1Q9H446 243 aaPredicted RBP24.46■■□□□ 1.51
TMEM53-202ENST00000372237 MYO5BQ9ULV0 1848 aa24.45■■□□□ 1.51
TMEM53-202ENST00000372237 MVPQ14764 893 aaKnown RBP24.45■■□□□ 1.51
TMEM53-202ENST00000372237 ZKSCAN2Q63HK3 967 aa24.45■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms