RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.97■■□□□ 1.59
CCDC17-201ENST00000372044 XRN1Q8IZH2 1706 aaKnown RBP24.97■■□□□ 1.59
CCDC17-201ENST00000372044 ROBO2Q9HCK4 1378 aa24.97■■□□□ 1.59
CCDC17-201ENST00000372044 CABP2Q9NPB3 220 aa24.97■■□□□ 1.59
CCDC17-201ENST00000372044 CHD2O14647 1828 aaKnown RBP24.96■■□□□ 1.59
CCDC17-201ENST00000372044 TBX22Q9Y458 520 aa24.96■■□□□ 1.59
CCDC17-201ENST00000372044 FAM135BQ49AJ0 1406 aa24.95■■□□□ 1.58
CCDC17-201ENST00000372044 ANKLE2Q86XL3 938 aa24.94■■□□□ 1.58
CCDC17-201ENST00000372044 SLC12A5Q9H2X9 1139 aa24.93■■□□□ 1.58
CCDC17-201ENST00000372044 TMC1Q8TDI8 760 aa24.91■■□□□ 1.58
CCDC17-201ENST00000372044 SRPK2P78362 688 aaKnown RBP24.9■■□□□ 1.58
CCDC17-201ENST00000372044 CC2D1BQ5T0F9 858 aaKnown RBP24.9■■□□□ 1.58
CCDC17-201ENST00000372044 CARD14Q9BXL6 1004 aa24.9■■□□□ 1.58
CCDC17-201ENST00000372044 SIRT1Q96EB6 747 aa24.89■■□□□ 1.58
CCDC17-201ENST00000372044 PARD3Q8TEW0 1356 aa24.89■■□□□ 1.58
CCDC17-201ENST00000372044 PUS7Q96PZ0 661 aaKnown RBP24.89■■□□□ 1.57
CCDC17-201ENST00000372044 CDK19Q9BWU1 502 aa24.89■■□□□ 1.57
CCDC17-201ENST00000372044 AMOTL2Q9Y2J4 779 aa24.89■■□□□ 1.57
CCDC17-201ENST00000372044 KTN1Q86UP2 1357 aaKnown RBP24.88■■□□□ 1.57
CCDC17-201ENST00000372044 AMER1Q5JTC6 1135 aaPredicted RBP24.87■■□□□ 1.57
CCDC17-201ENST00000372044 ADGRB2O60241 1585 aa24.87■■□□□ 1.57
CCDC17-201ENST00000372044 KNSTRNQ9Y448 316 aa24.86■■□□□ 1.57
CCDC17-201ENST00000372044 NCKAP5LQ9HCH0 1330 aa24.86■■□□□ 1.57
CCDC17-201ENST00000372044 NPHP4O75161 1426 aaPredicted RBP24.85■■□□□ 1.57
CCDC17-201ENST00000372044 PTCH1Q13635 1447 aa24.85■■□□□ 1.57
CCDC17-201ENST00000372044 RGPD8O14715 1765 aaPredicted RBP24.83■■□□□ 1.57
CCDC17-201ENST00000372044 CD163L1Q9NR16 1453 aa24.83■■□□□ 1.57
CCDC17-201ENST00000372044 RALBP1Q15311 655 aa24.83■■□□□ 1.56
CCDC17-201ENST00000372044 MRS2Q9HD23 443 aa24.83■■□□□ 1.56
CCDC17-201ENST00000372044 USP32Q8NFA0 1604 aa24.83■■□□□ 1.56
CCDC17-201ENST00000372044 ATAD2Q6PL18 1390 aa24.82■■□□□ 1.56
CCDC17-201ENST00000372044 NSD3Q9BZ95 1437 aa24.82■■□□□ 1.56
CCDC17-201ENST00000372044 PIK3R4Q99570 1358 aa24.82■■□□□ 1.56
CCDC17-201ENST00000372044 WASLO00401 505 aaPredicted RBP24.81■■□□□ 1.56
CCDC17-201ENST00000372044 KCNA6P17658 529 aa24.81■■□□□ 1.56
CCDC17-201ENST00000372044 MYBBP1AQ9BQG0 1328 aaKnown RBP24.81■■□□□ 1.56
CCDC17-201ENST00000372044 ANKRD36BQ8N2N9 1353 aa24.81■■□□□ 1.56
CCDC17-201ENST00000372044 A0A1W2PP64 1363 aa24.79■■□□□ 1.56
CCDC17-201ENST00000372044 NALCNQ8IZF0 1738 aa24.78■■□□□ 1.56
CCDC17-201ENST00000372044 TOPAZ1Q8N9V7 1692 aa24.78■■□□□ 1.56
CCDC17-201ENST00000372044 HSPA2P54652 639 aa24.78■■□□□ 1.56
CCDC17-201ENST00000372044 LMTK3Q96Q04 1460 aa24.78■■□□□ 1.56
CCDC17-201ENST00000372044 NINLQ9Y2I6 1382 aa24.77■■□□□ 1.56
CCDC17-201ENST00000372044 NPC1L1Q9UHC9 1359 aa24.77■■□□□ 1.56
CCDC17-201ENST00000372044 ATP7BP35670 1465 aa24.76■■□□□ 1.55
CCDC17-201ENST00000372044 AKAP12Q02952 1782 aa24.76■■□□□ 1.55
CCDC17-201ENST00000372044 ITSN1Q15811 1721 aa24.76■■□□□ 1.55
CCDC17-201ENST00000372044 STRCQ7RTU9 1775 aa24.75■■□□□ 1.55
CCDC17-201ENST00000372044 CABP1Q9NZU7 370 aa24.75■■□□□ 1.55
CCDC17-201ENST00000372044 PRR36Q9H6K5 1346 aa24.74■■□□□ 1.55
CCDC17-201ENST00000372044 KIF20BQ96Q89 1820 aa24.74■■□□□ 1.55
CCDC17-201ENST00000372044 STRCP1A6NGW2 1772 aa24.74■■□□□ 1.55
CCDC17-201ENST00000372044 ANKRD26Q9UPS8 1709 aa24.73■■□□□ 1.55
CCDC17-201ENST00000372044 MON2Q7Z3U7 1717 aa24.72■■□□□ 1.55
CCDC17-201ENST00000372044 NWD1Q149M9 1564 aa24.72■■□□□ 1.55
CCDC17-201ENST00000372044 PPIP5K1Q6PFW1 1433 aa24.72■■□□□ 1.55
CCDC17-201ENST00000372044 NUDT16Q96DE0 195 aaKnown RBP24.72■■□□□ 1.55
CCDC17-201ENST00000372044 BRD4O60885 1362 aaPredicted RBP24.72■■□□□ 1.55
CCDC17-201ENST00000372044 FAM9BQ8IZU0 186 aa24.71■■□□□ 1.55
CCDC17-201ENST00000372044 FMN2Q9NZ56 1722 aa24.7■■□□□ 1.55
CCDC17-201ENST00000372044 CDC42BPGQ6DT37 1551 aa24.7■■□□□ 1.54
CCDC17-201ENST00000372044 NUTM2FA1L443 756 aa24.7■■□□□ 1.54
CCDC17-201ENST00000372044 NLRP13Q86W25 1043 aa24.7■■□□□ 1.54
CCDC17-201ENST00000372044 RBM33Q96EV2 1170 aaKnown RBP24.69■■□□□ 1.54
CCDC17-201ENST00000372044 CENPBP07199 599 aaPredicted RBP24.67■■□□□ 1.54
CCDC17-201ENST00000372044 PPP2R1AP30153 589 aa24.67■■□□□ 1.54
CCDC17-201ENST00000372044 TERF2IPQ9NYB0 399 aa24.67■■□□□ 1.54
CCDC17-201ENST00000372044 NKTRP30414 1462 aaKnown RBP24.66■■□□□ 1.54
CCDC17-201ENST00000372044 CPSF1Q10570 1443 aaKnown RBP24.65■■□□□ 1.54
CCDC17-201ENST00000372044 PNISRQ8TF01 805 aaKnown RBP24.65■■□□□ 1.54
CCDC17-201ENST00000372044 CCDC61Q9Y6R9 512 aa24.65■■□□□ 1.54
CCDC17-201ENST00000372044 CGNL1Q0VF96 1302 aa24.65■■□□□ 1.54
CCDC17-201ENST00000372044 HDGFL2Q7Z4V5 671 aaPredicted RBP24.63■■□□□ 1.53
CCDC17-201ENST00000372044 NRKQ7Z2Y5 1582 aa24.62■■□□□ 1.53
CCDC17-201ENST00000372044 FYB1O15117 783 aa24.58■■□□□ 1.53
CCDC17-201ENST00000372044 HNRNPUQ00839 825 aaKnown RBP eCLIP24.58■■□□□ 1.53
CCDC17-201ENST00000372044 MORC1Q86VD1 984 aa24.58■■□□□ 1.53
CCDC17-201ENST00000372044 NSD2O96028 1365 aa24.58■■□□□ 1.53
CCDC17-201ENST00000372044 TNNT2P45379 298 aaPredicted RBP24.58■■□□□ 1.52
CCDC17-201ENST00000372044 GGNBP2Q9H3C7 697 aa24.58■■□□□ 1.52
CCDC17-201ENST00000372044 ADGRL3Q9HAR2 1447 aa24.57■■□□□ 1.52
CCDC17-201ENST00000372044 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.56■■□□□ 1.52
CCDC17-201ENST00000372044 XIRP1Q702N8 1843 aaKnown RBP24.56■■□□□ 1.52
CCDC17-201ENST00000372044 EDC4Q6P2E9 1401 aaKnown RBP24.56■■□□□ 1.52
CCDC17-201ENST00000372044 MAP2P11137 1827 aaKnown RBP24.55■■□□□ 1.52
CCDC17-201ENST00000372044 ACEP12821 1306 aa24.54■■□□□ 1.52
CCDC17-201ENST00000372044 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
CCDC17-201ENST00000372044 PLEKHG3A1L390 1219 aa24.53■■□□□ 1.52
CCDC17-201ENST00000372044 ANKARQ7Z5J8 1434 aa24.53■■□□□ 1.52
CCDC17-201ENST00000372044 PMFBP1Q8TBY8 1022 aa24.52■■□□□ 1.52
CCDC17-201ENST00000372044 SENP3-EIF4A1A0A087X0R7 540 aa24.5■■□□□ 1.51
CCDC17-201ENST00000372044 PROSER2Q86WR7 435 aaPredicted RBP24.5■■□□□ 1.51
CCDC17-201ENST00000372044 ZRANB1Q9UGI0 708 aa24.49■■□□□ 1.51
CCDC17-201ENST00000372044 USP6P35125 1406 aa24.49■■□□□ 1.51
CCDC17-201ENST00000372044 NME9Q86XW9 330 aa24.49■■□□□ 1.51
CCDC17-201ENST00000372044 POLR3AO14802 1390 aaPredicted RBP24.47■■□□□ 1.51
CCDC17-201ENST00000372044 C14orf37Q86TY3 774 aa24.47■■□□□ 1.51
CCDC17-201ENST00000372044 ZNF692Q9BU19 519 aaPredicted RBP24.47■■□□□ 1.51
CCDC17-201ENST00000372044 SSH2Q76I76 1423 aa24.45■■□□□ 1.5
CCDC17-201ENST00000372044 MTHFSP49914 203 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms