RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 ADGRB1O14514 1584 aa15.49■□□□□ 0.07
TSPAN1-201ENST00000372003 SETD1AO15047 1707 aaKnown RBP15.49■□□□□ 0.07
TSPAN1-201ENST00000372003 CERKQ8TCT0 537 aa15.49■□□□□ 0.07
TSPAN1-201ENST00000372003 PRAM1Q96QH2 718 aa15.49■□□□□ 0.07
TSPAN1-201ENST00000372003 LAMC1P11047 1609 aa15.48■□□□□ 0.07
TSPAN1-201ENST00000372003 CPS1P31327 1500 aa15.47■□□□□ 0.07
TSPAN1-201ENST00000372003 LRRC7Q96NW7 1537 aa15.47■□□□□ 0.07
TSPAN1-201ENST00000372003 STRCP1A6NGW2 1772 aa15.47■□□□□ 0.07
TSPAN1-201ENST00000372003 CHD2O14647 1828 aaKnown RBP15.47■□□□□ 0.07
TSPAN1-201ENST00000372003 CCDC7Q96M83 1385 aa15.47■□□□□ 0.07
TSPAN1-201ENST00000372003 PLEKHH1Q9ULM0 1364 aa15.47■□□□□ 0.07
TSPAN1-201ENST00000372003 NWD1Q149M9 1564 aa15.47■□□□□ 0.07
TSPAN1-201ENST00000372003 NKTRP30414 1462 aaKnown RBP15.46■□□□□ 0.07
TSPAN1-201ENST00000372003 RALGAPBQ86X10 1494 aa15.46■□□□□ 0.06
TSPAN1-201ENST00000372003 TRPM1Q7Z4N2 1603 aa15.45■□□□□ 0.06
TSPAN1-201ENST00000372003 SIRT1Q96EB6 747 aa15.45■□□□□ 0.06
TSPAN1-201ENST00000372003 PRKRIP1Q9H875 184 aaPredicted RBP15.45■□□□□ 0.06
TSPAN1-201ENST00000372003 TECPR2O15040 1411 aa15.44■□□□□ 0.06
TSPAN1-201ENST00000372003 GPRASP1Q5JY77 1395 aa15.44■□□□□ 0.06
TSPAN1-201ENST00000372003 XRN1Q8IZH2 1706 aaKnown RBP15.44■□□□□ 0.06
TSPAN1-201ENST00000372003 KIAA1210Q9ULL0 1709 aa15.44■□□□□ 0.06
TSPAN1-201ENST00000372003 PTCH1Q13635 1447 aa15.44■□□□□ 0.06
TSPAN1-201ENST00000372003 C19orf44Q9H6X5 657 aa15.42■□□□□ 0.06
TSPAN1-201ENST00000372003 MINK1Q8N4C8 1332 aaPredicted RBP15.42■□□□□ 0.06
TSPAN1-201ENST00000372003 FAM135BQ49AJ0 1406 aa15.42■□□□□ 0.06
TSPAN1-201ENST00000372003 CENPJQ9HC77 1338 aaPredicted RBP15.41■□□□□ 0.06
TSPAN1-201ENST00000372003 MSH6P52701 1360 aa15.41■□□□□ 0.06
TSPAN1-201ENST00000372003 SMG6Q86US8 1419 aaKnown RBP15.4■□□□□ 0.06
TSPAN1-201ENST00000372003 ATF3P18847 181 aa15.39■□□□□ 0.05
TSPAN1-201ENST00000372003 DLC1Q96QB1 1528 aa15.39■□□□□ 0.05
TSPAN1-201ENST00000372003 NCOA3Q9Y6Q9 1424 aa15.39■□□□□ 0.05
TSPAN1-201ENST00000372003 EIF3AQ14152 1382 aaKnown RBP15.39■□□□□ 0.05
TSPAN1-201ENST00000372003 ST20-MTHFSA0A0A6YYL1 179 aa15.39■□□□□ 0.05
TSPAN1-201ENST00000372003 NUTM2FA1L443 756 aa15.39■□□□□ 0.05
TSPAN1-201ENST00000372003 UBAP1LF5GYI3 381 aa15.39■□□□□ 0.05
TSPAN1-201ENST00000372003 USP47Q96K76 1375 aa15.38■□□□□ 0.05
TSPAN1-201ENST00000372003 MRS2Q9HD23 443 aa15.37■□□□□ 0.05
TSPAN1-201ENST00000372003 ADGRL3Q9HAR2 1447 aa15.37■□□□□ 0.05
TSPAN1-201ENST00000372003 RNF123Q5XPI4 1314 aa15.36■□□□□ 0.05
TSPAN1-201ENST00000372003 TOM1O60784 492 aa15.36■□□□□ 0.05
TSPAN1-201ENST00000372003 CADPS2Q86UW7 1296 aa15.36■□□□□ 0.05
TSPAN1-201ENST00000372003 KNDC1Q76NI1 1749 aa15.36■□□□□ 0.05
TSPAN1-201ENST00000372003 PIP4K2BP78356 416 aa15.35■□□□□ 0.05
TSPAN1-201ENST00000372003 IRX6P78412 446 aaPredicted RBP15.35■□□□□ 0.05
TSPAN1-201ENST00000372003 WASLO00401 505 aaPredicted RBP15.34■□□□□ 0.05
TSPAN1-201ENST00000372003 SLAIN2Q9P270 581 aa15.34■□□□□ 0.05
TSPAN1-201ENST00000372003 CDK19Q9BWU1 502 aa15.33■□□□□ 0.04
TSPAN1-201ENST00000372003 ARHGEF28Q8N1W1 1705 aaKnown RBP15.33■□□□□ 0.04
TSPAN1-201ENST00000372003 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.33■□□□□ 0.04
TSPAN1-201ENST00000372003 SRPK2P78362 688 aaKnown RBP15.32■□□□□ 0.04
TSPAN1-201ENST00000372003 CCDC184Q52MB2 194 aa15.32■□□□□ 0.04
TSPAN1-201ENST00000372003 IQSEC2Q5JU85 1478 aa15.32■□□□□ 0.04
TSPAN1-201ENST00000372003 CABP2Q9NPB3 220 aa15.32■□□□□ 0.04
TSPAN1-201ENST00000372003 XIRP1Q702N8 1843 aaKnown RBP15.32■□□□□ 0.04
TSPAN1-201ENST00000372003 KIF7Q2M1P5 1343 aa15.31■□□□□ 0.04
TSPAN1-201ENST00000372003 C11orf95C9JLR9 678 aaPredicted RBP15.31■□□□□ 0.04
TSPAN1-201ENST00000372003 TESK2Q96S53 571 aa15.31■□□□□ 0.04
TSPAN1-201ENST00000372003 FAM9BQ8IZU0 186 aa15.3■□□□□ 0.04
TSPAN1-201ENST00000372003 NOP58Q9Y2X3 529 aaKnown RBP15.3■□□□□ 0.04
TSPAN1-201ENST00000372003 NALCNQ8IZF0 1738 aa15.3■□□□□ 0.04
TSPAN1-201ENST00000372003 DCCP43146 1447 aa15.3■□□□□ 0.04
TSPAN1-201ENST00000372003 EVC2Q86UK5 1308 aa15.3■□□□□ 0.04
TSPAN1-201ENST00000372003 ESCO1Q5FWF5 840 aa15.29■□□□□ 0.04
TSPAN1-201ENST00000372003 ORAI2Q96SN7 254 aa15.29■□□□□ 0.04
TSPAN1-201ENST00000372003 NUDCQ9Y266 331 aa15.29■□□□□ 0.04
TSPAN1-201ENST00000372003 B4GALNT3Q6L9W6 998 aa15.28■□□□□ 0.04
TSPAN1-201ENST00000372003 MST1RQ04912 1400 aa15.28■□□□□ 0.04
TSPAN1-201ENST00000372003 TMF1P82094 1093 aa15.27■□□□□ 0.03
TSPAN1-201ENST00000372003 NUDT16Q96DE0 195 aaKnown RBP15.27■□□□□ 0.03
TSPAN1-201ENST00000372003 PRR36Q9H6K5 1346 aa15.27■□□□□ 0.03
TSPAN1-201ENST00000372003 KTN1Q86UP2 1357 aaKnown RBP15.26■□□□□ 0.03
TSPAN1-201ENST00000372003 POLR3GLQ9BT43 218 aa15.26■□□□□ 0.03
TSPAN1-201ENST00000372003 C1orf167Q5SNV9 1468 aa15.26■□□□□ 0.03
TSPAN1-201ENST00000372003 QRICH2Q9H0J4 1663 aa15.26■□□□□ 0.03
TSPAN1-201ENST00000372003 SBNO2Q9Y2G9 1366 aa15.26■□□□□ 0.03
TSPAN1-201ENST00000372003 CDC42BPGQ6DT37 1551 aa15.26■□□□□ 0.03
TSPAN1-201ENST00000372003 SLC24A1O60721 1099 aa15.25■□□□□ 0.03
TSPAN1-201ENST00000372003 BRINP3Q76B58 766 aa15.25■□□□□ 0.03
TSPAN1-201ENST00000372003 PMFBP1Q8TBY8 1022 aa15.25■□□□□ 0.03
TSPAN1-201ENST00000372003 FBXO41Q8TF61 875 aa15.25■□□□□ 0.03
TSPAN1-201ENST00000372003 ADGRB2O60241 1585 aa15.24■□□□□ 0.03
TSPAN1-201ENST00000372003 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
TSPAN1-201ENST00000372003 DDX17Q92841 729 aaKnown RBP15.24■□□□□ 0.03
TSPAN1-201ENST00000372003 CCDC61Q9Y6R9 512 aa15.24■□□□□ 0.03
TSPAN1-201ENST00000372003 DISP3Q9P2K9 1392 aa15.23■□□□□ 0.03
TSPAN1-201ENST00000372003 TULP4Q9NRJ4 1543 aa15.23■□□□□ 0.03
TSPAN1-201ENST00000372003 PHF8Q9UPP1 1060 aa15.23■□□□□ 0.03
TSPAN1-201ENST00000372003 FOXO3O43524 673 aa15.22■□□□□ 0.03
TSPAN1-201ENST00000372003 TMC1Q8TDI8 760 aa15.22■□□□□ 0.03
TSPAN1-201ENST00000372003 CABP1Q9NZU7 370 aa15.22■□□□□ 0.03
TSPAN1-201ENST00000372003 ANP32AP39687 249 aaKnown RBP15.21■□□□□ 0.03
TSPAN1-201ENST00000372003 XPCQ01831 940 aaPredicted RBP15.21■□□□□ 0.02
TSPAN1-201ENST00000372003 CDCA8Q53HL2 280 aa15.21■□□□□ 0.02
TSPAN1-201ENST00000372003 ANKARQ7Z5J8 1434 aa15.21■□□□□ 0.02
TSPAN1-201ENST00000372003 NGDNQ8NEJ9 315 aaKnown RBP15.21■□□□□ 0.02
TSPAN1-201ENST00000372003 IPO9Q96P70 1041 aaKnown RBP15.21■□□□□ 0.02
TSPAN1-201ENST00000372003 FMN2Q9NZ56 1722 aa15.19■□□□□ 0.02
TSPAN1-201ENST00000372003 ATP7BP35670 1465 aa15.19■□□□□ 0.02
TSPAN1-201ENST00000372003 CCDC136Q96JN2 1154 aa15.19■□□□□ 0.02
TSPAN1-201ENST00000372003 PPIP5K1Q6PFW1 1433 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms