RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 TECPR2O15040 1411 aa23.82■■□□□ 1.4
SSBP3-203ENST00000371319 ZNF142P52746 1687 aaPredicted RBP23.82■■□□□ 1.4
SSBP3-203ENST00000371319 TXNDC2Q86VQ3 553 aa23.82■■□□□ 1.4
SSBP3-203ENST00000371319 CARD14Q9BXL6 1004 aa23.82■■□□□ 1.4
SSBP3-203ENST00000371319 PLEKHH1Q9ULM0 1364 aa23.81■■□□□ 1.4
SSBP3-203ENST00000371319 NLRP13Q86W25 1043 aa23.81■■□□□ 1.4
SSBP3-203ENST00000371319 MINK1Q8N4C8 1332 aaPredicted RBP23.81■■□□□ 1.4
SSBP3-203ENST00000371319 THEMISQ8N1K5 641 aaPredicted RBP23.8■■□□□ 1.4
SSBP3-203ENST00000371319 SLC12A5Q9H2X9 1139 aa23.8■■□□□ 1.4
SSBP3-203ENST00000371319 TMC1Q8TDI8 760 aa23.79■■□□□ 1.4
SSBP3-203ENST00000371319 CABP2Q9NPB3 220 aa23.79■■□□□ 1.4
SSBP3-203ENST00000371319 EID1Q9Y6B2 187 aa23.79■■□□□ 1.4
SSBP3-203ENST00000371319 USP32Q8NFA0 1604 aa23.79■■□□□ 1.4
SSBP3-203ENST00000371319 PNISRQ8TF01 805 aaKnown RBP23.78■■□□□ 1.4
SSBP3-203ENST00000371319 HNRNPUQ00839 825 aaKnown RBP eCLIP23.78■■□□□ 1.43e-6■□□□□ 10.4
SSBP3-203ENST00000371319 WAPLQ7Z5K2 1190 aa23.78■■□□□ 1.4
SSBP3-203ENST00000371319 SIRT1Q96EB6 747 aa23.78■■□□□ 1.4
SSBP3-203ENST00000371319 BCANQ96GW7 911 aa23.78■■□□□ 1.4
SSBP3-203ENST00000371319 FAM135BQ49AJ0 1406 aa23.77■■□□□ 1.4
SSBP3-203ENST00000371319 NINLQ9Y2I6 1382 aa23.75■■□□□ 1.39
SSBP3-203ENST00000371319 NSD3Q9BZ95 1437 aa23.75■■□□□ 1.39
SSBP3-203ENST00000371319 DIP2AQ14689 1571 aa23.75■■□□□ 1.39
SSBP3-203ENST00000371319 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
SSBP3-203ENST00000371319 ANKRD36BQ8N2N9 1353 aa23.74■■□□□ 1.39
SSBP3-203ENST00000371319 SRPK2P78362 688 aaKnown RBP23.73■■□□□ 1.39
SSBP3-203ENST00000371319 GTF3C3Q9Y5Q9 886 aa23.73■■□□□ 1.39
SSBP3-203ENST00000371319 CDK19Q9BWU1 502 aa23.72■■□□□ 1.39
SSBP3-203ENST00000371319 PTPRUQ92729 1446 aa23.71■■□□□ 1.39
SSBP3-203ENST00000371319 SETD1BQ9UPS6 1966 aaKnown RBP23.71■■□□□ 1.39
SSBP3-203ENST00000371319 PPP2R1AP30153 589 aa23.7■■□□□ 1.38
SSBP3-203ENST00000371319 ROBO2Q9HCK4 1378 aa23.7■■□□□ 1.38
SSBP3-203ENST00000371319 TBX22Q9Y458 520 aa23.69■■□□□ 1.38
SSBP3-203ENST00000371319 CD163L1Q9NR16 1453 aa23.68■■□□□ 1.38
SSBP3-203ENST00000371319 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
SSBP3-203ENST00000371319 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.66■■□□□ 1.38
SSBP3-203ENST00000371319 ADGRB2O60241 1585 aa23.66■■□□□ 1.38
SSBP3-203ENST00000371319 A0A1W2PP64 1363 aa23.66■■□□□ 1.38
SSBP3-203ENST00000371319 XRN1Q8IZH2 1706 aaKnown RBP23.65■■□□□ 1.38
SSBP3-203ENST00000371319 ZBED9Q6R2W3 1325 aa23.64■■□□□ 1.38
SSBP3-203ENST00000371319 WASLO00401 505 aaPredicted RBP23.63■■□□□ 1.37
SSBP3-203ENST00000371319 PTCH1Q13635 1447 aa23.61■■□□□ 1.37
SSBP3-203ENST00000371319 CGNL1Q0VF96 1302 aa23.61■■□□□ 1.37
SSBP3-203ENST00000371319 INSRP06213 1382 aa23.61■■□□□ 1.37
SSBP3-203ENST00000371319 NSD2O96028 1365 aa23.6■■□□□ 1.37
SSBP3-203ENST00000371319 ATP7BP35670 1465 aa23.6■■□□□ 1.37
SSBP3-203ENST00000371319 TERF2IPQ9NYB0 399 aa23.59■■□□□ 1.37
SSBP3-203ENST00000371319 AMOTL2Q9Y2J4 779 aa23.59■■□□□ 1.37
SSBP3-203ENST00000371319 ANKRD26Q9UPS8 1709 aa23.59■■□□□ 1.37
SSBP3-203ENST00000371319 ANKLE2Q86XL3 938 aa23.58■■□□□ 1.37
SSBP3-203ENST00000371319 CABP1Q9NZU7 370 aa23.58■■□□□ 1.37
SSBP3-203ENST00000371319 PIK3R4Q99570 1358 aa23.57■■□□□ 1.36
SSBP3-203ENST00000371319 BLMP54132 1417 aaPredicted RBP23.57■■□□□ 1.36
SSBP3-203ENST00000371319 MORC1Q86VD1 984 aa23.56■■□□□ 1.36
SSBP3-203ENST00000371319 KIF20BQ96Q89 1820 aa23.56■■□□□ 1.36
SSBP3-203ENST00000371319 HDGFL2Q7Z4V5 671 aaPredicted RBP23.55■■□□□ 1.36
SSBP3-203ENST00000371319 TOPAZ1Q8N9V7 1692 aa23.55■■□□□ 1.36
SSBP3-203ENST00000371319 PPIP5K1Q6PFW1 1433 aa23.54■■□□□ 1.36
SSBP3-203ENST00000371319 CDC42BPGQ6DT37 1551 aa23.54■■□□□ 1.36
SSBP3-203ENST00000371319 CHD2O14647 1828 aaKnown RBP23.54■■□□□ 1.36
SSBP3-203ENST00000371319 NUDT16Q96DE0 195 aaKnown RBP23.53■■□□□ 1.36
SSBP3-203ENST00000371319 AKAP12Q02952 1782 aa23.53■■□□□ 1.36
SSBP3-203ENST00000371319 CPSF1Q10570 1443 aaKnown RBP23.52■■□□□ 1.36
SSBP3-203ENST00000371319 PRR36Q9H6K5 1346 aa23.52■■□□□ 1.36
SSBP3-203ENST00000371319 MON2Q7Z3U7 1717 aa23.51■■□□□ 1.35
SSBP3-203ENST00000371319 ITSN1Q15811 1721 aa23.51■■□□□ 1.35
SSBP3-203ENST00000371319 POLR3AO14802 1390 aaPredicted RBP23.5■■□□□ 1.35
SSBP3-203ENST00000371319 NPHP4O75161 1426 aaPredicted RBP23.49■■□□□ 1.35
SSBP3-203ENST00000371319 SHPRHQ149N8 1683 aa23.48■■□□□ 1.35
SSBP3-203ENST00000371319 FYB1O15117 783 aa23.48■■□□□ 1.35
SSBP3-203ENST00000371319 ADAMTS8Q9UP79 889 aa23.48■■□□□ 1.35
SSBP3-203ENST00000371319 CCDC61Q9Y6R9 512 aa23.48■■□□□ 1.35
SSBP3-203ENST00000371319 NCKAP5LQ9HCH0 1330 aa23.47■■□□□ 1.35
SSBP3-203ENST00000371319 KCNA6P17658 529 aa23.47■■□□□ 1.35
SSBP3-203ENST00000371319 WDR43Q15061 677 aaKnown RBP eCLIP23.46■■□□□ 1.35
SSBP3-203ENST00000371319 EDC4Q6P2E9 1401 aaKnown RBP23.45■■□□□ 1.35
SSBP3-203ENST00000371319 TNNT2P45379 298 aaPredicted RBP23.45■■□□□ 1.34
SSBP3-203ENST00000371319 GGNBP2Q9H3C7 697 aa23.45■■□□□ 1.34
SSBP3-203ENST00000371319 SENP3-EIF4A1A0A087X0R7 540 aa23.44■■□□□ 1.34
SSBP3-203ENST00000371319 SMG6Q86US8 1419 aaKnown RBP23.42■■□□□ 1.34
SSBP3-203ENST00000371319 NRKQ7Z2Y5 1582 aa23.41■■□□□ 1.34
SSBP3-203ENST00000371319 NKTRP30414 1462 aaKnown RBP23.41■■□□□ 1.34
SSBP3-203ENST00000371319 FMN2Q9NZ56 1722 aa23.41■■□□□ 1.34
SSBP3-203ENST00000371319 MTHFSP49914 203 aa23.4■■□□□ 1.34
SSBP3-203ENST00000371319 NALCNQ8IZF0 1738 aa23.4■■□□□ 1.34
SSBP3-203ENST00000371319 RGPD8O14715 1765 aaPredicted RBP23.4■■□□□ 1.34
SSBP3-203ENST00000371319 PLEKHG3A1L390 1219 aa23.4■■□□□ 1.34
SSBP3-203ENST00000371319 NWD1Q149M9 1564 aa23.39■■□□□ 1.33
SSBP3-203ENST00000371319 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.39■■□□□ 1.33
SSBP3-203ENST00000371319 ZNF692Q9BU19 519 aaPredicted RBP23.37■■□□□ 1.33
SSBP3-203ENST00000371319 NUTM2FA1L443 756 aa23.35■■□□□ 1.33
SSBP3-203ENST00000371319 ANKARQ7Z5J8 1434 aa23.35■■□□□ 1.33
SSBP3-203ENST00000371319 COL3A1P02461 1466 aaPredicted RBP23.35■■□□□ 1.33
SSBP3-203ENST00000371319 NUDCQ9Y266 331 aa23.35■■□□□ 1.33
SSBP3-203ENST00000371319 ACEP12821 1306 aa23.35■■□□□ 1.33
SSBP3-203ENST00000371319 CFAP53Q96M91 514 aa23.34■■□□□ 1.33
SSBP3-203ENST00000371319 NME9Q86XW9 330 aa23.33■■□□□ 1.33
SSBP3-203ENST00000371319 KDM4FA0A1W2PPD8 638 aa23.32■■□□□ 1.32
SSBP3-203ENST00000371319 SALL2Q9Y467 1007 aaPredicted RBP23.32■■□□□ 1.32
SSBP3-203ENST00000371319 SUPT16HQ9Y5B9 1047 aaKnown RBP23.32■■□□□ 1.32
SSBP3-203ENST00000371319 USP6P35125 1406 aa23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms