RNA–Protein interactions for RNA: ENST00000371123.5

SMARCA1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-203ENST00000371123 TROQ12816 1431 aaPredicted RBP11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 FAM135AQ9P2D6 1515 aa11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 NCLP19338 710 aaKnown RBP11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 TSC1Q92574 1164 aa11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 PDZRN3Q9UPQ7 1066 aa11.06□□□□□ -0.64
SMARCA1-203ENST00000371123 ELL2O00472 640 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 BECN1Q14457 450 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 KIF2CQ99661 725 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 RICTORQ6R327 1708 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 NKTRP30414 1462 aaKnown RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 AEBP2Q6ZN18 517 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 TAOK2Q9UL54 1235 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 FRMPD1Q5SYB0 1578 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 XPCQ01831 940 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 GOLGA2Q08379 1002 aa11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 BCL11BQ9C0K0 894 aaPredicted RBP11.05□□□□□ -0.64
SMARCA1-203ENST00000371123 PPP2R1AP30153 589 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 STAC3Q96MF2 364 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 R3HCC1Q9Y3T6 440 aaKnown RBP11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 PRDM15P57071 1507 aaPredicted RBP11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 PRAG1Q86YV5 1406 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 ZNF710Q8N1W2 664 aa11.04□□□□□ -0.64
SMARCA1-203ENST00000371123 CHMP5Q9NZZ3 219 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 UPF2Q9HAU5 1272 aaKnown RBP11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 STAG3Q9UJ98 1225 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 MYOM1P52179 1685 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 SMAP1Q8IYB5 467 aaPredicted RBP11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 APAF1O14727 1248 aa11.03□□□□□ -0.64
SMARCA1-203ENST00000371123 NUTM2FA1L443 756 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 DMTNQ08495 405 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 ZSCAN30Q86W11 494 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 NEO1Q92859 1461 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 MAST1Q9Y2H9 1570 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 REREQ9P2R6 1566 aa11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 AMER1Q5JTC6 1135 aaPredicted RBP11.02□□□□□ -0.65
SMARCA1-203ENST00000371123 ARHGEF5Q12774 1597 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 GGT6Q6P531 493 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 CHAMP1Q96JM3 812 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 PDE4CQ08493 712 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 PLXNC1O60486 1568 aa11.01□□□□□ -0.65
SMARCA1-203ENST00000371123 UQCRHLA0A096LP55 91 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 UQCRHP07919 91 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 MAPK8IP3Q9UPT6 1336 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 ZBTB22O15209 634 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 C22orf23Q9BZE7 217 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 TMEM51Q9NW97 253 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 ADGRL2O95490 1459 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 PLA2R1Q13018 1463 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 RAB3GAP1Q15042 981 aa11□□□□□ -0.65
SMARCA1-203ENST00000371123 FTSJ3Q8IY81 847 aaKnown RBP11□□□□□ -0.65
SMARCA1-203ENST00000371123 ABCC1P33527 1531 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 MFAP1P55081 439 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 ATP2B3Q16720 1220 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L5Q5VV16 416 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L4Q8WXT5 416 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 RBSNQ9H1K0 784 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FAM177BA6PVY3 158 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 SAMD9LQ8IVG5 1584 aa10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L6Q3SYB3 417 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 FOXD4L3Q6VB84 417 aaPredicted RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
SMARCA1-203ENST00000371123 A2MP01023 1474 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 MLECQ14165 292 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 TRAK1Q9UPV9 953 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 GPRASP1Q5JY77 1395 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 PDLIM2Q96JY6 352 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 SHPRHQ149N8 1683 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 ERBINQ96RT1 1412 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 ZNF500O60304 480 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 SSFA2P28290 1259 aa10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 BBXQ8WY36 941 aaPredicted RBP10.98□□□□□ -0.65
SMARCA1-203ENST00000371123 PLCH2O75038 1416 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 TERF1P54274 439 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 ZNF428Q96B54 188 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 INO80Q9ULG1 1556 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 NASPP49321 788 aaPredicted RBP10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 TMF1P82094 1093 aa10.97□□□□□ -0.65
SMARCA1-203ENST00000371123 LAMC1P11047 1609 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 TRIM44Q96DX7 344 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 NOL7Q9UMY1 257 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 GPATCH8Q9UKJ3 1502 aaKnown RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 U2AF1L5P0DN76 240 aaPredicted RBP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 U2AF1Q01081 240 aaKnown RBP eCLIP10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 CCDC173Q0VFZ6 552 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 PKP1Q13835 747 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 SMC5Q8IY18 1101 aa10.96□□□□□ -0.65
SMARCA1-203ENST00000371123 ARHGAP31Q2M1Z3 1444 aa10.96□□□□□ -0.66
SMARCA1-203ENST00000371123 PDE3AQ14432 1141 aa10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 NOL8Q76FK4 1167 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 CHMP4BQ9H444 224 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 NSFL1CQ9UNZ2 370 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 UTP14CQ5TAP6 766 aaKnown RBP10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 DDX11L8A8MPP1 907 aa10.95□□□□□ -0.66
SMARCA1-203ENST00000371123 ZNF830Q96NB3 372 aaPredicted RBP10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 RARSP54136 660 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 GAS2L2Q8NHY3 880 aa10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 ANKRD50Q9ULJ7 1429 aa10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 RNF17Q9BXT8 1623 aaKnown RBP10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 CGNL1Q0VF96 1302 aa10.94□□□□□ -0.66
SMARCA1-203ENST00000371123 ZMYM3Q14202 1370 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms