RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ZFP91Q96JP5 570 aaPredicted RBP10.32□□□□□ -0.76
LCA5-201ENST00000369846 NAP1L1P55209 391 aaKnown RBP10.32□□□□□ -0.76
LCA5-201ENST00000369846 ZKSCAN2Q63HK3 967 aa10.32□□□□□ -0.76
LCA5-201ENST00000369846 SDF4Q9BRK5 362 aa10.32□□□□□ -0.76
LCA5-201ENST00000369846 CCDC102AQ96A19 550 aa10.32□□□□□ -0.76
LCA5-201ENST00000369846 CARMIL1Q5VZK9 1371 aa10.32□□□□□ -0.76
LCA5-201ENST00000369846 DNAJC2Q99543 621 aaKnown RBP10.31□□□□□ -0.76
LCA5-201ENST00000369846 TOMM22Q9NS69 142 aa10.31□□□□□ -0.76
LCA5-201ENST00000369846 RTF1Q92541 710 aaKnown RBP10.31□□□□□ -0.76
LCA5-201ENST00000369846 UBXN4Q92575 508 aa10.31□□□□□ -0.76
LCA5-201ENST00000369846 FIBPO43427 364 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 CCDC27Q2M243 656 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 L3MBTL2Q969R5 705 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 PCF11O94913 1555 aaKnown RBP10.3□□□□□ -0.76
LCA5-201ENST00000369846 EIF3JO75822 258 aaKnown RBP10.3□□□□□ -0.76
LCA5-201ENST00000369846 SMC2O95347 1197 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 ANKRD20A12PQ8NF67 263 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 GPATCH3Q96I76 525 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 CFDP1Q9UEE9 299 aaPredicted RBP10.3□□□□□ -0.76
LCA5-201ENST00000369846 SAFB2Q14151 953 aaKnown RBP eCLIP10.3□□□□□ -0.76
LCA5-201ENST00000369846 CLCN1P35523 988 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 MNAT1P51948 309 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 TMCO3Q6UWJ1 677 aa10.3□□□□□ -0.76
LCA5-201ENST00000369846 FAM193AP78312 1265 aa10.29□□□□□ -0.76
LCA5-201ENST00000369846 FOSBP53539 338 aa10.29□□□□□ -0.76
LCA5-201ENST00000369846 STK31Q9BXU1 1019 aa10.29□□□□□ -0.76
LCA5-201ENST00000369846 MYBBP1AQ9BQG0 1328 aaKnown RBP10.29□□□□□ -0.76
LCA5-201ENST00000369846 GOLGA6L7A0A1B0GV03 622 aa10.28□□□□□ -0.76
LCA5-201ENST00000369846 FILIP1Q7Z7B0 1213 aa10.28□□□□□ -0.76
LCA5-201ENST00000369846 APAF1O14727 1248 aa10.28□□□□□ -0.76
LCA5-201ENST00000369846 ERLIN1O75477 346 aa10.28□□□□□ -0.76
LCA5-201ENST00000369846 ZKSCAN1P17029 563 aaPredicted RBP10.28□□□□□ -0.76
LCA5-201ENST00000369846 NBPF8Q3BBV2 869 aa10.28□□□□□ -0.76
LCA5-201ENST00000369846 DYNC1I1O14576 645 aa10.27□□□□□ -0.76
LCA5-201ENST00000369846 SRPK2P78362 688 aaKnown RBP10.27□□□□□ -0.76
LCA5-201ENST00000369846 LETM1O95202 739 aaPredicted RBP10.27□□□□□ -0.77
LCA5-201ENST00000369846 PANK1Q8TE04 598 aa10.27□□□□□ -0.77
LCA5-201ENST00000369846 KDM5BQ9UGL1 1544 aa10.27□□□□□ -0.77
LCA5-201ENST00000369846 NAT10Q9H0A0 1025 aaKnown RBP10.27□□□□□ -0.77
LCA5-201ENST00000369846 NEFHP12036 1026 aa10.26□□□□□ -0.77
LCA5-201ENST00000369846 CT47A1Q5JQC4 288 aaPredicted RBP10.26□□□□□ -0.77
LCA5-201ENST00000369846 LMOD2Q6P5Q4 547 aa10.26□□□□□ -0.77
LCA5-201ENST00000369846 INCENPQ9NQS7 918 aa10.26□□□□□ -0.77
LCA5-201ENST00000369846 TRIM34Q9BYJ4 488 aa10.26□□□□□ -0.77
LCA5-201ENST00000369846 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.26□□□□□ -0.77
LCA5-201ENST00000369846 NEK4P51957 841 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 FGD6Q6ZV73 1430 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 SYCE3A1L190 88 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 FHAD1B1AJZ9 1412 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 INTS3Q68E01 1043 aaKnown RBP10.25□□□□□ -0.77
LCA5-201ENST00000369846 CNTLNQ9NXG0 1405 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 DDX19BQ9UMR2 479 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 UACAQ9BZF9 1416 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 DZIP1LQ8IYY4 767 aaKnown RBP10.25□□□□□ -0.77
LCA5-201ENST00000369846 DNAAF4Q8WXU2 420 aa10.25□□□□□ -0.77
LCA5-201ENST00000369846 CCDC9Q9Y3X0 531 aaKnown RBP10.25□□□□□ -0.77
LCA5-201ENST00000369846 CCDC192P0DO97 292 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 PKD2Q13563 968 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 LRRCC1Q9C099 1032 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 NAIPQ13075 1403 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 CCP110O43303 1012 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 CCDC7Q96M83 1385 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 KIF7Q2M1P5 1343 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 TDO2P48775 406 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 CYB5RLQ6IPT4 315 aa10.24□□□□□ -0.77
LCA5-201ENST00000369846 NOL10Q9BSC4 688 aaKnown RBP10.24□□□□□ -0.77
LCA5-201ENST00000369846 PANK2Q9BZ23 570 aa10.23□□□□□ -0.77
LCA5-201ENST00000369846 CPLX1O14810 134 aa10.23□□□□□ -0.77
LCA5-201ENST00000369846 MARCH6O60337 910 aa10.23□□□□□ -0.77
LCA5-201ENST00000369846 KINO60870 393 aaKnown RBP10.23□□□□□ -0.77
LCA5-201ENST00000369846 LMAN1P49257 510 aa10.23□□□□□ -0.77
LCA5-201ENST00000369846 CDCA7LQ96GN5 454 aa10.23□□□□□ -0.77
LCA5-201ENST00000369846 GOLGA6L10A6NI86 522 aa10.23□□□□□ -0.77
LCA5-201ENST00000369846 BRPF1P55201 1214 aaPredicted RBP10.23□□□□□ -0.77
LCA5-201ENST00000369846 CPLX2Q6PUV4 134 aaKnown RBP10.23□□□□□ -0.77
LCA5-201ENST00000369846 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 TAX1BP1Q86VP1 789 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 C16orf45Q96MC5 204 aaPredicted RBP10.22□□□□□ -0.77
LCA5-201ENST00000369846 HOOK1Q9UJC3 728 aaKnown RBP10.22□□□□□ -0.77
LCA5-201ENST00000369846 MPHOSPH9Q99550 1183 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 KIF15Q9NS87 1388 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 SHTN1A0MZ66 631 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 ODF2Q5BJF6 829 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 RNF20Q5VTR2 975 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 OLFM4Q6UX06 510 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 PDZRN3Q9UPQ7 1066 aa10.22□□□□□ -0.77
LCA5-201ENST00000369846 ROCK2O75116 1388 aaKnown RBP10.22□□□□□ -0.77
LCA5-201ENST00000369846 GTPBP4Q9BZE4 634 aaKnown RBP10.21□□□□□ -0.77
LCA5-201ENST00000369846 SYNE3Q6ZMZ3 975 aa10.21□□□□□ -0.77
LCA5-201ENST00000369846 ST20-MTHFSA0A0A6YYL1 179 aa10.21□□□□□ -0.78
LCA5-201ENST00000369846 CDC45O75419 566 aa10.21□□□□□ -0.78
LCA5-201ENST00000369846 XRCC6P12956 609 aaKnown RBP eCLIP10.21□□□□□ -0.78
LCA5-201ENST00000369846 HFM1A2PYH4 1435 aa10.21□□□□□ -0.78
LCA5-201ENST00000369846 RNF187Q5TA31 235 aaPredicted RBP10.21□□□□□ -0.78
LCA5-201ENST00000369846 RUFY2Q8WXA3 655 aa10.21□□□□□ -0.78
LCA5-201ENST00000369846 OFD1O75665 1012 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 LMOD3Q0VAK6 560 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 KIF18AQ8NI77 898 aa10.2□□□□□ -0.78
LCA5-201ENST00000369846 CRACR2AQ9BSW2 395 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms