RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 SLC4A10Q6U841 1118 aa15.06■□□□□ 0
RAP1A-202ENST00000369709 NCAPD3P42695 1498 aa15.06■□□□□ 0
RAP1A-202ENST00000369709 RBM42Q9BTD8 480 aaKnown RBP15.06■□□□□ 0
RAP1A-202ENST00000369709 PRIM1P49642 420 aaKnown RBP15.06■□□□□ 0
RAP1A-202ENST00000369709 NEK4P51957 841 aa15.06■□□□□ 0
RAP1A-202ENST00000369709 OS9Q13438 667 aaPredicted RBP15.06■□□□□ 0
RAP1A-202ENST00000369709 TRAK1Q9UPV9 953 aa15.06■□□□□ 0
RAP1A-202ENST00000369709 PLCD3Q8N3E9 789 aa15.06■□□□□ 0
RAP1A-202ENST00000369709 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
RAP1A-202ENST00000369709 ZKSCAN5Q9Y2L8 839 aa15.06■□□□□ 0
RAP1A-202ENST00000369709 RIPK4P57078 832 aa15.05■□□□□ 0
RAP1A-202ENST00000369709 TPD52L1Q16890 204 aaPredicted RBP15.05■□□□□ 0
RAP1A-202ENST00000369709 CADPSQ9ULU8 1353 aa15.05■□□□□ -0
RAP1A-202ENST00000369709 EFCAB5A4FU69 1503 aa15.05■□□□□ -0
RAP1A-202ENST00000369709 ANO2Q9NQ90 1003 aa15.04■□□□□ -0
RAP1A-202ENST00000369709 STAG3Q9UJ98 1225 aa15.04■□□□□ -0
RAP1A-202ENST00000369709 PARD3Q8TEW0 1356 aa15.04■□□□□ -0
RAP1A-202ENST00000369709 AEBP1Q8IUX7 1158 aa15.04■□□□□ -0
RAP1A-202ENST00000369709 TSC1Q92574 1164 aa15.04■□□□□ -0
RAP1A-202ENST00000369709 USP25Q9UHP3 1055 aa15.04■□□□□ -0
RAP1A-202ENST00000369709 VGLL3A8MV65 326 aa15.04■□□□□ -0
RAP1A-202ENST00000369709 FGD1P98174 961 aa15.03■□□□□ -0
RAP1A-202ENST00000369709 RAB3GAP1Q15042 981 aa15.03■□□□□ -0
RAP1A-202ENST00000369709 DISP3Q9P2K9 1392 aa15.03■□□□□ -0
RAP1A-202ENST00000369709 MTHFSP49914 203 aa15.03■□□□□ -0
RAP1A-202ENST00000369709 TMEM57Q8N5G2 664 aa15.03■□□□□ -0
RAP1A-202ENST00000369709 STK26Q9P289 416 aa15.03■□□□□ -0
RAP1A-202ENST00000369709 CHMP4AQ9BY43 222 aa15.02■□□□□ -0
RAP1A-202ENST00000369709 RLBP1P12271 317 aa15.02□□□□□ -0.01
RAP1A-202ENST00000369709 CWC22Q9HCG8 908 aaKnown RBP15.02□□□□□ -0.01
RAP1A-202ENST00000369709 ATF7IPQ6VMQ6 1270 aa15.02□□□□□ -0.01
RAP1A-202ENST00000369709 FIBPO43427 364 aa15.01□□□□□ -0.01
RAP1A-202ENST00000369709 RBSNQ9H1K0 784 aa15.01□□□□□ -0.01
RAP1A-202ENST00000369709 ANTXR1Q9H6X2 564 aa15.01□□□□□ -0.01
RAP1A-202ENST00000369709 HTATSF1O43719 755 aaKnown RBP15.01□□□□□ -0.01
RAP1A-202ENST00000369709 TAF3Q5VWG9 929 aa15.01□□□□□ -0.01
RAP1A-202ENST00000369709 NUTM2DQ5VT03 806 aaPredicted RBP15□□□□□ -0.01
RAP1A-202ENST00000369709 GAS2L2Q8NHY3 880 aa15□□□□□ -0.01
RAP1A-202ENST00000369709 FBXW7Q969H0 707 aa15□□□□□ -0.01
RAP1A-202ENST00000369709 MCM5P33992 734 aa15□□□□□ -0.01
RAP1A-202ENST00000369709 GDPD2Q9HCC8 539 aa15□□□□□ -0.01
RAP1A-202ENST00000369709 NOL7Q9UMY1 257 aaKnown RBP15□□□□□ -0.01
RAP1A-202ENST00000369709 GOLGA6L19H0YKK7 550 aa15□□□□□ -0.01
RAP1A-202ENST00000369709 VPS37CA5D8V6 355 aaPredicted RBP15□□□□□ -0.01
RAP1A-202ENST00000369709 LETM1O95202 739 aaPredicted RBP14.99□□□□□ -0.01
RAP1A-202ENST00000369709 GNL2Q13823 731 aaKnown RBP14.99□□□□□ -0.01
RAP1A-202ENST00000369709 TEX35Q5T0J7 233 aa14.99□□□□□ -0.01
RAP1A-202ENST00000369709 CCDC112Q8NEF3 446 aa14.99□□□□□ -0.01
RAP1A-202ENST00000369709 TRIM5Q9C035 493 aa14.99□□□□□ -0.01
RAP1A-202ENST00000369709 HMMRO75330 724 aa14.98□□□□□ -0.01
RAP1A-202ENST00000369709 CCAR2Q8N163 923 aaKnown RBP14.98□□□□□ -0.01
RAP1A-202ENST00000369709 ATP6V1DQ9Y5K8 247 aa14.98□□□□□ -0.01
RAP1A-202ENST00000369709 CDK13Q14004 1512 aaKnown RBP14.98□□□□□ -0.01
RAP1A-202ENST00000369709 TBC1D9Q6ZT07 1266 aa14.98□□□□□ -0.01
RAP1A-202ENST00000369709 GTPBP4Q9BZE4 634 aaKnown RBP14.98□□□□□ -0.01
RAP1A-202ENST00000369709 TTC12Q9H892 705 aaPredicted RBP14.98□□□□□ -0.01
RAP1A-202ENST00000369709 NOLC1Q14978 699 aaKnown RBP eCLIP14.98□□□□□ -0.01
RAP1A-202ENST00000369709 LRSAM1Q6UWE0 723 aa14.98□□□□□ -0.01
RAP1A-202ENST00000369709 SMC5Q8IY18 1101 aa14.98□□□□□ -0.01
RAP1A-202ENST00000369709 ABCC5O15440 1437 aa14.97□□□□□ -0.01
RAP1A-202ENST00000369709 WDR63Q8IWG1 891 aa14.97□□□□□ -0.01
RAP1A-202ENST00000369709 C17orf53Q8N3J3 647 aaPredicted RBP14.97□□□□□ -0.01
RAP1A-202ENST00000369709 GCC1Q96CN9 775 aa14.97□□□□□ -0.01
RAP1A-202ENST00000369709 BECN2A8MW95 431 aa14.97□□□□□ -0.01
RAP1A-202ENST00000369709 ADCY5O95622 1261 aa14.97□□□□□ -0.01
RAP1A-202ENST00000369709 GORABQ5T7V8 394 aa14.96□□□□□ -0.01
RAP1A-202ENST00000369709 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.96□□□□□ -0.01
RAP1A-202ENST00000369709 SOX12O15370 315 aa14.96□□□□□ -0.01
RAP1A-202ENST00000369709 PRIMPOLQ96LW4 560 aa14.96□□□□□ -0.01
RAP1A-202ENST00000369709 ROCK1Q13464 1354 aa14.96□□□□□ -0.02
RAP1A-202ENST00000369709 SMC3Q9UQE7 1217 aa14.95□□□□□ -0.02
RAP1A-202ENST00000369709 TPM3P06753 285 aa14.95□□□□□ -0.02
RAP1A-202ENST00000369709 TRIM27P14373 513 aa14.95□□□□□ -0.02
RAP1A-202ENST00000369709 SSH1Q8WYL5 1049 aa14.95□□□□□ -0.02
RAP1A-202ENST00000369709 SNX21Q969T3 373 aa14.95□□□□□ -0.02
RAP1A-202ENST00000369709 BIVM-ERCC5R4GMW8 1640 aa14.94□□□□□ -0.02
RAP1A-202ENST00000369709 SPATA31E1Q6ZUB1 1445 aa14.94□□□□□ -0.02
RAP1A-202ENST00000369709 USP19O94966 1318 aa14.94□□□□□ -0.02
RAP1A-202ENST00000369709 HS1BP3Q53T59 392 aa14.94□□□□□ -0.02
RAP1A-202ENST00000369709 HOMER1Q86YM7 354 aa14.94□□□□□ -0.02
RAP1A-202ENST00000369709 C16orf45Q96MC5 204 aaPredicted RBP14.94□□□□□ -0.02
RAP1A-202ENST00000369709 DMRT2Q9Y5R5 561 aa14.94□□□□□ -0.02
RAP1A-202ENST00000369709 HSP90B1P14625 803 aaKnown RBP14.94□□□□□ -0.02
RAP1A-202ENST00000369709 FANCD2Q9BXW9 1451 aa14.94□□□□□ -0.02
RAP1A-202ENST00000369709 PER1O15534 1290 aaPredicted RBP14.93□□□□□ -0.02
RAP1A-202ENST00000369709 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.93□□□□□ -0.021e-6■■■□□ 16.6
RAP1A-202ENST00000369709 BICD2Q8TD16 824 aa14.93□□□□□ -0.02
RAP1A-202ENST00000369709 CFAP43Q8NDM7 1665 aa14.93□□□□□ -0.02
RAP1A-202ENST00000369709 U2AF2P26368 475 aaKnown RBP eCLIP14.92□□□□□ -0.021e-14■■■■■ 34.9
RAP1A-202ENST00000369709 ZMYM4Q5VZL5 1548 aa14.92□□□□□ -0.02
RAP1A-202ENST00000369709 TEX14Q8IWB6 1497 aa14.92□□□□□ -0.02
RAP1A-202ENST00000369709 PRDM2Q13029 1718 aa14.92□□□□□ -0.02
RAP1A-202ENST00000369709 TERF1P54274 439 aa14.91□□□□□ -0.02
RAP1A-202ENST00000369709 PPP1R9BQ96SB3 815 aa14.91□□□□□ -0.02
RAP1A-202ENST00000369709 RALGAPBQ86X10 1494 aa14.91□□□□□ -0.02
RAP1A-202ENST00000369709 DMTNQ08495 405 aa14.9□□□□□ -0.02
RAP1A-202ENST00000369709 HMOX1P09601 288 aa14.9□□□□□ -0.02
RAP1A-202ENST00000369709 FAM184AQ8NB25 1140 aa14.9□□□□□ -0.02
RAP1A-202ENST00000369709 HCLS1P14317 486 aaPredicted RBP14.9□□□□□ -0.02
RAP1A-202ENST00000369709 GPS2Q13227 327 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms