RNA–Protein interactions for RNA: ENST00000369622.7

SYNCRIP-202, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SYNCRIP, Length 3,023 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-202ENST00000369622 CGNL1Q0VF96 1302 aa20.32■□□□□ 0.84
SYNCRIP-202ENST00000369622 SYNMO15061 1565 aa20.32■□□□□ 0.84
SYNCRIP-202ENST00000369622 GOLGA6L3A6NEY3 463 aa20.32■□□□□ 0.84
SYNCRIP-202ENST00000369622 TRPM2O94759 1503 aa20.32■□□□□ 0.84
SYNCRIP-202ENST00000369622 PTPRTO14522 1441 aa20.31■□□□□ 0.84
SYNCRIP-202ENST00000369622 PRDM4Q9UKN5 801 aa20.31■□□□□ 0.84
SYNCRIP-202ENST00000369622 U2AF1L5P0DN76 240 aaPredicted RBP20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 U2AF1Q01081 240 aaKnown RBP eCLIP20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 PDE3AQ14432 1141 aa20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 ERVK-7P63135 1459 aa20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 NSD3Q9BZ95 1437 aa20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 NPC1L1Q9UHC9 1359 aa20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 IQGAP1P46940 1657 aa20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 ZCCHC11Q5TAX3 1644 aaKnown RBP20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 RUNDC1Q96C34 613 aa20.29■□□□□ 0.84
SYNCRIP-202ENST00000369622 ERBB4Q15303 1308 aa20.28■□□□□ 0.84
SYNCRIP-202ENST00000369622 FANCAO15360 1455 aa20.28■□□□□ 0.84
SYNCRIP-202ENST00000369622 BCL11BQ9C0K0 894 aaPredicted RBP20.27■□□□□ 0.84
SYNCRIP-202ENST00000369622 RLBP1P12271 317 aa20.27■□□□□ 0.84
SYNCRIP-202ENST00000369622 RARSP54136 660 aaKnown RBP20.27■□□□□ 0.83
SYNCRIP-202ENST00000369622 RTEL1-TNFRSF6BF6WH68 1400 aa20.26■□□□□ 0.83
SYNCRIP-202ENST00000369622 NOS1P29475 1434 aa20.26■□□□□ 0.83
SYNCRIP-202ENST00000369622 ZHX1Q9UKY1 873 aaPredicted RBP20.26■□□□□ 0.83
SYNCRIP-202ENST00000369622 CFAP53Q96M91 514 aa20.26■□□□□ 0.83
SYNCRIP-202ENST00000369622 U2SURPO15042 1029 aaKnown RBP20.25■□□□□ 0.83
SYNCRIP-202ENST00000369622 AEBP2Q6ZN18 517 aaPredicted RBP20.25■□□□□ 0.83
SYNCRIP-202ENST00000369622 ZFYVE16Q7Z3T8 1539 aa20.25■□□□□ 0.83
SYNCRIP-202ENST00000369622 STK26Q9P289 416 aa20.25■□□□□ 0.83
SYNCRIP-202ENST00000369622 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
SYNCRIP-202ENST00000369622 SPHKAPQ2M3C7 1700 aa20.24■□□□□ 0.83
SYNCRIP-202ENST00000369622 PRDM10Q9NQV6 1147 aa20.24■□□□□ 0.83
SYNCRIP-202ENST00000369622 KDM5AP29375 1690 aaKnown RBP20.23■□□□□ 0.83
SYNCRIP-202ENST00000369622 ADGRL1O94910 1474 aa20.23■□□□□ 0.83
SYNCRIP-202ENST00000369622 PDCL3Q9H2J4 239 aa20.23■□□□□ 0.83
SYNCRIP-202ENST00000369622 CABP2Q9NPB3 220 aa20.23■□□□□ 0.83
SYNCRIP-202ENST00000369622 ESPNB1AK53 854 aa20.22■□□□□ 0.83
SYNCRIP-202ENST00000369622 CFAP65Q6ZU64 1925 aaKnown RBP20.22■□□□□ 0.83
SYNCRIP-202ENST00000369622 SHROOM2Q13796 1616 aa20.22■□□□□ 0.83
SYNCRIP-202ENST00000369622 FTSJ3Q8IY81 847 aaKnown RBP20.21■□□□□ 0.83
SYNCRIP-202ENST00000369622 TSR2Q969E8 191 aaKnown RBP20.21■□□□□ 0.83
SYNCRIP-202ENST00000369622 UPF2Q9HAU5 1272 aaKnown RBP20.21■□□□□ 0.83
SYNCRIP-202ENST00000369622 MAPK8IP3Q9UPT6 1336 aa20.21■□□□□ 0.83
SYNCRIP-202ENST00000369622 NGEFQ8N5V2 710 aa20.21■□□□□ 0.83
SYNCRIP-202ENST00000369622 ATP7AQ04656 1500 aa20.21■□□□□ 0.83
SYNCRIP-202ENST00000369622 POLR3AO14802 1390 aaPredicted RBP20.21■□□□□ 0.83
SYNCRIP-202ENST00000369622 FAM13BQ9NYF5 915 aa20.2■□□□□ 0.82
SYNCRIP-202ENST00000369622 PDZRN3Q9UPQ7 1066 aa20.2■□□□□ 0.82
SYNCRIP-202ENST00000369622 BECN1Q14457 450 aa20.2■□□□□ 0.82
SYNCRIP-202ENST00000369622 PMFBP1Q8TBY8 1022 aa20.2■□□□□ 0.82
SYNCRIP-202ENST00000369622 MYOM1P52179 1685 aa20.2■□□□□ 0.82
SYNCRIP-202ENST00000369622 CEP152O94986 1710 aa20.19■□□□□ 0.82
SYNCRIP-202ENST00000369622 CALD1Q05682 793 aaKnown RBP20.19■□□□□ 0.82
SYNCRIP-202ENST00000369622 KIAA1211Q6ZU35 1233 aa20.19■□□□□ 0.82
SYNCRIP-202ENST00000369622 USP19O94966 1318 aa20.18■□□□□ 0.82
SYNCRIP-202ENST00000369622 MYH16Q9H6N6 1097 aa20.17■□□□□ 0.82
SYNCRIP-202ENST00000369622 SRPK2P78362 688 aaKnown RBP20.17■□□□□ 0.82
SYNCRIP-202ENST00000369622 C14orf93Q9H972 538 aaKnown RBP20.17■□□□□ 0.82
SYNCRIP-202ENST00000369622 CLASP1Q7Z460 1538 aa20.17■□□□□ 0.82
SYNCRIP-202ENST00000369622 GGNBP2Q9H3C7 697 aa20.16■□□□□ 0.82
SYNCRIP-202ENST00000369622 TRIM44Q96DX7 344 aaPredicted RBP20.16■□□□□ 0.82
SYNCRIP-202ENST00000369622 TET3O43151 1660 aa20.16■□□□□ 0.82
SYNCRIP-202ENST00000369622 RWDD1Q9H446 243 aaPredicted RBP20.16■□□□□ 0.82
SYNCRIP-202ENST00000369622 NPM1P06748 294 aaKnown RBP eCLIP20.15■□□□□ 0.82
SYNCRIP-202ENST00000369622 SMC4Q9NTJ3 1288 aa20.15■□□□□ 0.82
SYNCRIP-202ENST00000369622 WDR63Q8IWG1 891 aa20.15■□□□□ 0.82
SYNCRIP-202ENST00000369622 ABCA6Q8N139 1617 aa20.15■□□□□ 0.82
SYNCRIP-202ENST00000369622 MAP3K4Q9Y6R4 1608 aa20.14■□□□□ 0.81
SYNCRIP-202ENST00000369622 ITPRIPQ8IWB1 547 aa20.13■□□□□ 0.81
SYNCRIP-202ENST00000369622 EVC2Q86UK5 1308 aa20.13■□□□□ 0.81
SYNCRIP-202ENST00000369622 UHRF1BP1LA0JNW5 1464 aa20.12■□□□□ 0.81
SYNCRIP-202ENST00000369622 EXOSC9Q06265 439 aaKnown RBP20.12■□□□□ 0.81
SYNCRIP-202ENST00000369622 ZKSCAN2Q63HK3 967 aa20.11■□□□□ 0.81
SYNCRIP-202ENST00000369622 BBXQ8WY36 941 aaPredicted RBP20.11■□□□□ 0.81
SYNCRIP-202ENST00000369622 MFAP1P55081 439 aaKnown RBP20.11■□□□□ 0.81
SYNCRIP-202ENST00000369622 DZIP1LQ8IYY4 767 aaKnown RBP20.11■□□□□ 0.81
SYNCRIP-202ENST00000369622 MYOM2P54296 1465 aa20.1■□□□□ 0.81
SYNCRIP-202ENST00000369622 NINLQ9Y2I6 1382 aa20.09■□□□□ 0.81
SYNCRIP-202ENST00000369622 FSD2A1L4K1 749 aa20.09■□□□□ 0.81
SYNCRIP-202ENST00000369622 TPM2P07951 284 aa20.09■□□□□ 0.81
SYNCRIP-202ENST00000369622 MVPQ14764 893 aaKnown RBP20.09■□□□□ 0.81
SYNCRIP-202ENST00000369622 MINK1Q8N4C8 1332 aaPredicted RBP20.08■□□□□ 0.81
SYNCRIP-202ENST00000369622 RAPGEF3O95398 923 aa20.08■□□□□ 0.8
SYNCRIP-202ENST00000369622 VGFO15240 615 aaPredicted RBP20.06■□□□□ 0.8
SYNCRIP-202ENST00000369622 ASXL2Q76L83 1435 aa20.06■□□□□ 0.8
SYNCRIP-202ENST00000369622 GRPEL1Q9HAV7 217 aa20.06■□□□□ 0.8
SYNCRIP-202ENST00000369622 KIF1BO60333 1816 aa20.06■□□□□ 0.8
SYNCRIP-202ENST00000369622 TBC1D2Q9BYX2 928 aa20.06■□□□□ 0.8
SYNCRIP-202ENST00000369622 SBNO2Q9Y2G9 1366 aa20.06■□□□□ 0.8
SYNCRIP-202ENST00000369622 TRAK2O60296 914 aa20.05■□□□□ 0.8
SYNCRIP-202ENST00000369622 DEPDC5O75140 1603 aa20.05■□□□□ 0.8
SYNCRIP-202ENST00000369622 SSH1Q8WYL5 1049 aa20.05■□□□□ 0.8
SYNCRIP-202ENST00000369622 NPATQ14207 1427 aa20.05■□□□□ 0.8
SYNCRIP-202ENST00000369622 TRIM27P14373 513 aa20.04■□□□□ 0.8
SYNCRIP-202ENST00000369622 FBLN1P23142 703 aa20.04■□□□□ 0.8
SYNCRIP-202ENST00000369622 PHF23Q9BUL5 403 aaPredicted RBP20.04■□□□□ 0.8
SYNCRIP-202ENST00000369622 CHMP4BQ9H444 224 aaKnown RBP20.04■□□□□ 0.8
SYNCRIP-202ENST00000369622 RIPK4P57078 832 aa20.04■□□□□ 0.8
SYNCRIP-202ENST00000369622 TBC1D32Q96NH3 1257 aa20.04■□□□□ 0.8
SYNCRIP-202ENST00000369622 NOB1Q9ULX3 412 aaKnown RBP20.04■□□□□ 0.8
SYNCRIP-202ENST00000369622 MCM4P33991 863 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms