RNA–Protein interactions for RNA: ENST00000369518.1

SYCP1-201, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYCP1, Length 3,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-201ENST00000369518 C19orf44Q9H6X5 657 aa8.48□□□□□ -1.05
SYCP1-201ENST00000369518 POLR3GLQ9BT43 218 aa8.48□□□□□ -1.05
SYCP1-201ENST00000369518 SLAIN2Q9P270 581 aa8.48□□□□□ -1.05
SYCP1-201ENST00000369518 RRP7BPQ9NSQ0 103 aa8.47□□□□□ -1.05
SYCP1-201ENST00000369518 STAG3Q9UJ98 1225 aa8.47□□□□□ -1.05
SYCP1-201ENST00000369518 PTPRUQ92729 1446 aa8.47□□□□□ -1.05
SYCP1-201ENST00000369518 ADGRB2O60241 1585 aa8.47□□□□□ -1.05
SYCP1-201ENST00000369518 ABCA3Q99758 1704 aa8.45□□□□□ -1.06
SYCP1-201ENST00000369518 LRP5O75197 1615 aa8.45□□□□□ -1.06
SYCP1-201ENST00000369518 FOXD1Q16676 465 aa8.45□□□□□ -1.06
SYCP1-201ENST00000369518 DLC1Q96QB1 1528 aa8.44□□□□□ -1.06
SYCP1-201ENST00000369518 BCANQ96GW7 911 aa8.44□□□□□ -1.06
SYCP1-201ENST00000369518 SIRT1Q96EB6 747 aa8.43□□□□□ -1.06
SYCP1-201ENST00000369518 PNPLA6Q8IY17 1366 aa8.42□□□□□ -1.06
SYCP1-201ENST00000369518 NRXN1Q9ULB1 1477 aa8.42□□□□□ -1.06
SYCP1-201ENST00000369518 MYOM2P54296 1465 aa8.42□□□□□ -1.06
SYCP1-201ENST00000369518 ATRNO75882 1429 aa8.42□□□□□ -1.06
SYCP1-201ENST00000369518 C1orf167Q5SNV9 1468 aa8.41□□□□□ -1.06
SYCP1-201ENST00000369518 CENPBP07199 599 aaPredicted RBP8.41□□□□□ -1.06
SYCP1-201ENST00000369518 ATF3P18847 181 aa8.41□□□□□ -1.06
SYCP1-201ENST00000369518 POTEAQ6S8J7 498 aa8.41□□□□□ -1.06
SYCP1-201ENST00000369518 ITSN1Q15811 1721 aa8.41□□□□□ -1.06
SYCP1-201ENST00000369518 CRYBG1Q9Y4K1 1723 aa8.41□□□□□ -1.06
SYCP1-201ENST00000369518 IGSF3O75054 1194 aa8.41□□□□□ -1.06
SYCP1-201ENST00000369518 PXDNQ92626 1479 aa8.4□□□□□ -1.06
SYCP1-201ENST00000369518 KIAA1210Q9ULL0 1709 aa8.4□□□□□ -1.06
SYCP1-201ENST00000369518 ZEB1P37275 1124 aaPredicted RBP8.4□□□□□ -1.06
SYCP1-201ENST00000369518 LRRC59Q96AG4 307 aaKnown RBP8.4□□□□□ -1.06
SYCP1-201ENST00000369518 NAIPQ13075 1403 aa8.4□□□□□ -1.07
SYCP1-201ENST00000369518 LRPPRCP42704 1394 aaKnown RBP8.4□□□□□ -1.07
SYCP1-201ENST00000369518 SOS2Q07890 1332 aaPredicted RBP8.4□□□□□ -1.07
SYCP1-201ENST00000369518 PPP1R15AO75807 674 aaPredicted RBP8.39□□□□□ -1.07
SYCP1-201ENST00000369518 NEFLP07196 543 aa8.39□□□□□ -1.07
SYCP1-201ENST00000369518 CCDC125Q86Z20 511 aa8.39□□□□□ -1.07
SYCP1-201ENST00000369518 RGPD1P0DJD0 1748 aa8.39□□□□□ -1.07
SYCP1-201ENST00000369518 NRAPQ86VF7 1730 aa8.39□□□□□ -1.07
SYCP1-201ENST00000369518 NUP155O75694 1391 aa8.39□□□□□ -1.07
SYCP1-201ENST00000369518 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.39□□□□□ -1.07
SYCP1-201ENST00000369518 SALL2Q9Y467 1007 aaPredicted RBP8.39□□□□□ -1.07
SYCP1-201ENST00000369518 PLCH1Q4KWH8 1693 aa8.39□□□□□ -1.07
SYCP1-201ENST00000369518 BRINP3Q76B58 766 aa8.39□□□□□ -1.07
SYCP1-201ENST00000369518 RGPD3A6NKT7 1758 aaPredicted RBP8.38□□□□□ -1.07
SYCP1-201ENST00000369518 RGPD4Q7Z3J3 1758 aa8.38□□□□□ -1.07
SYCP1-201ENST00000369518 USP32Q8NFA0 1604 aa8.38□□□□□ -1.07
SYCP1-201ENST00000369518 ANKRD30BQ9BXX2 1392 aa8.38□□□□□ -1.07
SYCP1-201ENST00000369518 ARID3AQ99856 593 aa8.38□□□□□ -1.07
SYCP1-201ENST00000369518 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.38□□□□□ -1.07
SYCP1-201ENST00000369518 TRPM3Q9HCF6 1732 aaPredicted RBP8.38□□□□□ -1.07
SYCP1-201ENST00000369518 ATAD2Q6PL18 1390 aa8.38□□□□□ -1.07
SYCP1-201ENST00000369518 SLC26A8Q96RN1 970 aa8.38□□□□□ -1.07
SYCP1-201ENST00000369518 AMOTL2Q9Y2J4 779 aa8.37□□□□□ -1.07
SYCP1-201ENST00000369518 RGS12O14924 1447 aa8.37□□□□□ -1.07
SYCP1-201ENST00000369518 ANKARQ7Z5J8 1434 aa8.37□□□□□ -1.07
SYCP1-201ENST00000369518 ALS2Q96Q42 1657 aa8.37□□□□□ -1.07
SYCP1-201ENST00000369518 VGFO15240 615 aaPredicted RBP8.37□□□□□ -1.07
SYCP1-201ENST00000369518 COL14A1Q05707 1796 aaKnown RBP8.37□□□□□ -1.07
SYCP1-201ENST00000369518 RBM6P78332 1123 aaKnown RBP8.36□□□□□ -1.07
SYCP1-201ENST00000369518 SPATA31E1Q6ZUB1 1445 aa8.36□□□□□ -1.07
SYCP1-201ENST00000369518 ABCC11Q96J66 1382 aa8.36□□□□□ -1.07
SYCP1-201ENST00000369518 UPF1Q92900 1129 aaKnown RBP eCLIP8.36□□□□□ -1.07
SYCP1-201ENST00000369518 EIF3AQ14152 1382 aaKnown RBP8.36□□□□□ -1.07
SYCP1-201ENST00000369518 RXRBP28702 533 aa8.35□□□□□ -1.07
SYCP1-201ENST00000369518 STAC3Q96MF2 364 aa8.35□□□□□ -1.07
SYCP1-201ENST00000369518 METP08581 1390 aa8.35□□□□□ -1.07
SYCP1-201ENST00000369518 CCDC144AA2RUR9 1427 aa8.35□□□□□ -1.07
SYCP1-201ENST00000369518 PIK3C2GO75747 1445 aa8.35□□□□□ -1.07
SYCP1-201ENST00000369518 FNBP4Q8N3X1 1017 aaPredicted RBP8.35□□□□□ -1.07
SYCP1-201ENST00000369518 SLIT2O94813 1529 aa8.35□□□□□ -1.07
SYCP1-201ENST00000369518 NGLY1Q96IV0 654 aa8.34□□□□□ -1.07
SYCP1-201ENST00000369518 SBNO1A3KN83 1393 aa8.34□□□□□ -1.07
SYCP1-201ENST00000369518 TOPAZ1Q8N9V7 1692 aa8.33□□□□□ -1.08
SYCP1-201ENST00000369518 BRWD3Q6RI45 1802 aa8.33□□□□□ -1.08
SYCP1-201ENST00000369518 THSD7AQ9UPZ6 1657 aa8.33□□□□□ -1.08
SYCP1-201ENST00000369518 TMEM132AQ24JP5 1023 aa8.33□□□□□ -1.08
SYCP1-201ENST00000369518 GLI3P10071 1580 aa8.32□□□□□ -1.08
SYCP1-201ENST00000369518 PLCB2Q00722 1185 aa8.32□□□□□ -1.08
SYCP1-201ENST00000369518 CHIC2Q9UKJ5 165 aa8.32□□□□□ -1.08
SYCP1-201ENST00000369518 NPHP3Q7Z494 1330 aa8.32□□□□□ -1.08
SYCP1-201ENST00000369518 MEX3CQ5U5Q3 659 aaKnown RBP8.32□□□□□ -1.08
SYCP1-201ENST00000369518 AFF2P51816 1311 aa8.31□□□□□ -1.08
SYCP1-201ENST00000369518 FAM50AQ14320 339 aaKnown RBP8.31□□□□□ -1.08
SYCP1-201ENST00000369518 DISP2A7MBM2 1401 aa8.31□□□□□ -1.08
SYCP1-201ENST00000369518 TRPC5Q9UL62 973 aaPredicted RBP8.31□□□□□ -1.08
SYCP1-201ENST00000369518 RREB1Q92766 1687 aa8.31□□□□□ -1.08
SYCP1-201ENST00000369518 TNS1Q9HBL0 1735 aaKnown RBP8.3□□□□□ -1.08
SYCP1-201ENST00000369518 BRD4O60885 1362 aaPredicted RBP8.3□□□□□ -1.08
SYCP1-201ENST00000369518 ROBO2Q9HCK4 1378 aa8.3□□□□□ -1.08
SYCP1-201ENST00000369518 PPARGC1BQ86YN6 1023 aaKnown RBP8.3□□□□□ -1.08
SYCP1-201ENST00000369518 USP54Q70EL1 1684 aa8.29□□□□□ -1.08
SYCP1-201ENST00000369518 WNK3Q9BYP7 1800 aa8.29□□□□□ -1.08
SYCP1-201ENST00000369518 FGD1P98174 961 aa8.29□□□□□ -1.08
SYCP1-201ENST00000369518 RGPD8O14715 1765 aaPredicted RBP8.29□□□□□ -1.08
SYCP1-201ENST00000369518 PHRF1Q9P1Y6 1649 aaKnown RBP8.29□□□□□ -1.08
SYCP1-201ENST00000369518 ATP7BP35670 1465 aa8.29□□□□□ -1.08
SYCP1-201ENST00000369518 BCL9LQ86UU0 1499 aa8.29□□□□□ -1.08
SYCP1-201ENST00000369518 TNS3Q68CZ2 1445 aa8.29□□□□□ -1.08
SYCP1-201ENST00000369518 ABCC6O95255 1503 aa8.29□□□□□ -1.08
SYCP1-201ENST00000369518 ARHGEF28Q8N1W1 1705 aaKnown RBP8.28□□□□□ -1.08
SYCP1-201ENST00000369518 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.28□□□□□ -1.08
SYCP1-201ENST00000369518 ARHGEF10O15013 1369 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms