RNA–Protein interactions for RNA: ENST00000368881.8

PSMD4-201, Transcript of proteasome 26S subunit, non-ATPase 4, humanhuman

TSL 5 BASIC

Gene PSMD4, Length 1,333 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4-201ENST00000368881 NPC1L1Q9UHC9 1359 aa24.23■■□□□ 1.47
PSMD4-201ENST00000368881 KNSTRNQ9Y448 316 aa24.21■■□□□ 1.47
PSMD4-201ENST00000368881 PTCH1Q13635 1447 aa24.18■■□□□ 1.46
PSMD4-201ENST00000368881 PARD3Q8TEW0 1356 aa24.17■■□□□ 1.46
PSMD4-201ENST00000368881 MYBBP1AQ9BQG0 1328 aaKnown RBP24.17■■□□□ 1.46
PSMD4-201ENST00000368881 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
PSMD4-201ENST00000368881 ADGRB2O60241 1585 aa24.16■■□□□ 1.46
PSMD4-201ENST00000368881 USP32Q8NFA0 1604 aa24.15■■□□□ 1.46
PSMD4-201ENST00000368881 MINK1Q8N4C8 1332 aaPredicted RBP24.14■■□□□ 1.45
PSMD4-201ENST00000368881 SRPK2P78362 688 aaKnown RBP24.13■■□□□ 1.45
PSMD4-201ENST00000368881 XRN1Q8IZH2 1706 aaKnown RBP24.13■■□□□ 1.45
PSMD4-201ENST00000368881 ANKRD36BQ8N2N9 1353 aa24.13■■□□□ 1.45
PSMD4-201ENST00000368881 SAFB2Q14151 953 aaKnown RBP eCLIP24.12■■□□□ 1.45
PSMD4-201ENST00000368881 BRD4O60885 1362 aaPredicted RBP24.12■■□□□ 1.45
PSMD4-201ENST00000368881 YTHDC1Q96MU7 727 aaKnown RBP24.1■■□□□ 1.45
PSMD4-201ENST00000368881 MRS2Q9HD23 443 aa24.1■■□□□ 1.45
PSMD4-201ENST00000368881 SLC26A8Q96RN1 970 aa24.1■■□□□ 1.45
PSMD4-201ENST00000368881 NPHP4O75161 1426 aaPredicted RBP24.09■■□□□ 1.45
PSMD4-201ENST00000368881 WAPLQ7Z5K2 1190 aa24.09■■□□□ 1.45
PSMD4-201ENST00000368881 TMC1Q8TDI8 760 aa24.09■■□□□ 1.45
PSMD4-201ENST00000368881 ROBO2Q9HCK4 1378 aa24.08■■□□□ 1.45
PSMD4-201ENST00000368881 PLEKHH1Q9ULM0 1364 aa24.08■■□□□ 1.45
PSMD4-201ENST00000368881 PTPRUQ92729 1446 aa24.08■■□□□ 1.45
PSMD4-201ENST00000368881 AMER1Q5JTC6 1135 aaPredicted RBP24.08■■□□□ 1.44
PSMD4-201ENST00000368881 NLRP13Q86W25 1043 aa24.08■■□□□ 1.44
PSMD4-201ENST00000368881 CDK19Q9BWU1 502 aa24.08■■□□□ 1.44
PSMD4-201ENST00000368881 CABP2Q9NPB3 220 aa24.08■■□□□ 1.44
PSMD4-201ENST00000368881 TERF2IPQ9NYB0 399 aa24.07■■□□□ 1.44
PSMD4-201ENST00000368881 AMOTL2Q9Y2J4 779 aa24.07■■□□□ 1.44
PSMD4-201ENST00000368881 NSD2O96028 1365 aa24.06■■□□□ 1.44
PSMD4-201ENST00000368881 WASLO00401 505 aaPredicted RBP24.06■■□□□ 1.44
PSMD4-201ENST00000368881 ATP7BP35670 1465 aa24.06■■□□□ 1.44
PSMD4-201ENST00000368881 CHD2O14647 1828 aaKnown RBP24.05■■□□□ 1.44
PSMD4-201ENST00000368881 NSD3Q9BZ95 1437 aa24.04■■□□□ 1.44
PSMD4-201ENST00000368881 SLC12A5Q9H2X9 1139 aa24.04■■□□□ 1.44
PSMD4-201ENST00000368881 CC2D1BQ5T0F9 858 aaKnown RBP24.03■■□□□ 1.44
PSMD4-201ENST00000368881 CGNL1Q0VF96 1302 aa24.02■■□□□ 1.44
PSMD4-201ENST00000368881 HDGFL2Q7Z4V5 671 aaPredicted RBP24.02■■□□□ 1.44
PSMD4-201ENST00000368881 SIPA1L2Q9P2F8 1722 aaPredicted RBP24■■□□□ 1.43
PSMD4-201ENST00000368881 CARD14Q9BXL6 1004 aa23.99■■□□□ 1.43
PSMD4-201ENST00000368881 NWD1Q149M9 1564 aa23.98■■□□□ 1.43
PSMD4-201ENST00000368881 A0A1W2PP64 1363 aa23.97■■□□□ 1.43
PSMD4-201ENST00000368881 ITSN1Q15811 1721 aa23.96■■□□□ 1.43
PSMD4-201ENST00000368881 CNGB1Q14028 1251 aaPredicted RBP23.96■■□□□ 1.43
PSMD4-201ENST00000368881 CCDC61Q9Y6R9 512 aa23.95■■□□□ 1.42
PSMD4-201ENST00000368881 INSRP06213 1382 aa23.95■■□□□ 1.42
PSMD4-201ENST00000368881 CDC42BPGQ6DT37 1551 aa23.95■■□□□ 1.42
PSMD4-201ENST00000368881 TOPAZ1Q8N9V7 1692 aa23.94■■□□□ 1.42
PSMD4-201ENST00000368881 KDM4FA0A1W2PPD8 638 aa23.94■■□□□ 1.42
PSMD4-201ENST00000368881 CCDC184Q52MB2 194 aa23.94■■□□□ 1.42
PSMD4-201ENST00000368881 CD163L1Q9NR16 1453 aa23.94■■□□□ 1.42
PSMD4-201ENST00000368881 PPIP5K1Q6PFW1 1433 aa23.94■■□□□ 1.42
PSMD4-201ENST00000368881 ANKRD26Q9UPS8 1709 aa23.93■■□□□ 1.42
PSMD4-201ENST00000368881 NUDT16Q96DE0 195 aaKnown RBP23.93■■□□□ 1.42
PSMD4-201ENST00000368881 ANKARQ7Z5J8 1434 aa23.92■■□□□ 1.42
PSMD4-201ENST00000368881 KCNA6P17658 529 aa23.91■■□□□ 1.42
PSMD4-201ENST00000368881 CABP1Q9NZU7 370 aa23.91■■□□□ 1.42
PSMD4-201ENST00000368881 NKTRP30414 1462 aaKnown RBP23.91■■□□□ 1.42
PSMD4-201ENST00000368881 PPP2R1AP30153 589 aa23.9■■□□□ 1.42
PSMD4-201ENST00000368881 ZNF692Q9BU19 519 aaPredicted RBP23.9■■□□□ 1.42
PSMD4-201ENST00000368881 AKAP12Q02952 1782 aa23.9■■□□□ 1.42
PSMD4-201ENST00000368881 CPSF1Q10570 1443 aaKnown RBP23.9■■□□□ 1.42
PSMD4-201ENST00000368881 KIF20BQ96Q89 1820 aa23.9■■□□□ 1.42
PSMD4-201ENST00000368881 FAM9BQ8IZU0 186 aa23.89■■□□□ 1.42
PSMD4-201ENST00000368881 PNISRQ8TF01 805 aaKnown RBP23.89■■□□□ 1.42
PSMD4-201ENST00000368881 EDC4Q6P2E9 1401 aaKnown RBP23.89■■□□□ 1.42
PSMD4-201ENST00000368881 MON2Q7Z3U7 1717 aa23.89■■□□□ 1.42
PSMD4-201ENST00000368881 NCKAP5LQ9HCH0 1330 aa23.89■■□□□ 1.41
PSMD4-201ENST00000368881 MORC1Q86VD1 984 aa23.87■■□□□ 1.41
PSMD4-201ENST00000368881 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
PSMD4-201ENST00000368881 LMTK3Q96Q04 1460 aa23.86■■□□□ 1.41
PSMD4-201ENST00000368881 PLEKHG3A1L390 1219 aa23.84■■□□□ 1.41
PSMD4-201ENST00000368881 NALCNQ8IZF0 1738 aa23.84■■□□□ 1.41
PSMD4-201ENST00000368881 ADGRL3Q9HAR2 1447 aa23.84■■□□□ 1.41
PSMD4-201ENST00000368881 HNRNPUQ00839 825 aaKnown RBP eCLIP23.84■■□□□ 1.41
PSMD4-201ENST00000368881 PRR36Q9H6K5 1346 aa23.82■■□□□ 1.4
PSMD4-201ENST00000368881 NCOA3Q9Y6Q9 1424 aa23.81■■□□□ 1.4
PSMD4-201ENST00000368881 POLR3AO14802 1390 aaPredicted RBP23.81■■□□□ 1.4
PSMD4-201ENST00000368881 ZBED9Q6R2W3 1325 aa23.78■■□□□ 1.4
PSMD4-201ENST00000368881 NRKQ7Z2Y5 1582 aa23.77■■□□□ 1.4
PSMD4-201ENST00000368881 SCAF1Q9H7N4 1312 aaKnown RBP23.77■■□□□ 1.4
PSMD4-201ENST00000368881 FYB1O15117 783 aa23.77■■□□□ 1.4
PSMD4-201ENST00000368881 WDR43Q15061 677 aaKnown RBP eCLIP23.76■■□□□ 1.39
PSMD4-201ENST00000368881 CFAP53Q96M91 514 aa23.76■■□□□ 1.39
PSMD4-201ENST00000368881 USP6P35125 1406 aa23.75■■□□□ 1.39
PSMD4-201ENST00000368881 BLMP54132 1417 aaPredicted RBP23.74■■□□□ 1.39
PSMD4-201ENST00000368881 ACEP12821 1306 aa23.73■■□□□ 1.39
PSMD4-201ENST00000368881 STRCQ7RTU9 1775 aa23.73■■□□□ 1.39
PSMD4-201ENST00000368881 TTC21AQ8NDW8 1320 aa23.72■■□□□ 1.39
PSMD4-201ENST00000368881 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
PSMD4-201ENST00000368881 DCCP43146 1447 aa23.71■■□□□ 1.39
PSMD4-201ENST00000368881 PROSER2Q86WR7 435 aaPredicted RBP23.71■■□□□ 1.39
PSMD4-201ENST00000368881 GGNBP2Q9H3C7 697 aa23.71■■□□□ 1.39
PSMD4-201ENST00000368881 HSPA2P54652 639 aa23.7■■□□□ 1.38
PSMD4-201ENST00000368881 C14orf37Q86TY3 774 aa23.69■■□□□ 1.38
PSMD4-201ENST00000368881 AATKQ6ZMQ8 1374 aa23.68■■□□□ 1.38
PSMD4-201ENST00000368881 TTC21BQ7Z4L5 1316 aa23.68■■□□□ 1.38
PSMD4-201ENST00000368881 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.67■■□□□ 1.38
PSMD4-201ENST00000368881 NGDNQ8NEJ9 315 aaKnown RBP23.67■■□□□ 1.38
PSMD4-201ENST00000368881 COG3Q96JB2 828 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms