RNA–Protein interactions for RNA: ENST00000368694.7

CHTOP-204, Transcript of chromatin target of PRMT1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHTOP, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-204ENST00000368694 PER1O15534 1290 aaPredicted RBP26.59■■□□□ 1.85
CHTOP-204ENST00000368694 FAM135BQ49AJ0 1406 aa26.58■■□□□ 1.84
CHTOP-204ENST00000368694 SRPK2P78362 688 aaKnown RBP26.58■■□□□ 1.84
CHTOP-204ENST00000368694 TMC1Q8TDI8 760 aa26.57■■□□□ 1.84
CHTOP-204ENST00000368694 CABP2Q9NPB3 220 aa26.57■■□□□ 1.84
CHTOP-204ENST00000368694 PTPRUQ92729 1446 aa26.55■■□□□ 1.84
CHTOP-204ENST00000368694 PUS7Q96PZ0 661 aaKnown RBP26.55■■□□□ 1.84
CHTOP-204ENST00000368694 SIRT1Q96EB6 747 aa26.54■■□□□ 1.84
CHTOP-204ENST00000368694 KTN1Q86UP2 1357 aaKnown RBP26.54■■□□□ 1.84
CHTOP-204ENST00000368694 KDM4FA0A1W2PPD8 638 aa26.54■■□□□ 1.84
CHTOP-204ENST00000368694 KNSTRNQ9Y448 316 aa26.54■■□□□ 1.84
CHTOP-204ENST00000368694 ROBO2Q9HCK4 1378 aa26.53■■□□□ 1.84
CHTOP-204ENST00000368694 AMOTL2Q9Y2J4 779 aa26.51■■□□□ 1.83
CHTOP-204ENST00000368694 SLC12A5Q9H2X9 1139 aa26.51■■□□□ 1.83
CHTOP-204ENST00000368694 CC2D1BQ5T0F9 858 aaKnown RBP26.5■■□□□ 1.83
CHTOP-204ENST00000368694 CDK19Q9BWU1 502 aa26.5■■□□□ 1.83
CHTOP-204ENST00000368694 ATAD2Q6PL18 1390 aa26.5■■□□□ 1.83
CHTOP-204ENST00000368694 RALBP1Q15311 655 aa26.49■■□□□ 1.83
CHTOP-204ENST00000368694 XRN1Q8IZH2 1706 aaKnown RBP26.49■■□□□ 1.83
CHTOP-204ENST00000368694 NPHP4O75161 1426 aaPredicted RBP26.48■■□□□ 1.83
CHTOP-204ENST00000368694 PIK3R4Q99570 1358 aa26.48■■□□□ 1.83
CHTOP-204ENST00000368694 PTCH1Q13635 1447 aa26.47■■□□□ 1.83
CHTOP-204ENST00000368694 PARD3Q8TEW0 1356 aa26.45■■□□□ 1.83
CHTOP-204ENST00000368694 NINLQ9Y2I6 1382 aa26.45■■□□□ 1.83
CHTOP-204ENST00000368694 NCKAP5LQ9HCH0 1330 aa26.45■■□□□ 1.83
CHTOP-204ENST00000368694 MRS2Q9HD23 443 aa26.45■■□□□ 1.83
CHTOP-204ENST00000368694 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.45■■□□□ 1.82
CHTOP-204ENST00000368694 CCDC184Q52MB2 194 aa26.45■■□□□ 1.82
CHTOP-204ENST00000368694 CHD2O14647 1828 aaKnown RBP26.44■■□□□ 1.82
CHTOP-204ENST00000368694 MYBBP1AQ9BQG0 1328 aaKnown RBP26.44■■□□□ 1.82
CHTOP-204ENST00000368694 WASLO00401 505 aaPredicted RBP26.43■■□□□ 1.82
CHTOP-204ENST00000368694 CARD14Q9BXL6 1004 aa26.43■■□□□ 1.82
CHTOP-204ENST00000368694 AMER1Q5JTC6 1135 aaPredicted RBP26.43■■□□□ 1.82
CHTOP-204ENST00000368694 ANKRD36BQ8N2N9 1353 aa26.42■■□□□ 1.82
CHTOP-204ENST00000368694 ADGRB2O60241 1585 aa26.42■■□□□ 1.82
CHTOP-204ENST00000368694 NSD3Q9BZ95 1437 aa26.42■■□□□ 1.82
CHTOP-204ENST00000368694 KCNA6P17658 529 aa26.4■■□□□ 1.82
CHTOP-204ENST00000368694 CENPBP07199 599 aaPredicted RBP26.38■■□□□ 1.81
CHTOP-204ENST00000368694 NPC1L1Q9UHC9 1359 aa26.37■■□□□ 1.81
CHTOP-204ENST00000368694 A0A1W2PP64 1363 aa26.36■■□□□ 1.81
CHTOP-204ENST00000368694 USP32Q8NFA0 1604 aa26.36■■□□□ 1.81
CHTOP-204ENST00000368694 TERF2IPQ9NYB0 399 aa26.35■■□□□ 1.81
CHTOP-204ENST00000368694 CABP1Q9NZU7 370 aa26.35■■□□□ 1.81
CHTOP-204ENST00000368694 HSPA2P54652 639 aa26.35■■□□□ 1.81
CHTOP-204ENST00000368694 NLRP13Q86W25 1043 aa26.34■■□□□ 1.81
CHTOP-204ENST00000368694 BRD4O60885 1362 aaPredicted RBP26.33■■□□□ 1.81
CHTOP-204ENST00000368694 PPIP5K1Q6PFW1 1433 aa26.32■■□□□ 1.8
CHTOP-204ENST00000368694 HDGFL2Q7Z4V5 671 aaPredicted RBP26.32■■□□□ 1.8
CHTOP-204ENST00000368694 NUDT16Q96DE0 195 aaKnown RBP26.32■■□□□ 1.8
CHTOP-204ENST00000368694 LMTK3Q96Q04 1460 aa26.32■■□□□ 1.8
CHTOP-204ENST00000368694 CD163L1Q9NR16 1453 aa26.32■■□□□ 1.8
CHTOP-204ENST00000368694 FAM9BQ8IZU0 186 aa26.32■■□□□ 1.8
CHTOP-204ENST00000368694 ATP7BP35670 1465 aa26.31■■□□□ 1.8
CHTOP-204ENST00000368694 CGNL1Q0VF96 1302 aa26.31■■□□□ 1.8
CHTOP-204ENST00000368694 CCDC61Q9Y6R9 512 aa26.29■■□□□ 1.8
CHTOP-204ENST00000368694 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
CHTOP-204ENST00000368694 ITSN1Q15811 1721 aa26.27■■□□□ 1.8
CHTOP-204ENST00000368694 NALCNQ8IZF0 1738 aa26.26■■□□□ 1.8
CHTOP-204ENST00000368694 PRR36Q9H6K5 1346 aa26.26■■□□□ 1.8
CHTOP-204ENST00000368694 NWD1Q149M9 1564 aa26.26■■□□□ 1.79
CHTOP-204ENST00000368694 TOPAZ1Q8N9V7 1692 aa26.26■■□□□ 1.79
CHTOP-204ENST00000368694 CDC42BPGQ6DT37 1551 aa26.25■■□□□ 1.79
CHTOP-204ENST00000368694 PPP2R1AP30153 589 aa26.24■■□□□ 1.79
CHTOP-204ENST00000368694 NSD2O96028 1365 aa26.23■■□□□ 1.79
CHTOP-204ENST00000368694 MORC1Q86VD1 984 aa26.23■■□□□ 1.79
CHTOP-204ENST00000368694 RGPD8O14715 1765 aaPredicted RBP26.22■■□□□ 1.79
CHTOP-204ENST00000368694 KIF20BQ96Q89 1820 aa26.22■■□□□ 1.79
CHTOP-204ENST00000368694 RBM33Q96EV2 1170 aaKnown RBP26.22■■□□□ 1.79
CHTOP-204ENST00000368694 AKAP12Q02952 1782 aa26.22■■□□□ 1.79
CHTOP-204ENST00000368694 FMN2Q9NZ56 1722 aa26.21■■□□□ 1.79
CHTOP-204ENST00000368694 STRCQ7RTU9 1775 aa26.2■■□□□ 1.79
CHTOP-204ENST00000368694 CPSF1Q10570 1443 aaKnown RBP26.2■■□□□ 1.79
CHTOP-204ENST00000368694 MON2Q7Z3U7 1717 aa26.2■■□□□ 1.78
CHTOP-204ENST00000368694 ANKRD26Q9UPS8 1709 aa26.2■■□□□ 1.78
CHTOP-204ENST00000368694 PNISRQ8TF01 805 aaKnown RBP26.19■■□□□ 1.78
CHTOP-204ENST00000368694 GTF3C3Q9Y5Q9 886 aa26.19■■□□□ 1.78
CHTOP-204ENST00000368694 HNRNPUQ00839 825 aaKnown RBP eCLIP26.18■■□□□ 1.78
CHTOP-204ENST00000368694 C14orf37Q86TY3 774 aa26.18■■□□□ 1.78
CHTOP-204ENST00000368694 TNNT2P45379 298 aaPredicted RBP26.17■■□□□ 1.78
CHTOP-204ENST00000368694 ADGRL3Q9HAR2 1447 aa26.17■■□□□ 1.78
CHTOP-204ENST00000368694 NKTRP30414 1462 aaKnown RBP26.17■■□□□ 1.78
CHTOP-204ENST00000368694 EDC4Q6P2E9 1401 aaKnown RBP26.16■■□□□ 1.78
CHTOP-204ENST00000368694 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.16■■□□□ 1.78
CHTOP-204ENST00000368694 GGNBP2Q9H3C7 697 aa26.16■■□□□ 1.78
CHTOP-204ENST00000368694 PROSER2Q86WR7 435 aaPredicted RBP26.15■■□□□ 1.78
CHTOP-204ENST00000368694 ANKARQ7Z5J8 1434 aa26.14■■□□□ 1.78
CHTOP-204ENST00000368694 FYB1O15117 783 aa26.14■■□□□ 1.77
CHTOP-204ENST00000368694 STRCP1A6NGW2 1772 aa26.14■■□□□ 1.77
CHTOP-204ENST00000368694 ZNF692Q9BU19 519 aaPredicted RBP26.13■■□□□ 1.77
CHTOP-204ENST00000368694 ACEP12821 1306 aa26.13■■□□□ 1.77
CHTOP-204ENST00000368694 PLEKHG3A1L390 1219 aa26.13■■□□□ 1.77
CHTOP-204ENST00000368694 PMFBP1Q8TBY8 1022 aa26.1■■□□□ 1.77
CHTOP-204ENST00000368694 NRKQ7Z2Y5 1582 aa26.09■■□□□ 1.77
CHTOP-204ENST00000368694 NGDNQ8NEJ9 315 aaKnown RBP26.07■■□□□ 1.76
CHTOP-204ENST00000368694 USP6P35125 1406 aa26.06■■□□□ 1.76
CHTOP-204ENST00000368694 WDR43Q15061 677 aaKnown RBP eCLIP26.04■■□□□ 1.767e-6■■■■■ 27.3
CHTOP-204ENST00000368694 NME9Q86XW9 330 aa26.04■■□□□ 1.76
CHTOP-204ENST00000368694 POLR3AO14802 1390 aaPredicted RBP26.04■■□□□ 1.76
CHTOP-204ENST00000368694 TMEM94Q12767 1356 aa26.02■■□□□ 1.76
CHTOP-204ENST00000368694 MTHFSP49914 203 aa26.02■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms