RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 FGD1P98174 961 aa22.46■■□□□ 1.19
CHTOP-201ENST00000368686 DMRT2Q9Y5R5 561 aa22.46■■□□□ 1.19
CHTOP-201ENST00000368686 RNF17Q9BXT8 1623 aaKnown RBP22.45■■□□□ 1.18
CHTOP-201ENST00000368686 SHROOM2Q13796 1616 aa22.45■■□□□ 1.18
CHTOP-201ENST00000368686 NOL7Q9UMY1 257 aaKnown RBP22.45■■□□□ 1.18
CHTOP-201ENST00000368686 RBM25P49756 843 aaKnown RBP22.44■■□□□ 1.18
CHTOP-201ENST00000368686 UTP14CQ5TAP6 766 aaKnown RBP22.44■■□□□ 1.18
CHTOP-201ENST00000368686 GOLGA6L22H0YM25 854 aa22.43■■□□□ 1.18
CHTOP-201ENST00000368686 RARSP54136 660 aaKnown RBP22.43■■□□□ 1.18
CHTOP-201ENST00000368686 CSPP1Q1MSJ5 1256 aa22.43■■□□□ 1.18
CHTOP-201ENST00000368686 HSP90AB1P08238 724 aaKnown RBP22.42■■□□□ 1.18
CHTOP-201ENST00000368686 KLHL40Q2TBA0 621 aa22.41■■□□□ 1.18
CHTOP-201ENST00000368686 RGL3Q3MIN7 710 aa22.41■■□□□ 1.18
CHTOP-201ENST00000368686 RLBP1P12271 317 aa22.41■■□□□ 1.18
CHTOP-201ENST00000368686 CDCA8Q53HL2 280 aa22.41■■□□□ 1.18
CHTOP-201ENST00000368686 WWC1Q8IX03 1113 aa22.4■■□□□ 1.18
CHTOP-201ENST00000368686 SYNJ2O15056 1496 aa22.39■■□□□ 1.18
CHTOP-201ENST00000368686 CLEC17AQ6ZS10 378 aa22.39■■□□□ 1.17
CHTOP-201ENST00000368686 MCM5P33992 734 aa22.38■■□□□ 1.17
CHTOP-201ENST00000368686 ZNF445P59923 1031 aa22.38■■□□□ 1.17
CHTOP-201ENST00000368686 DMTNQ08495 405 aa22.38■■□□□ 1.17
CHTOP-201ENST00000368686 ARHGAP31Q2M1Z3 1444 aa22.37■■□□□ 1.17
CHTOP-201ENST00000368686 PDLIM2Q96JY6 352 aa22.36■■□□□ 1.17
CHTOP-201ENST00000368686 GRIN2AQ12879 1464 aa22.36■■□□□ 1.17
CHTOP-201ENST00000368686 TSPY4P0CV99 314 aa22.36■■□□□ 1.17
CHTOP-201ENST00000368686 TSPY10P0CW01 314 aa22.36■■□□□ 1.17
CHTOP-201ENST00000368686 DDX49Q9Y6V7 483 aaKnown RBP22.36■■□□□ 1.17
CHTOP-201ENST00000368686 SASS6Q6UVJ0 657 aa22.35■■□□□ 1.17
CHTOP-201ENST00000368686 CCDC94Q9BW85 323 aaPredicted RBP22.35■■□□□ 1.17
CHTOP-201ENST00000368686 IQGAP1P46940 1657 aa22.35■■□□□ 1.17
CHTOP-201ENST00000368686 NCLP19338 710 aaKnown RBP22.34■■□□□ 1.17
CHTOP-201ENST00000368686 XPCQ01831 940 aaPredicted RBP22.34■■□□□ 1.17
CHTOP-201ENST00000368686 MVPQ14764 893 aaKnown RBP22.34■■□□□ 1.17
CHTOP-201ENST00000368686 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.34■■□□□ 1.17
CHTOP-201ENST00000368686 ZKSCAN5Q9Y2L8 839 aa22.34■■□□□ 1.17
CHTOP-201ENST00000368686 MYOM1P52179 1685 aa22.34■■□□□ 1.17
CHTOP-201ENST00000368686 PLA2R1Q13018 1463 aa22.33■■□□□ 1.17
CHTOP-201ENST00000368686 ZHX1Q9UKY1 873 aaPredicted RBP22.33■■□□□ 1.16
CHTOP-201ENST00000368686 TNNQ9UQP3 1299 aa22.33■■□□□ 1.16
CHTOP-201ENST00000368686 HDAC1Q13547 482 aaPredicted RBP22.32■■□□□ 1.16
CHTOP-201ENST00000368686 ARHGEF5Q12774 1597 aa22.3■■□□□ 1.16
CHTOP-201ENST00000368686 PRDM10Q9NQV6 1147 aa22.29■■□□□ 1.16
CHTOP-201ENST00000368686 K7ELQ4 463 aaPredicted RBP22.29■■□□□ 1.16
CHTOP-201ENST00000368686 BAG4O95429 457 aaKnown RBP22.28■■□□□ 1.16
CHTOP-201ENST00000368686 SSFA2P28290 1259 aa22.28■■□□□ 1.16
CHTOP-201ENST00000368686 TNNT2P45379 298 aaPredicted RBP22.28■■□□□ 1.16
CHTOP-201ENST00000368686 ZSCAN20P17040 1043 aaPredicted RBP22.27■■□□□ 1.16
CHTOP-201ENST00000368686 WDR63Q8IWG1 891 aa22.27■■□□□ 1.16
CHTOP-201ENST00000368686 UNC13BO14795 1591 aa22.26■■□□□ 1.15
CHTOP-201ENST00000368686 CCDC39Q9UFE4 941 aa22.26■■□□□ 1.15
CHTOP-201ENST00000368686 POLR3AO14802 1390 aaPredicted RBP22.26■■□□□ 1.15
CHTOP-201ENST00000368686 KANK1Q14678 1352 aa22.26■■□□□ 1.15
CHTOP-201ENST00000368686 ZSCAN23Q3MJ62 389 aa22.26■■□□□ 1.15
CHTOP-201ENST00000368686 ARID3AQ99856 593 aa22.26■■□□□ 1.15
CHTOP-201ENST00000368686 SLC24A1O60721 1099 aa22.25■■□□□ 1.15
CHTOP-201ENST00000368686 ZKSCAN2Q63HK3 967 aa22.25■■□□□ 1.15
CHTOP-201ENST00000368686 FTSJ3Q8IY81 847 aaKnown RBP22.24■■□□□ 1.15
CHTOP-201ENST00000368686 BCL2L13Q9BXK5 485 aa22.24■■□□□ 1.15
CHTOP-201ENST00000368686 GTPBP4Q9BZE4 634 aaKnown RBP22.24■■□□□ 1.15
CHTOP-201ENST00000368686 DZIP1LQ8IYY4 767 aaKnown RBP22.24■■□□□ 1.15
CHTOP-201ENST00000368686 RBSNQ9H1K0 784 aa22.24■■□□□ 1.15
CHTOP-201ENST00000368686 IQSEC2Q5JU85 1478 aa22.24■■□□□ 1.15
CHTOP-201ENST00000368686 KDM5AP29375 1690 aaKnown RBP22.23■■□□□ 1.15
CHTOP-201ENST00000368686 KIF2CQ99661 725 aa22.23■■□□□ 1.15
CHTOP-201ENST00000368686 PHF23Q9BUL5 403 aaPredicted RBP22.23■■□□□ 1.15
CHTOP-201ENST00000368686 KIF20AO95235 890 aa22.23■■□□□ 1.15
CHTOP-201ENST00000368686 ATP10AO60312 1499 aa22.22■■□□□ 1.15
CHTOP-201ENST00000368686 CAVIN1Q6NZI2 390 aaKnown RBP22.22■■□□□ 1.15
CHTOP-201ENST00000368686 FOXD4L1Q9NU39 408 aa22.22■■□□□ 1.15
CHTOP-201ENST00000368686 RUNDC1Q96C34 613 aa22.21■■□□□ 1.15
CHTOP-201ENST00000368686 SCAF11Q99590 1463 aaKnown RBP22.21■■□□□ 1.15
CHTOP-201ENST00000368686 MADDQ8WXG6 1647 aa22.21■■□□□ 1.15
CHTOP-201ENST00000368686 PLB1Q6P1J6 1458 aa22.2■■□□□ 1.14
CHTOP-201ENST00000368686 SHPRHQ149N8 1683 aa22.2■■□□□ 1.14
CHTOP-201ENST00000368686 CD2BP2O95400 341 aaKnown RBP22.19■■□□□ 1.14
CHTOP-201ENST00000368686 MYRIPQ8NFW9 859 aa22.19■■□□□ 1.14
CHTOP-201ENST00000368686 IQGAP3Q86VI3 1631 aa22.19■■□□□ 1.14
CHTOP-201ENST00000368686 GAS2L2Q8NHY3 880 aa22.19■■□□□ 1.14
CHTOP-201ENST00000368686 DDX19BQ9UMR2 479 aa22.19■■□□□ 1.14
CHTOP-201ENST00000368686 CEP152O94986 1710 aa22.19■■□□□ 1.14
CHTOP-201ENST00000368686 CCDC27Q2M243 656 aa22.18■■□□□ 1.14
CHTOP-201ENST00000368686 NUCB2P80303 420 aa22.18■■□□□ 1.14
CHTOP-201ENST00000368686 LETM1O95202 739 aaPredicted RBP22.17■■□□□ 1.14
CHTOP-201ENST00000368686 PRIM1P49642 420 aaKnown RBP22.17■■□□□ 1.14
CHTOP-201ENST00000368686 PDE4CQ08493 712 aa22.17■■□□□ 1.14
CHTOP-201ENST00000368686 KIF16BQ96L93 1317 aa22.17■■□□□ 1.14
CHTOP-201ENST00000368686 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
CHTOP-201ENST00000368686 CT47B1P0C2W7 299 aaPredicted RBP22.17■■□□□ 1.14
CHTOP-201ENST00000368686 BMP2KLQ5H9B9 411 aa22.17■■□□□ 1.14
CHTOP-201ENST00000368686 MCTP1Q6DN14 999 aa22.17■■□□□ 1.14
CHTOP-201ENST00000368686 LMBRD1Q9NUN5 540 aa22.17■■□□□ 1.14
CHTOP-201ENST00000368686 NEUROD2Q15784 382 aa22.16■■□□□ 1.14
CHTOP-201ENST00000368686 NUCB1Q02818 461 aa22.15■■□□□ 1.14
CHTOP-201ENST00000368686 TCP11L2Q8N4U5 519 aa22.15■■□□□ 1.14
CHTOP-201ENST00000368686 PRIMPOLQ96LW4 560 aa22.15■■□□□ 1.14
CHTOP-201ENST00000368686 KIAA2012Q0VF49 1180 aa22.14■■□□□ 1.14
CHTOP-201ENST00000368686 PPP4R3BQ5MIZ7 849 aa22.14■■□□□ 1.14
CHTOP-201ENST00000368686 MAGI1Q96QZ7 1491 aaPredicted RBP22.14■■□□□ 1.13
CHTOP-201ENST00000368686 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
CHTOP-201ENST00000368686 RRP7AQ9Y3A4 280 aaKnown RBP22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms