RNA–Protein interactions for RNA: ENST00000368640.8

LAMA4-204, Transcript of laminin subunit alpha 4, humanhuman

TSL 3

Gene LAMA4, Length 672 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-204ENST00000368640 KNDC1Q76NI1 1749 aa16.53■□□□□ 0.24
LAMA4-204ENST00000368640 ABCC11Q96J66 1382 aa16.52■□□□□ 0.24
LAMA4-204ENST00000368640 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
LAMA4-204ENST00000368640 ADGRB1O14514 1584 aa16.51■□□□□ 0.23
LAMA4-204ENST00000368640 STRCP1A6NGW2 1772 aa16.51■□□□□ 0.23
LAMA4-204ENST00000368640 EIF4G2P78344 907 aaKnown RBP eCLIP16.51■□□□□ 0.23
LAMA4-204ENST00000368640 SIRT1Q96EB6 747 aa16.51■□□□□ 0.23
LAMA4-204ENST00000368640 AMOTL2Q9Y2J4 779 aa16.51■□□□□ 0.23
LAMA4-204ENST00000368640 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
LAMA4-204ENST00000368640 METP08581 1390 aa16.51■□□□□ 0.23
LAMA4-204ENST00000368640 DLC1Q96QB1 1528 aa16.5■□□□□ 0.23
LAMA4-204ENST00000368640 TMEM132EQ6IEE7 984 aa16.5■□□□□ 0.23
LAMA4-204ENST00000368640 POGKQ9P215 609 aa16.5■□□□□ 0.23
LAMA4-204ENST00000368640 NWD1Q149M9 1564 aa16.5■□□□□ 0.23
LAMA4-204ENST00000368640 TECPR2O15040 1411 aa16.49■□□□□ 0.23
LAMA4-204ENST00000368640 PTCH1Q13635 1447 aa16.49■□□□□ 0.23
LAMA4-204ENST00000368640 NBPF1Q3BBV0 1214 aa16.49■□□□□ 0.23
LAMA4-204ENST00000368640 STK26Q9P289 416 aa16.49■□□□□ 0.23
LAMA4-204ENST00000368640 TRAK1Q9UPV9 953 aa16.49■□□□□ 0.23
LAMA4-204ENST00000368640 XRN1Q8IZH2 1706 aaKnown RBP16.48■□□□□ 0.23
LAMA4-204ENST00000368640 USP47Q96K76 1375 aa16.47■□□□□ 0.23
LAMA4-204ENST00000368640 ASXL1Q8IXJ9 1541 aa16.46■□□□□ 0.23
LAMA4-204ENST00000368640 CENPJQ9HC77 1338 aaPredicted RBP16.45■□□□□ 0.22
LAMA4-204ENST00000368640 NCOA3Q9Y6Q9 1424 aa16.45■□□□□ 0.22
LAMA4-204ENST00000368640 ARHGEF28Q8N1W1 1705 aaKnown RBP16.45■□□□□ 0.22
LAMA4-204ENST00000368640 C14orf37Q86TY3 774 aa16.45■□□□□ 0.22
LAMA4-204ENST00000368640 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
LAMA4-204ENST00000368640 CDCA8Q53HL2 280 aa16.43■□□□□ 0.22
LAMA4-204ENST00000368640 TMEM94Q12767 1356 aa16.42■□□□□ 0.22
LAMA4-204ENST00000368640 PRAM1Q96QH2 718 aa16.42■□□□□ 0.22
LAMA4-204ENST00000368640 PTPRUQ92729 1446 aa16.42■□□□□ 0.22
LAMA4-204ENST00000368640 SBNO2Q9Y2G9 1366 aa16.41■□□□□ 0.22
LAMA4-204ENST00000368640 QRICH2Q9H0J4 1663 aa16.4■□□□□ 0.22
LAMA4-204ENST00000368640 UPF1Q92900 1129 aaKnown RBP eCLIP16.4■□□□□ 0.22
LAMA4-204ENST00000368640 TMF1P82094 1093 aa16.39■□□□□ 0.21
LAMA4-204ENST00000368640 RBM33Q96EV2 1170 aaKnown RBP16.39■□□□□ 0.21
LAMA4-204ENST00000368640 MSH6P52701 1360 aa16.38■□□□□ 0.21
LAMA4-204ENST00000368640 ROBO2Q9HCK4 1378 aa16.38■□□□□ 0.21
LAMA4-204ENST00000368640 ST20-MTHFSA0A0A6YYL1 179 aa16.38■□□□□ 0.21
LAMA4-204ENST00000368640 EVC2Q86UK5 1308 aa16.38■□□□□ 0.21
LAMA4-204ENST00000368640 HSPA5P11021 654 aaKnown RBP16.37■□□□□ 0.21
LAMA4-204ENST00000368640 C19orf44Q9H6X5 657 aa16.36■□□□□ 0.21
LAMA4-204ENST00000368640 JCADQ9P266 1359 aa16.36■□□□□ 0.21
LAMA4-204ENST00000368640 DCCP43146 1447 aa16.36■□□□□ 0.21
LAMA4-204ENST00000368640 ADGRL3Q9HAR2 1447 aa16.36■□□□□ 0.21
LAMA4-204ENST00000368640 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
LAMA4-204ENST00000368640 ATF3P18847 181 aa16.35■□□□□ 0.21
LAMA4-204ENST00000368640 SAFB2Q14151 953 aaKnown RBP eCLIP16.35■□□□□ 0.21
LAMA4-204ENST00000368640 WAPLQ7Z5K2 1190 aa16.35■□□□□ 0.21
LAMA4-204ENST00000368640 CADPS2Q86UW7 1296 aa16.35■□□□□ 0.21
LAMA4-204ENST00000368640 SLAIN2Q9P270 581 aa16.35■□□□□ 0.21
LAMA4-204ENST00000368640 ADGRB2O60241 1585 aa16.34■□□□□ 0.21
LAMA4-204ENST00000368640 XIRP1Q702N8 1843 aaKnown RBP16.34■□□□□ 0.21
LAMA4-204ENST00000368640 ZNF772Q68DY9 489 aaPredicted RBP16.33■□□□□ 0.2
LAMA4-204ENST00000368640 PUS7Q96PZ0 661 aaKnown RBP16.33■□□□□ 0.2
LAMA4-204ENST00000368640 MINK1Q8N4C8 1332 aaPredicted RBP16.33■□□□□ 0.2
LAMA4-204ENST00000368640 CDC42BPGQ6DT37 1551 aa16.33■□□□□ 0.2
LAMA4-204ENST00000368640 ROBO1Q9Y6N7 1651 aa16.33■□□□□ 0.2
LAMA4-204ENST00000368640 SRPK2P78362 688 aaKnown RBP16.32■□□□□ 0.2
LAMA4-204ENST00000368640 MEX3CQ5U5Q3 659 aaKnown RBP16.32■□□□□ 0.2
LAMA4-204ENST00000368640 NALCNQ8IZF0 1738 aa16.31■□□□□ 0.2
LAMA4-204ENST00000368640 ATAD2Q6PL18 1390 aa16.3■□□□□ 0.2
LAMA4-204ENST00000368640 PLEKHH1Q9ULM0 1364 aa16.3■□□□□ 0.2
LAMA4-204ENST00000368640 WASLO00401 505 aaPredicted RBP16.3■□□□□ 0.2
LAMA4-204ENST00000368640 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.29■□□□□ 0.2
LAMA4-204ENST00000368640 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
LAMA4-204ENST00000368640 NINLQ9Y2I6 1382 aa16.28■□□□□ 0.2
LAMA4-204ENST00000368640 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
LAMA4-204ENST00000368640 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
LAMA4-204ENST00000368640 RXRBP28702 533 aa16.28■□□□□ 0.2
LAMA4-204ENST00000368640 TESK2Q96S53 571 aa16.28■□□□□ 0.2
LAMA4-204ENST00000368640 HIRIP3Q9BW71 556 aaPredicted RBP16.28■□□□□ 0.2
LAMA4-204ENST00000368640 ANKARQ7Z5J8 1434 aa16.28■□□□□ 0.2
LAMA4-204ENST00000368640 CDK19Q9BWU1 502 aa16.27■□□□□ 0.2
LAMA4-204ENST00000368640 TULP4Q9NRJ4 1543 aa16.27■□□□□ 0.2
LAMA4-204ENST00000368640 FMN2Q9NZ56 1722 aa16.25■□□□□ 0.19
LAMA4-204ENST00000368640 ZNF316A6NFI3 1004 aaPredicted RBP16.25■□□□□ 0.19
LAMA4-204ENST00000368640 ABCB7O75027 752 aa16.25■□□□□ 0.19
LAMA4-204ENST00000368640 POLR3GLQ9BT43 218 aa16.24■□□□□ 0.19
LAMA4-204ENST00000368640 CCDC61Q9Y6R9 512 aa16.24■□□□□ 0.19
LAMA4-204ENST00000368640 PHLPP1O60346 1717 aa16.23■□□□□ 0.19
LAMA4-204ENST00000368640 LRP6O75581 1613 aa16.22■□□□□ 0.19
LAMA4-204ENST00000368640 NUDT16Q96DE0 195 aaKnown RBP16.21■□□□□ 0.19
LAMA4-204ENST00000368640 CABP2Q9NPB3 220 aa16.21■□□□□ 0.19
LAMA4-204ENST00000368640 TERF2IPQ9NYB0 399 aa16.21■□□□□ 0.19
LAMA4-204ENST00000368640 KIF1AQ12756 1690 aa16.21■□□□□ 0.18
LAMA4-204ENST00000368640 HDGFL2Q7Z4V5 671 aaPredicted RBP16.2■□□□□ 0.18
LAMA4-204ENST00000368640 TMC1Q8TDI8 760 aa16.2■□□□□ 0.18
LAMA4-204ENST00000368640 ATP7BP35670 1465 aa16.18■□□□□ 0.18
LAMA4-204ENST00000368640 C1orf167Q5SNV9 1468 aa16.18■□□□□ 0.18
LAMA4-204ENST00000368640 CCDC7Q96M83 1385 aa16.18■□□□□ 0.18
LAMA4-204ENST00000368640 NUTM2BA6NNL0 878 aaPredicted RBP16.18■□□□□ 0.18
LAMA4-204ENST00000368640 NUTM2EB1AL46 878 aaPredicted RBP16.18■□□□□ 0.18
LAMA4-204ENST00000368640 ESCO1Q5FWF5 840 aa16.18■□□□□ 0.18
LAMA4-204ENST00000368640 NUTM2AQ8IVF1 878 aaPredicted RBP16.18■□□□□ 0.18
LAMA4-204ENST00000368640 ZNF692Q9BU19 519 aaPredicted RBP16.18■□□□□ 0.18
LAMA4-204ENST00000368640 MST1RQ04912 1400 aa16.18■□□□□ 0.18
LAMA4-204ENST00000368640 PPIP5K1Q6PFW1 1433 aa16.18■□□□□ 0.18
LAMA4-204ENST00000368640 COL16A1Q07092 1604 aaPredicted RBP16.17■□□□□ 0.18
LAMA4-204ENST00000368640 NUTM2FA1L443 756 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms