RNA–Protein interactions for RNA: ENST00000368311.5

SSR2-202, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 1 (best)

Gene SSR2, Length 5,166 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-202ENST00000368311 FAM9BQ8IZU0 186 aa10.55□□□□□ -0.72
SSR2-202ENST00000368311 PUS7Q96PZ0 661 aaKnown RBP10.54□□□□□ -0.72
SSR2-202ENST00000368311 TEX13AQ9BXU3 409 aaPredicted RBP10.54□□□□□ -0.72
SSR2-202ENST00000368311 NCKAP5LQ9HCH0 1330 aa10.54□□□□□ -0.72
SSR2-202ENST00000368311 AMOTQ4VCS5 1084 aa10.54□□□□□ -0.72
SSR2-202ENST00000368311 SIRT1Q96EB6 747 aa10.54□□□□□ -0.72
SSR2-202ENST00000368311 HSPA5P11021 654 aaKnown RBP10.54□□□□□ -0.72
SSR2-202ENST00000368311 BAG6P46379 1132 aa10.54□□□□□ -0.72
SSR2-202ENST00000368311 DDRGK1Q96HY6 314 aa10.54□□□□□ -0.72
SSR2-202ENST00000368311 ZNF330Q9Y3S2 320 aaPredicted RBP10.54□□□□□ -0.72
SSR2-202ENST00000368311 SHROOM2Q13796 1616 aa10.54□□□□□ -0.72
SSR2-202ENST00000368311 USP47Q96K76 1375 aa10.53□□□□□ -0.72
SSR2-202ENST00000368311 HMMRO75330 724 aa10.53□□□□□ -0.72
SSR2-202ENST00000368311 RBM33Q96EV2 1170 aaKnown RBP10.53□□□□□ -0.72
SSR2-202ENST00000368311 NSD2O96028 1365 aa10.53□□□□□ -0.72
SSR2-202ENST00000368311 EIF2AK4Q9P2K8 1649 aaKnown RBP10.53□□□□□ -0.72
SSR2-202ENST00000368311 EXOC5O00471 708 aa10.53□□□□□ -0.72
SSR2-202ENST00000368311 IDI1Q13907 227 aa10.53□□□□□ -0.72
SSR2-202ENST00000368311 SIN3AQ96ST3 1273 aa10.53□□□□□ -0.72
SSR2-202ENST00000368311 CCDC7Q96M83 1385 aa10.53□□□□□ -0.72
SSR2-202ENST00000368311 KLHL34Q8N239 644 aa10.52□□□□□ -0.73
SSR2-202ENST00000368311 CHMP4CQ96CF2 233 aa10.52□□□□□ -0.73
SSR2-202ENST00000368311 MAST1Q9Y2H9 1570 aa10.52□□□□□ -0.73
SSR2-202ENST00000368311 NUDT16Q96DE0 195 aaKnown RBP10.51□□□□□ -0.73
SSR2-202ENST00000368311 TRIM34Q9BYJ4 488 aa10.51□□□□□ -0.73
SSR2-202ENST00000368311 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.51□□□□□ -0.73
SSR2-202ENST00000368311 ABCC1P33527 1531 aa10.51□□□□□ -0.73
SSR2-202ENST00000368311 WASLO00401 505 aaPredicted RBP10.51□□□□□ -0.73
SSR2-202ENST00000368311 A2ML1A8K2U0 1454 aa10.5□□□□□ -0.73
SSR2-202ENST00000368311 ADGRL2O95490 1459 aa10.5□□□□□ -0.73
SSR2-202ENST00000368311 GORABQ5T7V8 394 aa10.5□□□□□ -0.73
SSR2-202ENST00000368311 KDM5CP41229 1560 aa10.5□□□□□ -0.73
SSR2-202ENST00000368311 CERKQ8TCT0 537 aa10.5□□□□□ -0.73
SSR2-202ENST00000368311 TMEM2Q9UHN6 1383 aa10.5□□□□□ -0.73
SSR2-202ENST00000368311 PLEKHG1Q9ULL1 1385 aa10.5□□□□□ -0.73
SSR2-202ENST00000368311 HNRNPUQ00839 825 aaKnown RBP eCLIP10.5□□□□□ -0.73
SSR2-202ENST00000368311 ABCA9Q8IUA7 1624 aa10.49□□□□□ -0.73
SSR2-202ENST00000368311 CABP4P57796 275 aa10.49□□□□□ -0.73
SSR2-202ENST00000368311 SCAF11Q99590 1463 aaKnown RBP10.49□□□□□ -0.73
SSR2-202ENST00000368311 FBXO31Q5XUX0 539 aaPredicted RBP10.49□□□□□ -0.73
SSR2-202ENST00000368311 KCNJ4P48050 445 aa10.49□□□□□ -0.73
SSR2-202ENST00000368311 C14orf93Q9H972 538 aaKnown RBP10.49□□□□□ -0.73
SSR2-202ENST00000368311 PREX2Q70Z35 1606 aa10.49□□□□□ -0.73
SSR2-202ENST00000368311 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
SSR2-202ENST00000368311 TTC21BQ7Z4L5 1316 aa10.48□□□□□ -0.73
SSR2-202ENST00000368311 STARD3NLO95772 234 aa10.48□□□□□ -0.73
SSR2-202ENST00000368311 ADGBQ8N7X0 1667 aa10.48□□□□□ -0.73
SSR2-202ENST00000368311 HIRIP3Q9BW71 556 aaPredicted RBP10.48□□□□□ -0.73
SSR2-202ENST00000368311 EFCAB6Q5THR3 1501 aa10.48□□□□□ -0.73
SSR2-202ENST00000368311 STK32BQ9NY57 414 aa10.48□□□□□ -0.73
SSR2-202ENST00000368311 AGLP35573 1532 aa10.48□□□□□ -0.73
SSR2-202ENST00000368311 NKTRP30414 1462 aaKnown RBP10.48□□□□□ -0.73
SSR2-202ENST00000368311 FLAD1Q8NFF5 587 aa10.48□□□□□ -0.73
SSR2-202ENST00000368311 TRPC5Q9UL62 973 aaPredicted RBP10.48□□□□□ -0.73
SSR2-202ENST00000368311 TSPOAP1O95153 1857 aa10.47□□□□□ -0.73
SSR2-202ENST00000368311 HSPA2P54652 639 aa10.47□□□□□ -0.73
SSR2-202ENST00000368311 FRAT2O75474 233 aaPredicted RBP10.47□□□□□ -0.73
SSR2-202ENST00000368311 CFAP70Q5T0N1 1121 aa10.47□□□□□ -0.73
SSR2-202ENST00000368311 DNMT1P26358 1616 aaKnown RBP10.47□□□□□ -0.73
SSR2-202ENST00000368311 ADAMTS2O95450 1211 aa10.46□□□□□ -0.73
SSR2-202ENST00000368311 HSP90AB3PQ58FF7 597 aa10.46□□□□□ -0.73
SSR2-202ENST00000368311 MYBBP1AQ9BQG0 1328 aaKnown RBP10.46□□□□□ -0.74
SSR2-202ENST00000368311 C16orf71Q8IYS4 520 aaPredicted RBP10.46□□□□□ -0.74
SSR2-202ENST00000368311 PIK3C2GO75747 1445 aa10.46□□□□□ -0.74
SSR2-202ENST00000368311 CCER2I3L3R5 266 aa10.45□□□□□ -0.74
SSR2-202ENST00000368311 GNAI1P63096 354 aa10.45□□□□□ -0.74
SSR2-202ENST00000368311 PZPP20742 1482 aa10.45□□□□□ -0.74
SSR2-202ENST00000368311 PRKCSHP14314 528 aaPredicted RBP10.45□□□□□ -0.74
SSR2-202ENST00000368311 NOS1P29475 1434 aa10.45□□□□□ -0.74
SSR2-202ENST00000368311 CWC22Q9HCG8 908 aaKnown RBP10.45□□□□□ -0.74
SSR2-202ENST00000368311 TMOD3Q9NYL9 352 aa10.45□□□□□ -0.74
SSR2-202ENST00000368311 CTDP1Q9Y5B0 961 aaPredicted RBP10.45□□□□□ -0.74
SSR2-202ENST00000368311 PMFBP1Q8TBY8 1022 aa10.45□□□□□ -0.74
SSR2-202ENST00000368311 RXRBP28702 533 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 SAMD9LQ8IVG5 1584 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 ZPR1O75312 459 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 CDK11BP21127 795 aaKnown RBP10.44□□□□□ -0.74
SSR2-202ENST00000368311 AK7Q96M32 723 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 CABP2Q9NPB3 220 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 ARHGEF40Q8TER5 1519 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 ST20-MTHFSA0A0A6YYL1 179 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 C8orf37Q96NL8 207 aa10.44□□□□□ -0.74
SSR2-202ENST00000368311 BCL11BQ9C0K0 894 aaPredicted RBP10.44□□□□□ -0.74
SSR2-202ENST00000368311 PPIP5K1Q6PFW1 1433 aa10.43□□□□□ -0.74
SSR2-202ENST00000368311 MCCP23508 829 aa10.43□□□□□ -0.74
SSR2-202ENST00000368311 ADCY10Q96PN6 1610 aa10.43□□□□□ -0.74
SSR2-202ENST00000368311 TMEM132EQ6IEE7 984 aa10.43□□□□□ -0.74
SSR2-202ENST00000368311 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
SSR2-202ENST00000368311 NAIPQ13075 1403 aa10.42□□□□□ -0.74
SSR2-202ENST00000368311 ARHGAP31Q2M1Z3 1444 aa10.42□□□□□ -0.74
SSR2-202ENST00000368311 HSP90AB4PQ58FF6 505 aa10.42□□□□□ -0.74
SSR2-202ENST00000368311 NEUROD2Q15784 382 aa10.42□□□□□ -0.74
SSR2-202ENST00000368311 SPATA31A6Q5VVP1 1343 aa10.42□□□□□ -0.74
SSR2-202ENST00000368311 HSP90AA1P07900 732 aaKnown RBP10.42□□□□□ -0.74
SSR2-202ENST00000368311 PANK3Q9H999 370 aa10.41□□□□□ -0.74
SSR2-202ENST00000368311 DIP2BQ9P265 1576 aa10.41□□□□□ -0.74
SSR2-202ENST00000368311 GNL3LQ9NVN8 582 aaKnown RBP10.41□□□□□ -0.74
SSR2-202ENST00000368311 FBXO41Q8TF61 875 aa10.41□□□□□ -0.74
SSR2-202ENST00000368311 ZRANB1Q9UGI0 708 aa10.41□□□□□ -0.74
SSR2-202ENST00000368311 VPS37DQ86XT2 251 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms