RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 TRDNQ13061 729 aa8.59□□□□□ -1.03
SPTA1-201ENST00000368147 TTLL12Q14166 644 aaPredicted RBP8.59□□□□□ -1.03
SPTA1-201ENST00000368147 GPRASP1Q5JY77 1395 aa8.59□□□□□ -1.03
SPTA1-201ENST00000368147 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
SPTA1-201ENST00000368147 CABP4P57796 275 aa8.59□□□□□ -1.03
SPTA1-201ENST00000368147 DNAJC2Q99543 621 aaKnown RBP8.59□□□□□ -1.03
SPTA1-201ENST00000368147 CNNM1Q9NRU3 951 aa8.59□□□□□ -1.03
SPTA1-201ENST00000368147 R3HCC1Q9Y3T6 440 aaKnown RBP8.59□□□□□ -1.03
SPTA1-201ENST00000368147 WWC2Q6AWC2 1192 aa8.59□□□□□ -1.04
SPTA1-201ENST00000368147 CADPSQ9ULU8 1353 aa8.58□□□□□ -1.04
SPTA1-201ENST00000368147 PPM1FP49593 454 aaPredicted RBP8.58□□□□□ -1.04
SPTA1-201ENST00000368147 ZSCAN29Q8IWY8 852 aaPredicted RBP8.58□□□□□ -1.04
SPTA1-201ENST00000368147 CPLX1O14810 134 aa8.58□□□□□ -1.04
SPTA1-201ENST00000368147 FAM161AQ3B820 660 aa8.58□□□□□ -1.04
SPTA1-201ENST00000368147 DYDC1Q8WWB3 177 aa8.58□□□□□ -1.04
SPTA1-201ENST00000368147 VSIG10Q8N0Z9 540 aa8.58□□□□□ -1.04
SPTA1-201ENST00000368147 INCENPQ9NQS7 918 aa8.58□□□□□ -1.04
SPTA1-201ENST00000368147 ST18O60284 1047 aa8.58□□□□□ -1.04
SPTA1-201ENST00000368147 CAGE1Q8TC20 777 aa8.57□□□□□ -1.04
SPTA1-201ENST00000368147 ZNF644Q9H582 1327 aaPredicted RBP8.57□□□□□ -1.04
SPTA1-201ENST00000368147 NAP1L1P55209 391 aaKnown RBP8.57□□□□□ -1.04
SPTA1-201ENST00000368147 CCDC85AQ96PX6 553 aaPredicted RBP8.57□□□□□ -1.04
SPTA1-201ENST00000368147 SLC26A8Q96RN1 970 aa8.57□□□□□ -1.04
SPTA1-201ENST00000368147 AK7Q96M32 723 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 LRRFIP1Q32MZ4 808 aaKnown RBP8.56□□□□□ -1.04
SPTA1-201ENST00000368147 TOP2AP11388 1531 aaKnown RBP8.56□□□□□ -1.04
SPTA1-201ENST00000368147 SMARCA4P51532 1647 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 MAP4K4O95819 1239 aaPredicted RBP8.56□□□□□ -1.04
SPTA1-201ENST00000368147 EPS15P42566 896 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 ODF2Q5BJF6 829 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 COG6Q9Y2V7 657 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 GAPVD1Q14C86 1478 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 SPDYE4A6NLX3 237 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 SIL1Q9H173 461 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 PIBF1Q8WXW3 757 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 ACBD3Q9H3P7 528 aa8.56□□□□□ -1.04
SPTA1-201ENST00000368147 MPHOSPH10O00566 681 aaKnown RBP8.55□□□□□ -1.04
SPTA1-201ENST00000368147 TTC39AQ5SRH9 613 aa8.55□□□□□ -1.04
SPTA1-201ENST00000368147 ZC3H6P61129 1189 aaKnown RBP8.55□□□□□ -1.04
SPTA1-201ENST00000368147 CT47A1Q5JQC4 288 aaPredicted RBP8.55□□□□□ -1.04
SPTA1-201ENST00000368147 RSPH4AQ5TD94 716 aa8.55□□□□□ -1.04
SPTA1-201ENST00000368147 SMG6Q86US8 1419 aaKnown RBP8.55□□□□□ -1.04
SPTA1-201ENST00000368147 APAF1O14727 1248 aa8.55□□□□□ -1.04
SPTA1-201ENST00000368147 VPS8Q8N3P4 1428 aa8.55□□□□□ -1.04
SPTA1-201ENST00000368147 MATR3P43243 847 aaKnown RBP eCLIP8.55□□□□□ -1.04
SPTA1-201ENST00000368147 PLCD3Q8N3E9 789 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 DHX57Q6P158 1386 aaKnown RBP8.54□□□□□ -1.04
SPTA1-201ENST00000368147 KIF15Q9NS87 1388 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 PRAM1Q96QH2 718 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 TATP17735 454 aaPredicted RBP8.54□□□□□ -1.04
SPTA1-201ENST00000368147 AFAP1Q8N556 730 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 GOLGA6L19H0YKK7 550 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 TPM1P09493 284 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 ZNF592Q92610 1267 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 KIF3AQ9Y496 699 aa8.54□□□□□ -1.04
SPTA1-201ENST00000368147 ATP2B1P20020 1258 aa8.53□□□□□ -1.04
SPTA1-201ENST00000368147 WASHC2AQ641Q2 1341 aa8.53□□□□□ -1.04
SPTA1-201ENST00000368147 RAPGEF3O95398 923 aa8.53□□□□□ -1.04
SPTA1-201ENST00000368147 CRBNQ96SW2 442 aa8.53□□□□□ -1.04
SPTA1-201ENST00000368147 SKIDA1Q1XH10 827 aa8.53□□□□□ -1.04
SPTA1-201ENST00000368147 RUFY1Q96T51 708 aa8.53□□□□□ -1.04
SPTA1-201ENST00000368147 NGLY1Q96IV0 654 aa8.52□□□□□ -1.05
SPTA1-201ENST00000368147 CCDC66A2RUB6 948 aa8.52□□□□□ -1.05
SPTA1-201ENST00000368147 ZKSCAN2Q63HK3 967 aa8.52□□□□□ -1.05
SPTA1-201ENST00000368147 TTLL5Q6EMB2 1281 aa8.52□□□□□ -1.05
SPTA1-201ENST00000368147 MTERF4Q7Z6M4 381 aaKnown RBP8.52□□□□□ -1.05
SPTA1-201ENST00000368147 CCDC47Q96A33 483 aaKnown RBP8.52□□□□□ -1.05
SPTA1-201ENST00000368147 MTHFSP49914 203 aa8.52□□□□□ -1.05
SPTA1-201ENST00000368147 WDR78Q5VTH9 848 aa8.52□□□□□ -1.05
SPTA1-201ENST00000368147 RUFY2Q8WXA3 655 aa8.52□□□□□ -1.05
SPTA1-201ENST00000368147 CPLX2Q6PUV4 134 aaKnown RBP8.51□□□□□ -1.05
SPTA1-201ENST00000368147 RALYLQ86SE5 291 aaKnown RBP8.51□□□□□ -1.05
SPTA1-201ENST00000368147 ANKLE2Q86XL3 938 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 ZHX3Q9H4I2 956 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 C1orf115Q9H7X2 142 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 PRDM11Q9NQV5 511 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 RUSC2Q8N2Y8 1516 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 VPS37CA5D8V6 355 aaPredicted RBP8.51□□□□□ -1.05
SPTA1-201ENST00000368147 CA8P35219 290 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 FGD5Q6ZNL6 1462 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 BECN2A8MW95 431 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 MYO6Q9UM54 1294 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 HSP90AB2PQ58FF8 381 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 CDK19Q9BWU1 502 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 SLC4A8Q2Y0W8 1093 aa8.51□□□□□ -1.05
SPTA1-201ENST00000368147 MYBBP1AQ9BQG0 1328 aaKnown RBP8.5□□□□□ -1.05
SPTA1-201ENST00000368147 HMGB1P09429 215 aaKnown RBP8.5□□□□□ -1.05
SPTA1-201ENST00000368147 UBTFL1P0CB47 393 aaPredicted RBP8.5□□□□□ -1.05
SPTA1-201ENST00000368147 BICD2Q8TD16 824 aa8.5□□□□□ -1.05
SPTA1-201ENST00000368147 PLEKHO1Q53GL0 409 aaPredicted RBP8.5□□□□□ -1.05
SPTA1-201ENST00000368147 USP47Q96K76 1375 aa8.5□□□□□ -1.05
SPTA1-201ENST00000368147 DEKP35659 375 aaKnown RBP8.5□□□□□ -1.05
SPTA1-201ENST00000368147 NLRP13Q86W25 1043 aa8.5□□□□□ -1.05
SPTA1-201ENST00000368147 H0YHG0 523 aa8.5□□□□□ -1.05
SPTA1-201ENST00000368147 ZKSCAN1P17029 563 aaPredicted RBP8.5□□□□□ -1.05
SPTA1-201ENST00000368147 TBC1D2BQ9UPU7 963 aa8.5□□□□□ -1.05
SPTA1-201ENST00000368147 THEMISQ8N1K5 641 aaPredicted RBP8.5□□□□□ -1.05
SPTA1-201ENST00000368147 RRS1Q15050 365 aaKnown RBP8.49□□□□□ -1.05
SPTA1-201ENST00000368147 ZPR1O75312 459 aa8.49□□□□□ -1.05
SPTA1-201ENST00000368147 GOLGA6L7A0A1B0GV03 622 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms