RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 PUS7Q96PZ0 661 aaKnown RBP4.55□□□□□ -1.68
SYNE1-207ENST00000367255 NBPF7P0C2Y1 421 aaPredicted RBP4.55□□□□□ -1.68
SYNE1-207ENST00000367255 FBXW7Q969H0 707 aa4.55□□□□□ -1.68
SYNE1-207ENST00000367255 CCDC9Q9Y3X0 531 aaKnown RBP4.55□□□□□ -1.68
SYNE1-207ENST00000367255 SPAG9O60271 1321 aaKnown RBP4.55□□□□□ -1.68
SYNE1-207ENST00000367255 CROCCP2Q86T23 111 aa4.55□□□□□ -1.68
SYNE1-207ENST00000367255 HOOK3Q86VS8 718 aa4.55□□□□□ -1.68
SYNE1-207ENST00000367255 DAPK1P53355 1430 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 TSPY4P0CV99 314 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 TSPY10P0CW01 314 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 PDE3AQ14432 1141 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 NOL8Q76FK4 1167 aaKnown RBP4.54□□□□□ -1.68
SYNE1-207ENST00000367255 CLUL1Q15846 466 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 TAF7LQ5H9L4 462 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 LUC7LQ9NQ29 371 aaKnown RBP4.54□□□□□ -1.68
SYNE1-207ENST00000367255 FHOD3Q2V2M9 1422 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 RAD50Q92878 1312 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 PIK3R5Q8WYR1 880 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 PRDM10Q9NQV6 1147 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 EHBP1Q8NDI1 1231 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 ERICH3Q5RHP9 1530 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 NEXNQ0ZGT2 675 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 IBTKQ9P2D0 1353 aaPredicted RBP4.54□□□□□ -1.68
SYNE1-207ENST00000367255 CEP120Q8N960 986 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 CCDC102AQ96A19 550 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 IVLP07476 585 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 C10orf67Q8IYJ2 551 aa4.54□□□□□ -1.68
SYNE1-207ENST00000367255 HSP90AB4PQ58FF6 505 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 CAMSAP2Q08AD1 1489 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 IGSF3O75054 1194 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 IBSPP21815 317 aaPredicted RBP4.53□□□□□ -1.68
SYNE1-207ENST00000367255 ARMC9Q7Z3E5 817 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 SH2D4BQ5SQS7 431 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 SMG6Q86US8 1419 aaKnown RBP4.53□□□□□ -1.68
SYNE1-207ENST00000367255 RGS22Q8NE09 1264 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 A0A0G2JS52 829 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 EIF3JO75822 258 aaKnown RBP4.53□□□□□ -1.68
SYNE1-207ENST00000367255 CHMP5Q9NZZ3 219 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 ATL3Q6DD88 541 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 NDC80O14777 642 aa4.53□□□□□ -1.68
SYNE1-207ENST00000367255 FAM161AQ3B820 660 aa4.53□□□□□ -1.69
SYNE1-207ENST00000367255 MICALCLQ6ZW33 695 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 ERLIN1O75477 346 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 TAX1BP1Q86VP1 789 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 ISM2Q6H9L7 571 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 ANKRD20A12PQ8NF67 263 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 PAXBP1Q9Y5B6 917 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 MNAT1P51948 309 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 TRDNQ13061 729 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 DNAJC2Q99543 621 aaKnown RBP4.52□□□□□ -1.69
SYNE1-207ENST00000367255 PSMD1Q99460 953 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 MAP9Q49MG5 647 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 ABCC9O60706 1549 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 SWAP70Q9UH65 585 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 ARHGAP35Q9NRY4 1499 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 CCDC171Q6TFL3 1326 aa4.52□□□□□ -1.69
SYNE1-207ENST00000367255 TSC1Q92574 1164 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 HIP1O00291 1037 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 LIG1P18858 919 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 MFAP1P55081 439 aaKnown RBP4.51□□□□□ -1.69
SYNE1-207ENST00000367255 EXOC6Q8TAG9 804 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 USP25Q9UHP3 1055 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 CCDC191Q8NCU4 936 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 CCDC184Q52MB2 194 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 CEP128Q6ZU80 1094 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 ERCC3P19447 782 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 DTNBO60941 627 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 TRHP20396 242 aaPredicted RBP4.51□□□□□ -1.69
SYNE1-207ENST00000367255 SOX12O15370 315 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 CUX2O14529 1486 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 SOGA1O94964 1423 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 MIPOL1Q8TD10 442 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 CTAGE5O15320 804 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 SMARCA2P51531 1590 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 DNAJC21Q5F1R6 531 aaKnown RBP4.51□□□□□ -1.69
SYNE1-207ENST00000367255 TTLL5Q6EMB2 1281 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 ZC3H15Q8WU90 426 aaKnown RBP4.51□□□□□ -1.69
SYNE1-207ENST00000367255 GDAP1L1Q96MZ0 367 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 DHX16O60231 1041 aaKnown RBP4.51□□□□□ -1.69
SYNE1-207ENST00000367255 HOXC8P31273 242 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 GIMAP7Q8NHV1 300 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 STK11IPQ8N1F8 1099 aa4.51□□□□□ -1.69
SYNE1-207ENST00000367255 FTSJ3Q8IY81 847 aaKnown RBP4.5□□□□□ -1.69
SYNE1-207ENST00000367255 KIAA1328Q86T90 577 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 AQRO60306 1485 aaKnown RBP eCLIP4.5□□□□□ -1.69
SYNE1-207ENST00000367255 TMED1Q13445 227 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 POLE3Q9NRF9 147 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 TMF1P82094 1093 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 SEMA3FQ13275 785 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.5□□□□□ -1.69
SYNE1-207ENST00000367255 RRP7AQ9Y3A4 280 aaKnown RBP4.5□□□□□ -1.69
SYNE1-207ENST00000367255 MOV10L1Q9BXT6 1211 aaKnown RBP4.5□□□□□ -1.69
SYNE1-207ENST00000367255 P3H4Q92791 437 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 ELP1O95163 1332 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 CCDC146Q8IYE0 955 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 FAM114A2Q9NRY5 505 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 CCDC83Q8IWF9 413 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 DRC7Q8IY82 874 aa4.5□□□□□ -1.69
SYNE1-207ENST00000367255 SBNO1A3KN83 1393 aa4.49□□□□□ -1.69
SYNE1-207ENST00000367255 BUB1BO60566 1050 aaPredicted RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms