RNA–Protein interactions for RNA: ENST00000366889.6

PACRG-203, Transcript of parkin coregulated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PACRG, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-203ENST00000366889 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
PACRG-203ENST00000366889 THEMISQ8N1K5 641 aaPredicted RBP12.15□□□□□ -0.46
PACRG-203ENST00000366889 PRAG1Q86YV5 1406 aa12.14□□□□□ -0.47
PACRG-203ENST00000366889 RALGAPBQ86X10 1494 aa12.13□□□□□ -0.47
PACRG-203ENST00000366889 KDM2AQ9Y2K7 1162 aa12.13□□□□□ -0.47
PACRG-203ENST00000366889 SETBP1Q9Y6X0 1596 aa12.12□□□□□ -0.47
PACRG-203ENST00000366889 MYOM2P54296 1465 aa12.11□□□□□ -0.47
PACRG-203ENST00000366889 SCAF11Q99590 1463 aaKnown RBP12.11□□□□□ -0.47
PACRG-203ENST00000366889 IFT172Q9UG01 1749 aa12.11□□□□□ -0.47
PACRG-203ENST00000366889 TMEM131LA2VDJ0 1609 aa12.11□□□□□ -0.47
PACRG-203ENST00000366889 RPGRIP1LQ68CZ1 1315 aa12.11□□□□□ -0.47
PACRG-203ENST00000366889 CHGAP10645 457 aaKnown RBP12.11□□□□□ -0.47
PACRG-203ENST00000366889 EVX2Q03828 476 aa12.11□□□□□ -0.47
PACRG-203ENST00000366889 ZBTB47Q9UFB7 747 aaPredicted RBP12.11□□□□□ -0.47
PACRG-203ENST00000366889 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
PACRG-203ENST00000366889 LTKP29376 864 aa12.1□□□□□ -0.47
PACRG-203ENST00000366889 IFNLR1Q8IU57 520 aaPredicted RBP12.1□□□□□ -0.47
PACRG-203ENST00000366889 RBM33Q96EV2 1170 aaKnown RBP12.1□□□□□ -0.47
PACRG-203ENST00000366889 TMEM94Q12767 1356 aa12.09□□□□□ -0.47
PACRG-203ENST00000366889 JCADQ9P266 1359 aa12.09□□□□□ -0.47
PACRG-203ENST00000366889 KDM5AP29375 1690 aaKnown RBP12.09□□□□□ -0.47
PACRG-203ENST00000366889 CD44P16070 742 aaKnown RBP12.09□□□□□ -0.47
PACRG-203ENST00000366889 ZNF326Q5BKZ1 582 aaKnown RBP12.09□□□□□ -0.47
PACRG-203ENST00000366889 GPRASP1Q5JY77 1395 aa12.09□□□□□ -0.47
PACRG-203ENST00000366889 ARHGAP23Q9P227 1491 aa12.08□□□□□ -0.48
PACRG-203ENST00000366889 NRXN1Q9ULB1 1477 aa12.08□□□□□ -0.48
PACRG-203ENST00000366889 EIF4G2P78344 907 aaKnown RBP eCLIP12.08□□□□□ -0.48
PACRG-203ENST00000366889 SLIT1O75093 1534 aa12.08□□□□□ -0.48
PACRG-203ENST00000366889 TMEM2Q9UHN6 1383 aa12.08□□□□□ -0.48
PACRG-203ENST00000366889 HSPA5P11021 654 aaKnown RBP12.07□□□□□ -0.48
PACRG-203ENST00000366889 TXNDC2Q86VQ3 553 aa12.07□□□□□ -0.48
PACRG-203ENST00000366889 KLHL34Q8N239 644 aa12.07□□□□□ -0.48
PACRG-203ENST00000366889 SHPRHQ149N8 1683 aa12.07□□□□□ -0.48
PACRG-203ENST00000366889 PPLO60437 1756 aa12.07□□□□□ -0.48
PACRG-203ENST00000366889 RGS12O14924 1447 aa12.07□□□□□ -0.48
PACRG-203ENST00000366889 NUTM2DQ5VT03 806 aaPredicted RBP12.06□□□□□ -0.48
PACRG-203ENST00000366889 LAMC1P11047 1609 aa12.06□□□□□ -0.48
PACRG-203ENST00000366889 CDK12Q9NYV4 1490 aaPredicted RBP12.06□□□□□ -0.48
PACRG-203ENST00000366889 ZFYVE9O95405 1425 aa12.06□□□□□ -0.48
PACRG-203ENST00000366889 NEXMIFQ5QGS0 1516 aa12.06□□□□□ -0.48
PACRG-203ENST00000366889 KIAA1210Q9ULL0 1709 aa12.06□□□□□ -0.48
PACRG-203ENST00000366889 ROCK2O75116 1388 aaKnown RBP12.05□□□□□ -0.48
PACRG-203ENST00000366889 ADGRF5Q8IZF2 1346 aa12.04□□□□□ -0.48
PACRG-203ENST00000366889 EP400Q96L91 3159 aa12.04□□□□□ -0.48
PACRG-203ENST00000366889 NBPF1Q3BBV0 1214 aa12.04□□□□□ -0.48
PACRG-203ENST00000366889 MEX3CQ5U5Q3 659 aaKnown RBP12.04□□□□□ -0.48
PACRG-203ENST00000366889 ZNF772Q68DY9 489 aaPredicted RBP12.04□□□□□ -0.48
PACRG-203ENST00000366889 CARD11Q9BXL7 1154 aa12.04□□□□□ -0.48
PACRG-203ENST00000366889 RIMS2Q9UQ26 1411 aa12.04□□□□□ -0.48
PACRG-203ENST00000366889 USP47Q96K76 1375 aa12.03□□□□□ -0.48
PACRG-203ENST00000366889 RXRBP28702 533 aa12.03□□□□□ -0.48
PACRG-203ENST00000366889 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
PACRG-203ENST00000366889 VGFO15240 615 aaPredicted RBP12.02□□□□□ -0.48
PACRG-203ENST00000366889 NUBP1P53384 320 aa12.02□□□□□ -0.48
PACRG-203ENST00000366889 RASEFQ8IZ41 740 aa12.02□□□□□ -0.48
PACRG-203ENST00000366889 HIRIP3Q9BW71 556 aaPredicted RBP12.02□□□□□ -0.48
PACRG-203ENST00000366889 PIK3C2GO75747 1445 aa12.02□□□□□ -0.49
PACRG-203ENST00000366889 NWD1Q149M9 1564 aa12.02□□□□□ -0.49
PACRG-203ENST00000366889 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
PACRG-203ENST00000366889 DIP2AQ14689 1571 aa12□□□□□ -0.49
PACRG-203ENST00000366889 SLC26A8Q96RN1 970 aa12□□□□□ -0.49
PACRG-203ENST00000366889 C14orf93Q9H972 538 aaKnown RBP12□□□□□ -0.49
PACRG-203ENST00000366889 AHDC1Q5TGY3 1603 aaPredicted RBP11.99□□□□□ -0.49
PACRG-203ENST00000366889 CFAP70Q5T0N1 1121 aa11.99□□□□□ -0.49
PACRG-203ENST00000366889 ZRANB1Q9UGI0 708 aa11.99□□□□□ -0.49
PACRG-203ENST00000366889 SPATA31A6Q5VVP1 1343 aa11.99□□□□□ -0.49
PACRG-203ENST00000366889 NKTRP30414 1462 aaKnown RBP11.98□□□□□ -0.49
PACRG-203ENST00000366889 PAK3O75914 559 aaPredicted RBP11.97□□□□□ -0.49
PACRG-203ENST00000366889 PROSER2Q86WR7 435 aaPredicted RBP11.97□□□□□ -0.49
PACRG-203ENST00000366889 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.97□□□□□ -0.49
PACRG-203ENST00000366889 BCANQ96GW7 911 aa11.97□□□□□ -0.49
PACRG-203ENST00000366889 TSPYL2Q9H2G4 693 aaPredicted RBP11.97□□□□□ -0.49
PACRG-203ENST00000366889 AFF2P51816 1311 aa11.97□□□□□ -0.49
PACRG-203ENST00000366889 PLEKHG1Q9ULL1 1385 aa11.97□□□□□ -0.49
PACRG-203ENST00000366889 ADGRB1O14514 1584 aa11.97□□□□□ -0.49
PACRG-203ENST00000366889 ST20-MTHFSA0A0A6YYL1 179 aa11.96□□□□□ -0.49
PACRG-203ENST00000366889 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
PACRG-203ENST00000366889 WASHC2AQ641Q2 1341 aa11.96□□□□□ -0.49
PACRG-203ENST00000366889 C11orf95C9JLR9 678 aaPredicted RBP11.96□□□□□ -0.5
PACRG-203ENST00000366889 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.5
PACRG-203ENST00000366889 SPOCK2Q92563 424 aa11.96□□□□□ -0.5
PACRG-203ENST00000366889 SLAIN2Q9P270 581 aa11.96□□□□□ -0.5
PACRG-203ENST00000366889 MSH6P52701 1360 aa11.95□□□□□ -0.5
PACRG-203ENST00000366889 ADAMTS13Q76LX8 1427 aa11.95□□□□□ -0.5
PACRG-203ENST00000366889 NRXN3Q9Y4C0 1643 aa11.95□□□□□ -0.5
PACRG-203ENST00000366889 NUTM2BA6NNL0 878 aaPredicted RBP11.95□□□□□ -0.5
PACRG-203ENST00000366889 NUTM2EB1AL46 878 aaPredicted RBP11.95□□□□□ -0.5
PACRG-203ENST00000366889 NUTM2AQ8IVF1 878 aaPredicted RBP11.95□□□□□ -0.5
PACRG-203ENST00000366889 CCDC7Q96M83 1385 aa11.95□□□□□ -0.5
PACRG-203ENST00000366889 KCNA6P17658 529 aa11.94□□□□□ -0.5
PACRG-203ENST00000366889 CHD2O14647 1828 aaKnown RBP11.93□□□□□ -0.5
PACRG-203ENST00000366889 LRP5O75197 1615 aa11.93□□□□□ -0.5
PACRG-203ENST00000366889 TESK2Q96S53 571 aa11.93□□□□□ -0.5
PACRG-203ENST00000366889 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.93□□□□□ -0.5
PACRG-203ENST00000366889 KIF7Q2M1P5 1343 aa11.92□□□□□ -0.5
PACRG-203ENST00000366889 DDX10Q13206 875 aaKnown RBP11.92□□□□□ -0.5
PACRG-203ENST00000366889 ZNF579Q8NAF0 562 aaKnown RBP11.92□□□□□ -0.5
PACRG-203ENST00000366889 ASXL1Q8IXJ9 1541 aa11.92□□□□□ -0.5
PACRG-203ENST00000366889 EIF3AQ14152 1382 aaKnown RBP11.92□□□□□ -0.5
PACRG-203ENST00000366889 TBX22Q9Y458 520 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms