RNA–Protein interactions for RNA: ENST00000366815.7

H3F3A-203, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-203ENST00000366815 TIE1P35590 1138 aa16.91■□□□□ 0.3
H3F3A-203ENST00000366815 NWD1Q149M9 1564 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 NAIPQ13075 1403 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 RIMS2Q9UQ26 1411 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 PIP4K2BP78356 416 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 ILDR2Q71H61 639 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 SPOCK2Q92563 424 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 PCDHB13Q9Y5F0 798 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 SPHKAPQ2M3C7 1700 aa16.9■□□□□ 0.3
H3F3A-203ENST00000366815 SLC26A8Q96RN1 970 aa16.88■□□□□ 0.29
H3F3A-203ENST00000366815 PLEKHG1Q9ULL1 1385 aa16.88■□□□□ 0.29
H3F3A-203ENST00000366815 HSPA1LP34931 641 aa16.87■□□□□ 0.29
H3F3A-203ENST00000366815 SGIP1Q9BQI5 828 aa16.87■□□□□ 0.29
H3F3A-203ENST00000366815 KCNA6P17658 529 aa16.86■□□□□ 0.29
H3F3A-203ENST00000366815 CHD2O14647 1828 aaKnown RBP16.86■□□□□ 0.29
H3F3A-203ENST00000366815 NKTRP30414 1462 aaKnown RBP16.86■□□□□ 0.29
H3F3A-203ENST00000366815 HFM1A2PYH4 1435 aa16.85■□□□□ 0.29
H3F3A-203ENST00000366815 CHGAP10645 457 aaKnown RBP16.83■□□□□ 0.28
H3F3A-203ENST00000366815 HDGFP51858 240 aaKnown RBP16.83■□□□□ 0.28
H3F3A-203ENST00000366815 TMEM94Q12767 1356 aa16.83■□□□□ 0.28
H3F3A-203ENST00000366815 ADAMTS13Q76LX8 1427 aa16.82■□□□□ 0.28
H3F3A-203ENST00000366815 DCAF8Q5TAQ9 597 aa16.82■□□□□ 0.28
H3F3A-203ENST00000366815 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.82■□□□□ 0.28
H3F3A-203ENST00000366815 CLTCL1P53675 1640 aa16.81■□□□□ 0.28
H3F3A-203ENST00000366815 DIP2AQ14689 1571 aa16.81■□□□□ 0.28
H3F3A-203ENST00000366815 TTLL13PA6NNM8 815 aa16.81■□□□□ 0.28
H3F3A-203ENST00000366815 PPP1R15AO75807 674 aaPredicted RBP16.81■□□□□ 0.28
H3F3A-203ENST00000366815 TRPM2O94759 1503 aa16.8■□□□□ 0.28
H3F3A-203ENST00000366815 BCANQ96GW7 911 aa16.8■□□□□ 0.28
H3F3A-203ENST00000366815 AMER1Q5JTC6 1135 aaPredicted RBP16.79■□□□□ 0.28
H3F3A-203ENST00000366815 PROSER2Q86WR7 435 aaPredicted RBP16.79■□□□□ 0.28
H3F3A-203ENST00000366815 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
H3F3A-203ENST00000366815 NRXN3Q9Y4C0 1643 aa16.78■□□□□ 0.28
H3F3A-203ENST00000366815 MED1Q15648 1581 aaPredicted RBP16.78■□□□□ 0.28
H3F3A-203ENST00000366815 NUTM2DQ5VT03 806 aaPredicted RBP16.78■□□□□ 0.28
H3F3A-203ENST00000366815 MAMSTRQ6ZN01 415 aa16.77■□□□□ 0.28
H3F3A-203ENST00000366815 IFNL1Q8IU54 200 aa16.77■□□□□ 0.28
H3F3A-203ENST00000366815 RBM33Q96EV2 1170 aaKnown RBP16.77■□□□□ 0.28
H3F3A-203ENST00000366815 KIF1BO60333 1816 aa16.76■□□□□ 0.27
H3F3A-203ENST00000366815 POTEJP0CG39 1038 aa16.76■□□□□ 0.27
H3F3A-203ENST00000366815 SETBP1Q9Y6X0 1596 aa16.76■□□□□ 0.27
H3F3A-203ENST00000366815 PIK3R4Q99570 1358 aa16.76■□□□□ 0.27
H3F3A-203ENST00000366815 FAM135BQ49AJ0 1406 aa16.75■□□□□ 0.27
H3F3A-203ENST00000366815 NEXMIFQ5QGS0 1516 aa16.75■□□□□ 0.27
H3F3A-203ENST00000366815 ROBO1Q9Y6N7 1651 aa16.74■□□□□ 0.27
H3F3A-203ENST00000366815 SEC24BO95487 1268 aa16.73■□□□□ 0.27
H3F3A-203ENST00000366815 TRIM35Q9UPQ4 493 aa16.73■□□□□ 0.27
H3F3A-203ENST00000366815 PTPRUQ92729 1446 aa16.72■□□□□ 0.27
H3F3A-203ENST00000366815 SOCS7O14512 581 aa16.72■□□□□ 0.27
H3F3A-203ENST00000366815 XRN1Q8IZH2 1706 aaKnown RBP16.72■□□□□ 0.27
H3F3A-203ENST00000366815 MSH6P52701 1360 aa16.72■□□□□ 0.27
H3F3A-203ENST00000366815 NCOA3Q9Y6Q9 1424 aa16.71■□□□□ 0.27
H3F3A-203ENST00000366815 POTEFA5A3E0 1075 aa16.71■□□□□ 0.27
H3F3A-203ENST00000366815 PYGBP11216 843 aa16.71■□□□□ 0.27
H3F3A-203ENST00000366815 TRIM52Q96A61 297 aa16.71■□□□□ 0.27
H3F3A-203ENST00000366815 SCUBE2Q9NQ36 999 aa16.7■□□□□ 0.26
H3F3A-203ENST00000366815 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
H3F3A-203ENST00000366815 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.69■□□□□ 0.26
H3F3A-203ENST00000366815 TMEM106CQ9BVX2 250 aa16.68■□□□□ 0.26
H3F3A-203ENST00000366815 AMOTL2Q9Y2J4 779 aa16.67■□□□□ 0.26
H3F3A-203ENST00000366815 SETD1AO15047 1707 aaKnown RBP16.67■□□□□ 0.26
H3F3A-203ENST00000366815 PPLO60437 1756 aa16.66■□□□□ 0.26
H3F3A-203ENST00000366815 METP08581 1390 aa16.65■□□□□ 0.26
H3F3A-203ENST00000366815 SLAIN2Q9P270 581 aa16.65■□□□□ 0.26
H3F3A-203ENST00000366815 COLQQ9Y215 455 aaPredicted RBP16.65■□□□□ 0.26
H3F3A-203ENST00000366815 IER5LQ5T953 404 aa16.64■□□□□ 0.25
H3F3A-203ENST00000366815 RTN4Q9NQC3 1192 aaKnown RBP16.64■□□□□ 0.25
H3F3A-203ENST00000366815 PHLPP1O60346 1717 aa16.63■□□□□ 0.25
H3F3A-203ENST00000366815 GSE1Q14687 1217 aa16.63■□□□□ 0.25
H3F3A-203ENST00000366815 C19orf44Q9H6X5 657 aa16.62■□□□□ 0.25
H3F3A-203ENST00000366815 COL16A1Q07092 1604 aaPredicted RBP16.61■□□□□ 0.25
H3F3A-203ENST00000366815 C14orf37Q86TY3 774 aa16.61■□□□□ 0.25
H3F3A-203ENST00000366815 CIZ1Q9ULV3 898 aaPredicted RBP16.61■□□□□ 0.25
H3F3A-203ENST00000366815 DCCP43146 1447 aa16.61■□□□□ 0.25
H3F3A-203ENST00000366815 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
H3F3A-203ENST00000366815 MPHOSPH9Q99550 1183 aa16.6■□□□□ 0.25
H3F3A-203ENST00000366815 RPGRIP1LQ68CZ1 1315 aa16.6■□□□□ 0.25
H3F3A-203ENST00000366815 NALCNQ8IZF0 1738 aa16.59■□□□□ 0.25
H3F3A-203ENST00000366815 IFT172Q9UG01 1749 aa16.59■□□□□ 0.25
H3F3A-203ENST00000366815 VGFO15240 615 aaPredicted RBP16.59■□□□□ 0.25
H3F3A-203ENST00000366815 CCDC144AA2RUR9 1427 aa16.58■□□□□ 0.24
H3F3A-203ENST00000366815 SPATA31E1Q6ZUB1 1445 aa16.58■□□□□ 0.24
H3F3A-203ENST00000366815 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.24
H3F3A-203ENST00000366815 AHDC1Q5TGY3 1603 aaPredicted RBP16.58■□□□□ 0.24
H3F3A-203ENST00000366815 PRAG1Q86YV5 1406 aa16.57■□□□□ 0.24
H3F3A-203ENST00000366815 ATF3P18847 181 aa16.57■□□□□ 0.24
H3F3A-203ENST00000366815 PCDHB8Q9UN66 801 aa16.57■□□□□ 0.24
H3F3A-203ENST00000366815 ADGRL3Q9HAR2 1447 aa16.56■□□□□ 0.24
H3F3A-203ENST00000366815 MST1RQ04912 1400 aa16.55■□□□□ 0.24
H3F3A-203ENST00000366815 PTCH1Q13635 1447 aa16.55■□□□□ 0.24
H3F3A-203ENST00000366815 ACIN1Q9UKV3 1341 aaKnown RBP16.55■□□□□ 0.24
H3F3A-203ENST00000366815 JCADQ9P266 1359 aa16.53■□□□□ 0.24
H3F3A-203ENST00000366815 RGS17Q9UGC6 210 aaPredicted RBP16.53■□□□□ 0.24
H3F3A-203ENST00000366815 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
H3F3A-203ENST00000366815 RAB3GAP2Q9H2M9 1393 aa16.52■□□□□ 0.24
H3F3A-203ENST00000366815 ROBO2Q9HCK4 1378 aa16.52■□□□□ 0.24
H3F3A-203ENST00000366815 ASXL1Q8IXJ9 1541 aa16.52■□□□□ 0.24
H3F3A-203ENST00000366815 POTEMA6NI47 508 aa16.52■□□□□ 0.24
H3F3A-203ENST00000366815 PLCG2P16885 1265 aa16.52■□□□□ 0.24
H3F3A-203ENST00000366815 BRINP3Q76B58 766 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms