RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 PDCP20941 246 aa20.11■□□□□ 0.81
NID1-202ENST00000366595 BCL2L13Q9BXK5 485 aa20.11■□□□□ 0.81
NID1-202ENST00000366595 TSPY26PQ9H489 355 aa20.11■□□□□ 0.81
NID1-202ENST00000366595 LUC7LQ9NQ29 371 aaKnown RBP20.11■□□□□ 0.81
NID1-202ENST00000366595 UACAQ9BZF9 1416 aa20.11■□□□□ 0.81
NID1-202ENST00000366595 RABEP1Q15276 862 aa20.11■□□□□ 0.81
NID1-202ENST00000366595 ZFYVE27Q5T4F4 411 aa20.11■□□□□ 0.81
NID1-202ENST00000366595 TAF3Q5VWG9 929 aa20.11■□□□□ 0.81
NID1-202ENST00000366595 PLIN1O60240 522 aa20.1■□□□□ 0.81
NID1-202ENST00000366595 COG3Q96JB2 828 aa20.1■□□□□ 0.81
NID1-202ENST00000366595 KINO60870 393 aaKnown RBP20.1■□□□□ 0.81
NID1-202ENST00000366595 TTC5Q8N0Z6 440 aa20.1■□□□□ 0.81
NID1-202ENST00000366595 PRKRIP1Q9H875 184 aaPredicted RBP20.09■□□□□ 0.81
NID1-202ENST00000366595 PLCD4Q9BRC7 762 aa20.09■□□□□ 0.81
NID1-202ENST00000366595 NINLQ9Y2I6 1382 aa20.08■□□□□ 0.81
NID1-202ENST00000366595 ELL2O00472 640 aaPredicted RBP20.08■□□□□ 0.81
NID1-202ENST00000366595 TRAK2O60296 914 aa20.08■□□□□ 0.8
NID1-202ENST00000366595 PANK3Q9H999 370 aa20.08■□□□□ 0.8
NID1-202ENST00000366595 MAGEC2Q9UBF1 373 aaPredicted RBP20.07■□□□□ 0.8
NID1-202ENST00000366595 LTV1Q96GA3 475 aaPredicted RBP20.07■□□□□ 0.8
NID1-202ENST00000366595 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.07■□□□□ 0.8
NID1-202ENST00000366595 RAD21O60216 631 aa20.06■□□□□ 0.8
NID1-202ENST00000366595 ZNHIT6Q9NWK9 470 aaKnown RBP20.06■□□□□ 0.8
NID1-202ENST00000366595 FBXW7Q969H0 707 aa20.06■□□□□ 0.8
NID1-202ENST00000366595 VPS37DQ86XT2 251 aa20.06■□□□□ 0.8
NID1-202ENST00000366595 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.06■□□□□ 0.8
NID1-202ENST00000366595 EZRP15311 586 aaKnown RBP20.06■□□□□ 0.8
NID1-202ENST00000366595 SMC2O95347 1197 aa20.05■□□□□ 0.8
NID1-202ENST00000366595 NEFHP12036 1026 aa20.05■□□□□ 0.8
NID1-202ENST00000366595 EVC2Q86UK5 1308 aa20.04■□□□□ 0.8
NID1-202ENST00000366595 ZNF396Q96N95 335 aaPredicted RBP20.04■□□□□ 0.8
NID1-202ENST00000366595 TXLNAP40222 546 aa20.04■□□□□ 0.8
NID1-202ENST00000366595 CCDC112Q8NEF3 446 aa20.04■□□□□ 0.8
NID1-202ENST00000366595 DEF6Q9H4E7 631 aa20.04■□□□□ 0.8
NID1-202ENST00000366595 CUX2O14529 1486 aa20.03■□□□□ 0.8
NID1-202ENST00000366595 IQCEQ6IPM2 695 aa20.03■□□□□ 0.8
NID1-202ENST00000366595 SYCP1Q15431 976 aa20.03■□□□□ 0.8
NID1-202ENST00000366595 RNF214Q8ND24 703 aa20.02■□□□□ 0.8
NID1-202ENST00000366595 SEPT7Q16181 437 aaKnown RBP20.02■□□□□ 0.8
NID1-202ENST00000366595 PDCL2Q8N4E4 241 aa20.02■□□□□ 0.8
NID1-202ENST00000366595 DACH1Q9UI36 760 aa20.02■□□□□ 0.8
NID1-202ENST00000366595 SART3Q15020 963 aaKnown RBP20.01■□□□□ 0.79
NID1-202ENST00000366595 JMYQ8N9B5 988 aa20.01■□□□□ 0.79
NID1-202ENST00000366595 GNAI1P63096 354 aa20.01■□□□□ 0.79
NID1-202ENST00000366595 APAF1O14727 1248 aa20■□□□□ 0.79
NID1-202ENST00000366595 KIF3BO15066 747 aa20■□□□□ 0.79
NID1-202ENST00000366595 HIP1O00291 1037 aa20■□□□□ 0.79
NID1-202ENST00000366595 RRP9O43818 475 aaKnown RBP20■□□□□ 0.79
NID1-202ENST00000366595 DIAPH1O60610 1272 aaKnown RBP20■□□□□ 0.79
NID1-202ENST00000366595 TTLL5Q6EMB2 1281 aa20■□□□□ 0.79
NID1-202ENST00000366595 FKBP5Q13451 457 aaPredicted RBP19.99■□□□□ 0.79
NID1-202ENST00000366595 ST20-MTHFSA0A0A6YYL1 179 aa19.99■□□□□ 0.79
NID1-202ENST00000366595 CNTROBQ8N137 903 aa19.99■□□□□ 0.79
NID1-202ENST00000366595 CCDC192P0DO97 292 aa19.98■□□□□ 0.79
NID1-202ENST00000366595 CCDC181Q5TID7 509 aa19.98■□□□□ 0.79
NID1-202ENST00000366595 CWC22Q9HCG8 908 aaKnown RBP19.98■□□□□ 0.79
NID1-202ENST00000366595 CCDC144AA2RUR9 1427 aa19.97■□□□□ 0.79
NID1-202ENST00000366595 DYDC1Q8WWB3 177 aa19.97■□□□□ 0.79
NID1-202ENST00000366595 CBFA2T2O43439 604 aa19.97■□□□□ 0.79
NID1-202ENST00000366595 KANK4Q5T7N3 995 aaPredicted RBP19.97■□□□□ 0.79
NID1-202ENST00000366595 CCAR1Q8IX12 1150 aaKnown RBP19.97■□□□□ 0.79
NID1-202ENST00000366595 RUNDC1Q96C34 613 aa19.97■□□□□ 0.79
NID1-202ENST00000366595 ERCC6Q03468 1493 aa19.97■□□□□ 0.79
NID1-202ENST00000366595 EIF2S2P20042 333 aaKnown RBP19.97■□□□□ 0.79
NID1-202ENST00000366595 PPFIBP1Q86W92 1011 aa19.97■□□□□ 0.79
NID1-202ENST00000366595 RB1CC1Q8TDY2 1594 aa19.97■□□□□ 0.79
NID1-202ENST00000366595 LNPKQ9C0E8 428 aa19.96■□□□□ 0.79
NID1-202ENST00000366595 STK11IPQ8N1F8 1099 aa19.96■□□□□ 0.79
NID1-202ENST00000366595 TRAK1Q9UPV9 953 aa19.96■□□□□ 0.79
NID1-202ENST00000366595 CDK5RAP3Q96JB5 506 aa19.95■□□□□ 0.78
NID1-202ENST00000366595 RIPK4P57078 832 aa19.95■□□□□ 0.78
NID1-202ENST00000366595 ENOX2Q16206 610 aaKnown RBP19.95■□□□□ 0.78
NID1-202ENST00000366595 AEBP1Q8IUX7 1158 aa19.94■□□□□ 0.78
NID1-202ENST00000366595 STIM1Q13586 685 aa19.94■□□□□ 0.78
NID1-202ENST00000366595 WASHC2CQ9Y4E1 1318 aa19.94■□□□□ 0.78
NID1-202ENST00000366595 SKIDA1Q1XH10 827 aa19.94■□□□□ 0.78
NID1-202ENST00000366595 WASHC4Q2M389 1173 aa19.94■□□□□ 0.78
NID1-202ENST00000366595 FOSBP53539 338 aa19.93■□□□□ 0.78
NID1-202ENST00000366595 VGFO15240 615 aaPredicted RBP19.93■□□□□ 0.78
NID1-202ENST00000366595 STK38Q15208 465 aa19.93■□□□□ 0.78
NID1-202ENST00000366595 SERPINC1P01008 464 aa19.93■□□□□ 0.78
NID1-202ENST00000366595 WWC2Q6AWC2 1192 aa19.93■□□□□ 0.78
NID1-202ENST00000366595 GBP3Q9H0R5 595 aa19.93■□□□□ 0.78
NID1-202ENST00000366595 PRPF40AO75400 957 aaKnown RBP19.92■□□□□ 0.78
NID1-202ENST00000366595 ANKRD62A6NC57 917 aa19.91■□□□□ 0.78
NID1-202ENST00000366595 CCDC18Q5T9S5 1454 aa19.91■□□□□ 0.78
NID1-202ENST00000366595 PDIA4P13667 645 aaKnown RBP19.91■□□□□ 0.78
NID1-202ENST00000366595 RBM10P98175 930 aaKnown RBP19.91■□□□□ 0.78
NID1-202ENST00000366595 USP47Q96K76 1375 aa19.91■□□□□ 0.78
NID1-202ENST00000366595 KIF2AO00139 706 aaPredicted RBP19.9■□□□□ 0.78
NID1-202ENST00000366595 PODXL2Q9NZ53 605 aa19.9■□□□□ 0.78
NID1-202ENST00000366595 GIMAP7Q8NHV1 300 aa19.9■□□□□ 0.78
NID1-202ENST00000366595 TBC1D2BQ9UPU7 963 aa19.9■□□□□ 0.78
NID1-202ENST00000366595 GNAI3P08754 354 aa19.89■□□□□ 0.78
NID1-202ENST00000366595 UBTFL1P0CB47 393 aaPredicted RBP19.89■□□□□ 0.77
NID1-202ENST00000366595 ANKRD1Q15327 319 aa19.89■□□□□ 0.77
NID1-202ENST00000366595 CLASRPQ8N2M8 674 aaKnown RBP19.89■□□□□ 0.77
NID1-202ENST00000366595 PAF1Q8N7H5 531 aa19.89■□□□□ 0.77
NID1-202ENST00000366595 FMNL2Q96PY5 1086 aa19.89■□□□□ 0.77
NID1-202ENST00000366595 FSD1Q9BTV5 496 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms