RNA–Protein interactions for RNA: ENST00000366197.9

ZNF548-202, Transcript of zinc finger protein 548, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ZNF548, Length 4,955 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-202ENST00000366197 ADAMTS8Q9UP79 889 aa12.6□□□□□ -0.39
ZNF548-202ENST00000366197 ERC2O15083 957 aa12.6□□□□□ -0.39
ZNF548-202ENST00000366197 TRIM29Q14134 588 aa12.6□□□□□ -0.39
ZNF548-202ENST00000366197 AAMPQ13685 434 aa12.59□□□□□ -0.39
ZNF548-202ENST00000366197 FOXD4L6Q3SYB3 417 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-202ENST00000366197 FOXD4L3Q6VB84 417 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-202ENST00000366197 ANKLE2Q86XL3 938 aa12.59□□□□□ -0.39
ZNF548-202ENST00000366197 UBTFL1P0CB47 393 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-202ENST00000366197 CEP89Q96ST8 783 aa12.59□□□□□ -0.39
ZNF548-202ENST00000366197 LNPKQ9C0E8 428 aa12.59□□□□□ -0.39
ZNF548-202ENST00000366197 CD109Q6YHK3 1445 aa12.59□□□□□ -0.39
ZNF548-202ENST00000366197 NBPF1Q3BBV0 1214 aa12.59□□□□□ -0.39
ZNF548-202ENST00000366197 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
ZNF548-202ENST00000366197 PES1O00541 588 aaKnown RBP12.59□□□□□ -0.39
ZNF548-202ENST00000366197 PLEKHO1Q53GL0 409 aaPredicted RBP12.59□□□□□ -0.39
ZNF548-202ENST00000366197 RBM33Q96EV2 1170 aaKnown RBP12.59□□□□□ -0.39
ZNF548-202ENST00000366197 TPM3P06753 285 aa12.58□□□□□ -0.4
ZNF548-202ENST00000366197 PIP4K2BP78356 416 aa12.58□□□□□ -0.4
ZNF548-202ENST00000366197 TPD52L1Q16890 204 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-202ENST00000366197 MAGI1Q96QZ7 1491 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-202ENST00000366197 CTDP1Q9Y5B0 961 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-202ENST00000366197 BECN2A8MW95 431 aa12.58□□□□□ -0.4
ZNF548-202ENST00000366197 DHX16O60231 1041 aaKnown RBP12.58□□□□□ -0.4
ZNF548-202ENST00000366197 ZNF692Q9BU19 519 aaPredicted RBP12.58□□□□□ -0.4
ZNF548-202ENST00000366197 SLC12A5Q9H2X9 1139 aa12.58□□□□□ -0.4
ZNF548-202ENST00000366197 PRKAR2BP31323 418 aa12.58□□□□□ -0.4
ZNF548-202ENST00000366197 SYNJ1O43426 1573 aa12.57□□□□□ -0.4
ZNF548-202ENST00000366197 URB2Q14146 1524 aaKnown RBP12.57□□□□□ -0.4
ZNF548-202ENST00000366197 BRD4O60885 1362 aaPredicted RBP12.57□□□□□ -0.4
ZNF548-202ENST00000366197 WASHC2AQ641Q2 1341 aa12.57□□□□□ -0.4
ZNF548-202ENST00000366197 SLC4A3P48751 1232 aa12.57□□□□□ -0.4
ZNF548-202ENST00000366197 PLEKHH2Q8IVE3 1493 aa12.57□□□□□ -0.4
ZNF548-202ENST00000366197 CNTLNQ9NXG0 1405 aa12.57□□□□□ -0.4
ZNF548-202ENST00000366197 GOLGA6L19H0YKK7 550 aa12.57□□□□□ -0.4
ZNF548-202ENST00000366197 INTS3Q68E01 1043 aaKnown RBP12.57□□□□□ -0.4
ZNF548-202ENST00000366197 ARAP1Q96P48 1450 aa12.57□□□□□ -0.4
ZNF548-202ENST00000366197 GNAI3P08754 354 aa12.56□□□□□ -0.4
ZNF548-202ENST00000366197 CCDC30Q5VVM6 783 aa12.56□□□□□ -0.4
ZNF548-202ENST00000366197 FBXW7Q969H0 707 aa12.56□□□□□ -0.4
ZNF548-202ENST00000366197 TROQ12816 1431 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-202ENST00000366197 ABCA10Q8WWZ4 1543 aa12.56□□□□□ -0.4
ZNF548-202ENST00000366197 TSR1Q2NL82 804 aaKnown RBP12.56□□□□□ -0.4
ZNF548-202ENST00000366197 SKOR2Q2VWA4 1001 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-202ENST00000366197 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.56□□□□□ -0.4
ZNF548-202ENST00000366197 C9orf84Q5VXU9 1444 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 ERICH2A1L162 156 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 PPP2R1AP30153 589 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 CLASRPQ8N2M8 674 aaKnown RBP12.55□□□□□ -0.4
ZNF548-202ENST00000366197 PANK1Q8TE04 598 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 SLC26A8Q96RN1 970 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 ERICH3Q5RHP9 1530 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 CABP1Q9NZU7 370 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 TCEAL9Q9UHQ7 104 aa12.55□□□□□ -0.4
ZNF548-202ENST00000366197 NFXL1Q6ZNB6 911 aa12.54□□□□□ -0.4
ZNF548-202ENST00000366197 RALYLQ86SE5 291 aaKnown RBP12.54□□□□□ -0.4
ZNF548-202ENST00000366197 GRIN2AQ12879 1464 aa12.54□□□□□ -0.4
ZNF548-202ENST00000366197 TATP17735 454 aaPredicted RBP12.54□□□□□ -0.4
ZNF548-202ENST00000366197 CDK19Q9BWU1 502 aa12.54□□□□□ -0.4
ZNF548-202ENST00000366197 STRN4Q9NRL3 753 aa12.54□□□□□ -0.4
ZNF548-202ENST00000366197 WASHC4Q2M389 1173 aa12.54□□□□□ -0.4
ZNF548-202ENST00000366197 KLHL34Q8N239 644 aa12.53□□□□□ -0.4
ZNF548-202ENST00000366197 SURF6O75683 361 aaKnown RBP12.53□□□□□ -0.4
ZNF548-202ENST00000366197 PDE4CQ08493 712 aa12.52□□□□□ -0.4
ZNF548-202ENST00000366197 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.4
ZNF548-202ENST00000366197 CCDC47Q96A33 483 aaKnown RBP12.52□□□□□ -0.4
ZNF548-202ENST00000366197 RBM42Q9BTD8 480 aaKnown RBP12.52□□□□□ -0.4
ZNF548-202ENST00000366197 KIAA1107Q9UPP5 1409 aa12.52□□□□□ -0.41
ZNF548-202ENST00000366197 TPM1P09493 284 aa12.52□□□□□ -0.41
ZNF548-202ENST00000366197 EXOSC9Q06265 439 aaKnown RBP12.52□□□□□ -0.41
ZNF548-202ENST00000366197 TWISTNBQ3B726 338 aaPredicted RBP12.51□□□□□ -0.41
ZNF548-202ENST00000366197 SMC3Q9UQE7 1217 aa12.51□□□□□ -0.41
ZNF548-202ENST00000366197 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
ZNF548-202ENST00000366197 TPM2P07951 284 aa12.51□□□□□ -0.41
ZNF548-202ENST00000366197 VPS37CA5D8V6 355 aaPredicted RBP12.51□□□□□ -0.41
ZNF548-202ENST00000366197 RPGRIP1LQ68CZ1 1315 aa12.51□□□□□ -0.41
ZNF548-202ENST00000366197 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
ZNF548-202ENST00000366197 NUTM2BA6NNL0 878 aaPredicted RBP12.5□□□□□ -0.41
ZNF548-202ENST00000366197 FAM177BA6PVY3 158 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 NUTM2EB1AL46 878 aaPredicted RBP12.5□□□□□ -0.41
ZNF548-202ENST00000366197 NUTM2AQ8IVF1 878 aaPredicted RBP12.5□□□□□ -0.41
ZNF548-202ENST00000366197 CHMP5Q9NZZ3 219 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 CCDC27Q2M243 656 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 BICD2Q8TD16 824 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 HDGFL1Q5TGJ6 251 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 TOM1L2Q6ZVM7 507 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 EFCAB5A4FU69 1503 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 CDCA7LQ96GN5 454 aa12.5□□□□□ -0.41
ZNF548-202ENST00000366197 SMG6Q86US8 1419 aaKnown RBP12.49□□□□□ -0.41
ZNF548-202ENST00000366197 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
ZNF548-202ENST00000366197 CEBPAP49715 358 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-202ENST00000366197 NBPF8Q3BBV2 869 aa12.49□□□□□ -0.41
ZNF548-202ENST00000366197 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
ZNF548-202ENST00000366197 PRDM11Q9NQV5 511 aa12.49□□□□□ -0.41
ZNF548-202ENST00000366197 ZNF530Q6P9A1 599 aaPredicted RBP12.49□□□□□ -0.41
ZNF548-202ENST00000366197 ANKRD30BQ9BXX2 1392 aa12.49□□□□□ -0.41
ZNF548-202ENST00000366197 NUCB2P80303 420 aa12.49□□□□□ -0.41
ZNF548-202ENST00000366197 C22orf23Q9BZE7 217 aa12.49□□□□□ -0.41
ZNF548-202ENST00000366197 CDC45O75419 566 aa12.48□□□□□ -0.41
ZNF548-202ENST00000366197 KIF6Q6ZMV9 814 aa12.48□□□□□ -0.41
ZNF548-202ENST00000366197 ANKRD20A12PQ8NF67 263 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms