RNA–Protein interactions for RNA: ENST00000363925.1

RNU4-1-201, Transcript of RNA, U4 small nuclear 1, humanhuman

BASIC

Gene RNU4-1, Length 141 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-1-201ENST00000363925 ZPR1O75312 459 aa7.39□□□□□ -1.23
RNU4-1-201ENST00000363925 TJAP1Q5JTD0 557 aa7.39□□□□□ -1.23
RNU4-1-201ENST00000363925 PROCA1Q8NCQ7 364 aaPredicted RBP7.39□□□□□ -1.23
RNU4-1-201ENST00000363925 SPTLC1O15269 473 aa7.38□□□□□ -1.23
RNU4-1-201ENST00000363925 RNF19BQ6ZMZ0 732 aa7.38□□□□□ -1.23
RNU4-1-201ENST00000363925 CABLES1Q8TDN4 633 aa7.38□□□□□ -1.23
RNU4-1-201ENST00000363925 SPSB2Q99619 263 aa7.38□□□□□ -1.23
RNU4-1-201ENST00000363925 PLA2G2EQ9NZK7 142 aa7.38□□□□□ -1.23
RNU4-1-201ENST00000363925 PCDHB15Q9Y5E8 787 aa7.38□□□□□ -1.23
RNU4-1-201ENST00000363925 TMEM132AQ24JP5 1023 aa7.37□□□□□ -1.23
RNU4-1-201ENST00000363925 ZBTB3Q9H5J0 574 aa7.37□□□□□ -1.23
RNU4-1-201ENST00000363925 PCDHGC3Q9UN70 934 aa7.37□□□□□ -1.23
RNU4-1-201ENST00000363925 MTMR2Q13614 643 aa7.36□□□□□ -1.23
RNU4-1-201ENST00000363925 NKX2-3Q8TAU0 364 aa7.36□□□□□ -1.23
RNU4-1-201ENST00000363925 ADH1BP00325 375 aa7.35□□□□□ -1.23
RNU4-1-201ENST00000363925 SLC6A16Q9GZN6 736 aa7.35□□□□□ -1.23
RNU4-1-201ENST00000363925 HRCP23327 699 aa7.34□□□□□ -1.23
RNU4-1-201ENST00000363925 QPCTQ16769 361 aa7.34□□□□□ -1.23
RNU4-1-201ENST00000363925 BRICD5Q6PL45 260 aa7.34□□□□□ -1.23
RNU4-1-201ENST00000363925 USB1Q9BQ65 265 aaKnown RBP7.34□□□□□ -1.23
RNU4-1-201ENST00000363925 ITGBL1O95965 494 aaPredicted RBP7.33□□□□□ -1.24
RNU4-1-201ENST00000363925 GGCXP38435 758 aa7.33□□□□□ -1.24
RNU4-1-201ENST00000363925 PRR7Q8TB68 274 aa7.33□□□□□ -1.24
RNU4-1-201ENST00000363925 S1PR4O95977 384 aa7.32□□□□□ -1.24
RNU4-1-201ENST00000363925 GJA5P36382 358 aa7.32□□□□□ -1.24
RNU4-1-201ENST00000363925 RTL5Q5HYW3 569 aaPredicted RBP7.32□□□□□ -1.24
RNU4-1-201ENST00000363925 RETREG3Q86VR2 466 aa7.32□□□□□ -1.24
RNU4-1-201ENST00000363925 CCDC24Q8N4L8 307 aa7.32□□□□□ -1.24
RNU4-1-201ENST00000363925 GOPCQ9HD26 462 aa7.32□□□□□ -1.24
RNU4-1-201ENST00000363925 PRDM9Q9NQV7 894 aa7.32□□□□□ -1.24
RNU4-1-201ENST00000363925 SPDYE5A6NIY4 337 aa7.31□□□□□ -1.24
RNU4-1-201ENST00000363925 LILRB3O75022 631 aa7.31□□□□□ -1.24
RNU4-1-201ENST00000363925 AP1G2O75843 785 aa7.31□□□□□ -1.24
RNU4-1-201ENST00000363925 PRPF38BQ5VTL8 546 aaKnown RBP7.31□□□□□ -1.24
RNU4-1-201ENST00000363925 HELBQ8NG08 1087 aaPredicted RBP7.31□□□□□ -1.24
RNU4-1-201ENST00000363925 PPEF1O14829 653 aaPredicted RBP7.3□□□□□ -1.24
RNU4-1-201ENST00000363925 THAP11Q96EK4 314 aa7.3□□□□□ -1.24
RNU4-1-201ENST00000363925 SALL2Q9Y467 1007 aaPredicted RBP7.3□□□□□ -1.24
RNU4-1-201ENST00000363925 TUSC1Q2TAM9 212 aa7.29□□□□□ -1.24
RNU4-1-201ENST00000363925 FAM160A2Q8N612 972 aaPredicted RBP7.29□□□□□ -1.24
RNU4-1-201ENST00000363925 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.29□□□□□ -1.24
RNU4-1-201ENST00000363925 CFAP99D6REC4 459 aa7.28□□□□□ -1.24
RNU4-1-201ENST00000363925 JUNDP17535 347 aa7.28□□□□□ -1.24
RNU4-1-201ENST00000363925 CTHP32929 405 aa7.28□□□□□ -1.24
RNU4-1-201ENST00000363925 RFC5P40937 340 aa7.28□□□□□ -1.24
RNU4-1-201ENST00000363925 MSS51Q4VC12 460 aa7.28□□□□□ -1.24
RNU4-1-201ENST00000363925 PPP1R18Q6NYC8 613 aa7.28□□□□□ -1.24
RNU4-1-201ENST00000363925 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.28□□□□□ -1.24
RNU4-1-201ENST00000363925 FCF1Q9Y324 198 aaKnown RBP7.26□□□□□ -1.25
RNU4-1-201ENST00000363925 FBXO31Q5XUX0 539 aaPredicted RBP7.25□□□□□ -1.25
RNU4-1-201ENST00000363925 NUDT12Q9BQG2 462 aa7.25□□□□□ -1.25
RNU4-1-201ENST00000363925 RNF223E7ERA6 249 aa7.24□□□□□ -1.25
RNU4-1-201ENST00000363925 ZBTB24O43167 697 aaPredicted RBP7.24□□□□□ -1.25
RNU4-1-201ENST00000363925 CTDSPL2Q05D32 466 aa7.24□□□□□ -1.25
RNU4-1-201ENST00000363925 TMEM259Q4ZIN3 620 aa7.24□□□□□ -1.25
RNU4-1-201ENST00000363925 PPP2R2DQ66LE6 453 aa7.24□□□□□ -1.25
RNU4-1-201ENST00000363925 A0A0G2JS52 829 aa7.23□□□□□ -1.25
RNU4-1-201ENST00000363925 DXOO77932 396 aaKnown RBP7.23□□□□□ -1.25
RNU4-1-201ENST00000363925 PER1O15534 1290 aaPredicted RBP7.22□□□□□ -1.25
RNU4-1-201ENST00000363925 USP17L8P0C7I0 530 aa7.22□□□□□ -1.25
RNU4-1-201ENST00000363925 CCNYL3P0C7X3 344 aa7.22□□□□□ -1.25
RNU4-1-201ENST00000363925 MMP16P51512 607 aa7.22□□□□□ -1.25
RNU4-1-201ENST00000363925 LRRN4Q8WUT4 740 aa7.22□□□□□ -1.25
RNU4-1-201ENST00000363925 PTPRNQ16849 979 aa7.21□□□□□ -1.26
RNU4-1-201ENST00000363925 IFFO2Q5TF58 517 aa7.21□□□□□ -1.26
RNU4-1-201ENST00000363925 DESI1Q6ICB0 168 aa7.21□□□□□ -1.26
RNU4-1-201ENST00000363925 ANKLE1Q8NAG6 615 aa7.21□□□□□ -1.26
RNU4-1-201ENST00000363925 LYPD8Q6UX82 237 aa7.2□□□□□ -1.26
RNU4-1-201ENST00000363925 MAP10Q9P2G4 905 aa7.2□□□□□ -1.26
RNU4-1-201ENST00000363925 GTF3C3Q9Y5Q9 886 aa7.19□□□□□ -1.26
RNU4-1-201ENST00000363925 KCNH2Q12809 1159 aa7.18□□□□□ -1.26
RNU4-1-201ENST00000363925 NR6A1Q15406 480 aa7.18□□□□□ -1.26
RNU4-1-201ENST00000363925 LINC01559Q495D7 138 aa7.18□□□□□ -1.26
RNU4-1-201ENST00000363925 PRKD2Q9BZL6 878 aa7.18□□□□□ -1.26
RNU4-1-201ENST00000363925 SNRKQ9NRH2 765 aa7.18□□□□□ -1.26
RNU4-1-201ENST00000363925 SLC19A1P41440 591 aa7.17□□□□□ -1.26
RNU4-1-201ENST00000363925 PLA2G2CQ5R387 149 aa7.17□□□□□ -1.26
RNU4-1-201ENST00000363925 PNMA1Q8ND90 353 aa7.17□□□□□ -1.26
RNU4-1-201ENST00000363925 BANK1Q8NDB2 785 aa7.17□□□□□ -1.26
RNU4-1-201ENST00000363925 UNC93B1Q9H1C4 597 aa7.17□□□□□ -1.26
RNU4-1-201ENST00000363925 EVA1BQ9NVM1 165 aa7.17□□□□□ -1.26
RNU4-1-201ENST00000363925 APBB1O00213 710 aa7.16□□□□□ -1.26
RNU4-1-201ENST00000363925 AGERQ15109 404 aa7.16□□□□□ -1.26
RNU4-1-201ENST00000363925 PTCRAQ6ISU1 281 aaPredicted RBP7.16□□□□□ -1.26
RNU4-1-201ENST00000363925 PRM3Q9NNZ6 103 aa7.16□□□□□ -1.26
RNU4-1-201ENST00000363925 HMX1Q9NP08 348 aaPredicted RBP7.16□□□□□ -1.26
RNU4-1-201ENST00000363925 CD2BP2O95400 341 aaKnown RBP7.15□□□□□ -1.26
RNU4-1-201ENST00000363925 UBTFP17480 764 aaKnown RBP7.14□□□□□ -1.27
RNU4-1-201ENST00000363925 FLIIQ13045 1269 aa7.14□□□□□ -1.27
RNU4-1-201ENST00000363925 LIAT1Q6ZQX7 453 aa7.14□□□□□ -1.27
RNU4-1-201ENST00000363925 EPS8L1Q8TE68 723 aa7.14□□□□□ -1.27
RNU4-1-201ENST00000363925 RAD21O60216 631 aa7.13□□□□□ -1.27
RNU4-1-201ENST00000363925 F12P00748 615 aaPredicted RBP7.13□□□□□ -1.27
RNU4-1-201ENST00000363925 FOXC1Q12948 553 aa7.13□□□□□ -1.27
RNU4-1-201ENST00000363925 TRIM32Q13049 653 aa7.13□□□□□ -1.27
RNU4-1-201ENST00000363925 ARMC2Q8NEN0 867 aa7.13□□□□□ -1.27
RNU4-1-201ENST00000363925 BAP1Q92560 729 aa7.13□□□□□ -1.27
RNU4-1-201ENST00000363925 ABL2P42684 1182 aa7.12□□□□□ -1.27
RNU4-1-201ENST00000363925 RPIAP49247 311 aa7.12□□□□□ -1.27
RNU4-1-201ENST00000363925 MTMR14Q8NCE2 650 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms