RNA–Protein interactions for RNA: ENST00000363399.1

RNU6-838P-201, Transcript of RNA, U6 small nuclear 838, pseudogene, humanhuman

BASIC

Gene RNU6-838P, Length 108 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-838P-201ENST00000363399 OBSCNQ5VST9 7968 aa1.5□□□□□ -2.17
RNU6-838P-201ENST00000363399 PPP1R3GB7ZBB8 358 aa1.49□□□□□ -2.17
RNU6-838P-201ENST00000363399 NEDD1Q8NHV4 660 aa1.49□□□□□ -2.17
RNU6-838P-201ENST00000363399 GSC2O15499 205 aa1.47□□□□□ -2.17
RNU6-838P-201ENST00000363399 CD2BP2O95400 341 aaKnown RBP1.47□□□□□ -2.17
RNU6-838P-201ENST00000363399 ELNP15502 786 aa1.47□□□□□ -2.17
RNU6-838P-201ENST00000363399 SNRPNP63162 240 aaKnown RBP1.47□□□□□ -2.17
RNU6-838P-201ENST00000363399 SAMD7Q7Z3H4 446 aa1.47□□□□□ -2.17
RNU6-838P-201ENST00000363399 ALYREFQ86V81 257 aaKnown RBP1.47□□□□□ -2.17
RNU6-838P-201ENST00000363399 TMPRSS5Q9H3S3 457 aa1.47□□□□□ -2.17
RNU6-838P-201ENST00000363399 CAPN5O15484 640 aaPredicted RBP1.46□□□□□ -2.18
RNU6-838P-201ENST00000363399 RPIAP49247 311 aa1.46□□□□□ -2.18
RNU6-838P-201ENST00000363399 GRIN2CQ14957 1233 aa1.45□□□□□ -2.18
RNU6-838P-201ENST00000363399 RIC3Q7Z5B4 369 aa1.45□□□□□ -2.18
RNU6-838P-201ENST00000363399 ZDHHC16Q969W1 377 aa1.45□□□□□ -2.18
RNU6-838P-201ENST00000363399 KCNA4P22459 653 aa1.44□□□□□ -2.18
RNU6-838P-201ENST00000363399 GATA4P43694 442 aa1.44□□□□□ -2.18
RNU6-838P-201ENST00000363399 MRGPRX2Q96LB1 330 aa1.44□□□□□ -2.18
RNU6-838P-201ENST00000363399 KRTAP4-3Q9BYR4 195 aa1.44□□□□□ -2.18
RNU6-838P-201ENST00000363399 ACSS3Q9H6R3 686 aa1.44□□□□□ -2.18
RNU6-838P-201ENST00000363399 WNT7AO00755 349 aa1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 TBC1D12O60347 775 aa1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 KRTAP5-8O75690 187 aa1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 SH3RF1Q7Z6J0 888 aa1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 POU5F2Q8N7G0 328 aa1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 NTN5Q8WTR8 489 aaPredicted RBP1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 NAF1Q96HR8 494 aaKnown RBP1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 PURBQ96QR8 312 aaKnown RBP1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 SUV39H2Q9H5I1 410 aa1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 TPSG1Q9NRR2 321 aa1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 OAS3Q9Y6K5 1087 aaKnown RBP1.43□□□□□ -2.18
RNU6-838P-201ENST00000363399 DBX1A6NMT0 343 aa1.42□□□□□ -2.18
RNU6-838P-201ENST00000363399 ONECUT3O60422 494 aaPredicted RBP1.42□□□□□ -2.18
RNU6-838P-201ENST00000363399 DBX2Q6ZNG2 339 aa1.42□□□□□ -2.18
RNU6-838P-201ENST00000363399 NANOS1Q8WY41 292 aaKnown RBP1.42□□□□□ -2.18
RNU6-838P-201ENST00000363399 MAN1A2O60476 641 aa1.41□□□□□ -2.18
RNU6-838P-201ENST00000363399 SRSF11Q05519 484 aaKnown RBP1.41□□□□□ -2.18
RNU6-838P-201ENST00000363399 HNRNPA0Q13151 305 aaKnown RBP1.41□□□□□ -2.18
RNU6-838P-201ENST00000363399 BLOC1S3Q6QNY0 202 aa1.41□□□□□ -2.18
RNU6-838P-201ENST00000363399 PLCD3Q8N3E9 789 aa1.41□□□□□ -2.18
RNU6-838P-201ENST00000363399 TMC2Q8TDI7 906 aa1.41□□□□□ -2.18
RNU6-838P-201ENST00000363399 PHF8Q9UPP1 1060 aa1.41□□□□□ -2.18
RNU6-838P-201ENST00000363399 RNF40O75150 1001 aa1.4□□□□□ -2.19
RNU6-838P-201ENST00000363399 SCARF1Q14162 830 aa1.4□□□□□ -2.19
RNU6-838P-201ENST00000363399 ZNF124Q15973 351 aa1.4□□□□□ -2.19
RNU6-838P-201ENST00000363399 GGNQ86UU5 652 aa1.39□□□□□ -2.19
RNU6-838P-201ENST00000363399 VWA5B2Q8N398 1253 aa1.39□□□□□ -2.19
RNU6-838P-201ENST00000363399 ZBTB47Q9UFB7 747 aaPredicted RBP1.39□□□□□ -2.19
RNU6-838P-201ENST00000363399 TRIM6-TRIM34B2RNG4 842 aa1.38□□□□□ -2.19
RNU6-838P-201ENST00000363399 BCRP11274 1271 aa1.38□□□□□ -2.19
RNU6-838P-201ENST00000363399 MRPL14Q6P1L8 145 aaKnown RBP1.38□□□□□ -2.19
RNU6-838P-201ENST00000363399 JPH4Q96JJ6 628 aa1.38□□□□□ -2.19
RNU6-838P-201ENST00000363399 SLC6A16Q9GZN6 736 aa1.38□□□□□ -2.19
RNU6-838P-201ENST00000363399 PCMTD2Q9NV79 361 aa1.38□□□□□ -2.19
RNU6-838P-201ENST00000363399 MKL2Q9ULH7 1088 aa1.38□□□□□ -2.19
RNU6-838P-201ENST00000363399 PCDHB3Q9Y5E6 796 aa1.37□□□□□ -2.19
RNU6-838P-201ENST00000363399 SOX12O15370 315 aa1.36□□□□□ -2.19
RNU6-838P-201ENST00000363399 CHRM1P11229 460 aaPredicted RBP1.36□□□□□ -2.19
RNU6-838P-201ENST00000363399 CDC14CA4D256 554 aa1.35□□□□□ -2.19
RNU6-838P-201ENST00000363399 SMAPO00193 183 aa1.35□□□□□ -2.19
RNU6-838P-201ENST00000363399 ADH1BP00325 375 aa1.35□□□□□ -2.19
RNU6-838P-201ENST00000363399 ALDH1A1P00352 501 aa1.35□□□□□ -2.19
RNU6-838P-201ENST00000363399 TGM1P22735 817 aa1.35□□□□□ -2.19
RNU6-838P-201ENST00000363399 GP2P55259 537 aaKnown RBP1.34□□□□□ -2.19
RNU6-838P-201ENST00000363399 SV2AQ7L0J3 742 aa1.34□□□□□ -2.19
RNU6-838P-201ENST00000363399 ZBTB22O15209 634 aa1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 ONECUT2O95948 504 aa1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 KRTAP10-6P60371 365 aaPredicted RBP1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 GAS6Q14393 721 aa1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 ZNF648Q5T619 568 aaPredicted RBP1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 PLPP6Q8IY26 295 aa1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 TRIM52Q96A61 297 aa1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 ACDQ96AP0 544 aa1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 FCF1Q9Y324 198 aaKnown RBP1.33□□□□□ -2.2
RNU6-838P-201ENST00000363399 KRTAP10-2P60368 255 aa1.32□□□□□ -2.2
RNU6-838P-201ENST00000363399 MICALL1Q8N3F8 863 aa1.32□□□□□ -2.2
RNU6-838P-201ENST00000363399 CRELD1Q96HD1 420 aa1.32□□□□□ -2.2
RNU6-838P-201ENST00000363399 RNF112Q9ULX5 631 aa1.32□□□□□ -2.2
RNU6-838P-201ENST00000363399 PTSQ03393 145 aa1.31□□□□□ -2.2
RNU6-838P-201ENST00000363399 LINC00114Q6XXX2 140 aa1.31□□□□□ -2.2
RNU6-838P-201ENST00000363399 DNMT3LQ9UJW3 386 aa1.31□□□□□ -2.2
RNU6-838P-201ENST00000363399 SSTR4P31391 388 aa1.3□□□□□ -2.2
RNU6-838P-201ENST00000363399 KRTAP19-4Q3LI73 84 aa1.3□□□□□ -2.2
RNU6-838P-201ENST00000363399 TTLL10Q6ZVT0 673 aa1.3□□□□□ -2.2
RNU6-838P-201ENST00000363399 CCDC155Q8N6L0 562 aa1.3□□□□□ -2.2
RNU6-838P-201ENST00000363399 UPF1Q92900 1129 aaKnown RBP eCLIP1.3□□□□□ -2.2
RNU6-838P-201ENST00000363399 RRAGCQ9HB90 399 aa1.3□□□□□ -2.2
RNU6-838P-201ENST00000363399 IGF1RP08069 1367 aa1.3□□□□□ -2.2
RNU6-838P-201ENST00000363399 C6orf118Q5T5N4 469 aa1.29□□□□□ -2.2
RNU6-838P-201ENST00000363399 ZDHHC13Q8IUH4 622 aa1.29□□□□□ -2.2
RNU6-838P-201ENST00000363399 OXER1Q8TDS5 423 aa1.29□□□□□ -2.2
RNU6-838P-201ENST00000363399 SHISA8B8ZZ34 492 aa1.28□□□□□ -2.2
RNU6-838P-201ENST00000363399 REPIN1Q9BWE0 567 aaKnown RBP1.28□□□□□ -2.2
RNU6-838P-201ENST00000363399 TSKSQ9UJT2 592 aa1.28□□□□□ -2.2
RNU6-838P-201ENST00000363399 ZBTB24O43167 697 aaPredicted RBP1.27□□□□□ -2.21
RNU6-838P-201ENST00000363399 OIP5O43482 229 aa1.27□□□□□ -2.21
RNU6-838P-201ENST00000363399 H2AFB1P0C5Y9 115 aa1.27□□□□□ -2.21
RNU6-838P-201ENST00000363399 H2AFB2P0C5Z0 115 aa1.27□□□□□ -2.21
RNU6-838P-201ENST00000363399 HOXB4P17483 251 aaPredicted RBP1.27□□□□□ -2.21
RNU6-838P-201ENST00000363399 ITGA6P23229 1130 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms