RNA–Protein interactions for RNA: ENST00000362942.1

RNU6-428P-201, Transcript of RNA, U6 small nuclear 428, pseudogene, humanhuman

BASIC

Gene RNU6-428P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-428P-201ENST00000362942 ZPR1O75312 459 aa5.67□□□□□ -1.5
RNU6-428P-201ENST00000362942 KCNC4Q03721 635 aa5.67□□□□□ -1.5
RNU6-428P-201ENST00000362942 SLC27A5Q9Y2P5 690 aa5.67□□□□□ -1.5
RNU6-428P-201ENST00000362942 ITGBL1O95965 494 aaPredicted RBP5.66□□□□□ -1.5
RNU6-428P-201ENST00000362942 CSPP1Q1MSJ5 1256 aa5.66□□□□□ -1.5
RNU6-428P-201ENST00000362942 RETREG3Q86VR2 466 aa5.66□□□□□ -1.5
RNU6-428P-201ENST00000362942 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.66□□□□□ -1.5
RNU6-428P-201ENST00000362942 LIMD1Q9UGP4 676 aa5.66□□□□□ -1.5
RNU6-428P-201ENST00000362942 LILRB3O75022 631 aa5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 ADH1BP00325 375 aa5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 GGCXP38435 758 aa5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 GUCA2AQ02747 115 aa5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 TJAP1Q5JTD0 557 aa5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 HELBQ8NG08 1087 aaPredicted RBP5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 SPSB2Q99619 263 aa5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 USB1Q9BQ65 265 aaKnown RBP5.65□□□□□ -1.5
RNU6-428P-201ENST00000362942 HRCP23327 699 aa5.64□□□□□ -1.51
RNU6-428P-201ENST00000362942 MSS51Q4VC12 460 aa5.64□□□□□ -1.51
RNU6-428P-201ENST00000362942 PPP2R2DQ66LE6 453 aa5.64□□□□□ -1.51
RNU6-428P-201ENST00000362942 BRICD5Q6PL45 260 aa5.64□□□□□ -1.51
RNU6-428P-201ENST00000362942 HLA-CQ95604 372 aa5.64□□□□□ -1.51
RNU6-428P-201ENST00000362942 PCDHGC3Q9UN70 934 aa5.64□□□□□ -1.51
RNU6-428P-201ENST00000362942 TMEM259Q4ZIN3 620 aa5.63□□□□□ -1.51
RNU6-428P-201ENST00000362942 IFFO2Q5TF58 517 aa5.63□□□□□ -1.51
RNU6-428P-201ENST00000362942 PROCA1Q8NCQ7 364 aaPredicted RBP5.63□□□□□ -1.51
RNU6-428P-201ENST00000362942 PCDHB15Q9Y5E8 787 aa5.63□□□□□ -1.51
RNU6-428P-201ENST00000362942 APBB1O00213 710 aa5.62□□□□□ -1.51
RNU6-428P-201ENST00000362942 DESI1Q6ICB0 168 aa5.62□□□□□ -1.51
RNU6-428P-201ENST00000362942 RNF19BQ6ZMZ0 732 aa5.62□□□□□ -1.51
RNU6-428P-201ENST00000362942 PRR7Q8TB68 274 aa5.62□□□□□ -1.51
RNU6-428P-201ENST00000362942 TSC1Q92574 1164 aa5.62□□□□□ -1.51
RNU6-428P-201ENST00000362942 THAP11Q96EK4 314 aa5.62□□□□□ -1.51
RNU6-428P-201ENST00000362942 SLC6A16Q9GZN6 736 aa5.62□□□□□ -1.51
RNU6-428P-201ENST00000362942 RFC5P40937 340 aa5.61□□□□□ -1.51
RNU6-428P-201ENST00000362942 QPCTQ16769 361 aa5.61□□□□□ -1.51
RNU6-428P-201ENST00000362942 BANK1Q8NDB2 785 aa5.61□□□□□ -1.51
RNU6-428P-201ENST00000362942 CABLES1Q8TDN4 633 aa5.61□□□□□ -1.51
RNU6-428P-201ENST00000362942 ZNF516Q92618 1163 aa5.61□□□□□ -1.51
RNU6-428P-201ENST00000362942 JUNDP17535 347 aa5.6□□□□□ -1.51
RNU6-428P-201ENST00000362942 SYMPKQ92797 1274 aaKnown RBP5.6□□□□□ -1.51
RNU6-428P-201ENST00000362942 PRM3Q9NNZ6 103 aa5.6□□□□□ -1.51
RNU6-428P-201ENST00000362942 PLA2G2EQ9NZK7 142 aa5.6□□□□□ -1.51
RNU6-428P-201ENST00000362942 TLL1O43897 1013 aa5.59□□□□□ -1.51
RNU6-428P-201ENST00000362942 AP1G2O75843 785 aa5.59□□□□□ -1.51
RNU6-428P-201ENST00000362942 FLIIQ13045 1269 aa5.59□□□□□ -1.51
RNU6-428P-201ENST00000362942 RTL5Q5HYW3 569 aaPredicted RBP5.59□□□□□ -1.51
RNU6-428P-201ENST00000362942 ERICH6Q7L0X2 663 aa5.59□□□□□ -1.51
RNU6-428P-201ENST00000362942 PNMA1Q8ND90 353 aa5.59□□□□□ -1.51
RNU6-428P-201ENST00000362942 GTF3C3Q9Y5Q9 886 aa5.59□□□□□ -1.51
RNU6-428P-201ENST00000362942 MMP16P51512 607 aa5.58□□□□□ -1.52
RNU6-428P-201ENST00000362942 PTPRNQ16849 979 aa5.58□□□□□ -1.52
RNU6-428P-201ENST00000362942 CFAP99D6REC4 459 aa5.57□□□□□ -1.52
RNU6-428P-201ENST00000362942 DXOO77932 396 aaKnown RBP5.57□□□□□ -1.52
RNU6-428P-201ENST00000362942 FAM160A2Q8N612 972 aaPredicted RBP5.57□□□□□ -1.52
RNU6-428P-201ENST00000362942 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.57□□□□□ -1.52
RNU6-428P-201ENST00000362942 SOCS7O14512 581 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 ZBTB24O43167 697 aaPredicted RBP5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 S1PR4O95977 384 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 USP17L8P0C7I0 530 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 CCNYL3P0C7X3 344 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 LYPD8Q6UX82 237 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 ANKLE1Q8NAG6 615 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 NKX2-3Q8TAU0 364 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 NUDT12Q9BQG2 462 aa5.56□□□□□ -1.52
RNU6-428P-201ENST00000362942 PPP1R18Q6NYC8 613 aa5.55□□□□□ -1.52
RNU6-428P-201ENST00000362942 ARMC2Q8NEN0 867 aa5.55□□□□□ -1.52
RNU6-428P-201ENST00000362942 CTHP32929 405 aa5.54□□□□□ -1.52
RNU6-428P-201ENST00000362942 CTDSPL2Q05D32 466 aa5.54□□□□□ -1.52
RNU6-428P-201ENST00000362942 CCDC24Q8N4L8 307 aa5.54□□□□□ -1.52
RNU6-428P-201ENST00000362942 PRDM9Q9NQV7 894 aa5.54□□□□□ -1.52
RNU6-428P-201ENST00000362942 A0A0G2JS52 829 aa5.53□□□□□ -1.52
RNU6-428P-201ENST00000362942 KCNH2Q12809 1159 aa5.53□□□□□ -1.52
RNU6-428P-201ENST00000362942 WWC1Q8IX03 1113 aa5.53□□□□□ -1.52
RNU6-428P-201ENST00000362942 EVA1BQ9NVM1 165 aa5.53□□□□□ -1.52
RNU6-428P-201ENST00000362942 FCF1Q9Y324 198 aaKnown RBP5.53□□□□□ -1.52
RNU6-428P-201ENST00000362942 RNF223E7ERA6 249 aa5.52□□□□□ -1.53
RNU6-428P-201ENST00000362942 RAD21O60216 631 aa5.52□□□□□ -1.53
RNU6-428P-201ENST00000362942 ZC3H4Q9UPT8 1303 aaKnown RBP5.51□□□□□ -1.53
RNU6-428P-201ENST00000362942 UBTFP17480 764 aaKnown RBP5.51□□□□□ -1.53
RNU6-428P-201ENST00000362942 RPIAP49247 311 aa5.51□□□□□ -1.53
RNU6-428P-201ENST00000362942 NBPF14Q5TI25 921 aa5.51□□□□□ -1.53
RNU6-428P-201ENST00000362942 FBXO31Q5XUX0 539 aaPredicted RBP5.51□□□□□ -1.53
RNU6-428P-201ENST00000362942 GPKOWQ92917 476 aaPredicted RBP eCLIP5.51□□□□□ -1.53
RNU6-428P-201ENST00000362942 NDUFB9Q9Y6M9 179 aa5.51□□□□□ -1.53
RNU6-428P-201ENST00000362942 PPEF1O14829 653 aaPredicted RBP5.5□□□□□ -1.53
RNU6-428P-201ENST00000362942 PER1O15534 1290 aaPredicted RBP5.5□□□□□ -1.53
RNU6-428P-201ENST00000362942 RGS20O76081 388 aa5.5□□□□□ -1.53
RNU6-428P-201ENST00000362942 F12P00748 615 aaPredicted RBP5.5□□□□□ -1.53
RNU6-428P-201ENST00000362942 MCM6Q14566 821 aa5.5□□□□□ -1.53
RNU6-428P-201ENST00000362942 LRRN4Q8WUT4 740 aa5.5□□□□□ -1.53
RNU6-428P-201ENST00000362942 CD2BP2O95400 341 aaKnown RBP5.49□□□□□ -1.53
RNU6-428P-201ENST00000362942 UNC93B1Q9H1C4 597 aa5.49□□□□□ -1.53
RNU6-428P-201ENST00000362942 SNRKQ9NRH2 765 aa5.49□□□□□ -1.53
RNU6-428P-201ENST00000362942 NR6A1Q15406 480 aa5.48□□□□□ -1.53
RNU6-428P-201ENST00000362942 MTMR14Q8NCE2 650 aa5.48□□□□□ -1.53
RNU6-428P-201ENST00000362942 ZNF592Q92610 1267 aa5.48□□□□□ -1.53
RNU6-428P-201ENST00000362942 MAP10Q9P2G4 905 aa5.48□□□□□ -1.53
RNU6-428P-201ENST00000362942 FKBPLQ9UIM3 349 aa5.48□□□□□ -1.53
RNU6-428P-201ENST00000362942 ZNF330Q9Y3S2 320 aaPredicted RBP5.48□□□□□ -1.53
RNU6-428P-201ENST00000362942 V9GY48 417 aaPredicted RBP5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms