RNA–Protein interactions for RNA: ENST00000362700.1

RNU6-228P-201, Transcript of RNA, U6 small nuclear 228, pseudogene, humanhuman

BASIC

Gene RNU6-228P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-228P-201ENST00000362700 WHAMMQ8TF30 809 aa4.3□□□□□ -1.72
RNU6-228P-201ENST00000362700 FCF1Q9Y324 198 aaKnown RBP4.3□□□□□ -1.72
RNU6-228P-201ENST00000362700 C3orf80F5H4A9 247 aa4.29□□□□□ -1.72
RNU6-228P-201ENST00000362700 NBPF11Q86T75 865 aa4.29□□□□□ -1.72
RNU6-228P-201ENST00000362700 REPIN1Q9BWE0 567 aaKnown RBP4.29□□□□□ -1.72
RNU6-228P-201ENST00000362700 CRISPLD2Q9H0B8 497 aa4.29□□□□□ -1.72
RNU6-228P-201ENST00000362700 PPFIA3O75145 1194 aa4.28□□□□□ -1.72
RNU6-228P-201ENST00000362700 NUDT18Q6ZVK8 323 aa4.28□□□□□ -1.72
RNU6-228P-201ENST00000362700 FAM198AQ9UFP1 575 aa4.28□□□□□ -1.72
RNU6-228P-201ENST00000362700 SOBPA7XYQ1 873 aa4.26□□□□□ -1.73
RNU6-228P-201ENST00000362700 MAP3K7O43318 606 aa4.26□□□□□ -1.73
RNU6-228P-201ENST00000362700 MAP3K10Q02779 954 aa4.26□□□□□ -1.73
RNU6-228P-201ENST00000362700 FZD5Q13467 585 aa4.26□□□□□ -1.73
RNU6-228P-201ENST00000362700 KMT5BQ4FZB7 885 aa4.26□□□□□ -1.73
RNU6-228P-201ENST00000362700 COL25A1Q9BXS0 654 aaPredicted RBP4.26□□□□□ -1.73
RNU6-228P-201ENST00000362700 ACTN4O43707 911 aaKnown RBP4.25□□□□□ -1.73
RNU6-228P-201ENST00000362700 SPSB2Q99619 263 aa4.25□□□□□ -1.73
RNU6-228P-201ENST00000362700 ZFP64Q9NPA5 681 aa4.25□□□□□ -1.73
RNU6-228P-201ENST00000362700 TXKP42681 527 aa4.24□□□□□ -1.73
RNU6-228P-201ENST00000362700 SCARF1Q14162 830 aa4.24□□□□□ -1.73
RNU6-228P-201ENST00000362700 TSR1Q2NL82 804 aaKnown RBP4.24□□□□□ -1.73
RNU6-228P-201ENST00000362700 PODNQ7Z5L7 613 aa4.24□□□□□ -1.73
RNU6-228P-201ENST00000362700 GPR161Q8N6U8 529 aaKnown RBP4.24□□□□□ -1.73
RNU6-228P-201ENST00000362700 CERKQ8TCT0 537 aa4.24□□□□□ -1.73
RNU6-228P-201ENST00000362700 ALDH1A1P00352 501 aa4.23□□□□□ -1.73
RNU6-228P-201ENST00000362700 ENAMQ9NRM1 1142 aa4.23□□□□□ -1.73
RNU6-228P-201ENST00000362700 EN1Q05925 392 aaPredicted RBP4.22□□□□□ -1.73
RNU6-228P-201ENST00000362700 BEND7Q8N7W2 519 aaPredicted RBP4.22□□□□□ -1.73
RNU6-228P-201ENST00000362700 CNTNAP5Q8WYK1 1306 aa4.21□□□□□ -1.73
RNU6-228P-201ENST00000362700 MAN1A2O60476 641 aa4.21□□□□□ -1.74
RNU6-228P-201ENST00000362700 PDE4AP27815 886 aa4.21□□□□□ -1.74
RNU6-228P-201ENST00000362700 TRIM32Q13049 653 aa4.21□□□□□ -1.74
RNU6-228P-201ENST00000362700 ARTNQ5T4W7 220 aa4.2□□□□□ -1.74
RNU6-228P-201ENST00000362700 ITGB7P26010 798 aa4.19□□□□□ -1.74
RNU6-228P-201ENST00000362700 RNFT1Q5M7Z0 435 aa4.19□□□□□ -1.74
RNU6-228P-201ENST00000362700 MRPL14Q6P1L8 145 aaKnown RBP4.19□□□□□ -1.74
RNU6-228P-201ENST00000362700 SCUBE3Q8IX30 993 aa4.19□□□□□ -1.74
RNU6-228P-201ENST00000362700 PURBQ96QR8 312 aaKnown RBP4.19□□□□□ -1.74
RNU6-228P-201ENST00000362700 SEMA6BQ9H3T3 888 aa4.19□□□□□ -1.74
RNU6-228P-201ENST00000362700 EMILIN3Q9NT22 766 aa4.19□□□□□ -1.74
RNU6-228P-201ENST00000362700 DDX12PQ92771 950 aa4.18□□□□□ -1.74
RNU6-228P-201ENST00000362700 WASF2Q9Y6W5 498 aa4.18□□□□□ -1.74
RNU6-228P-201ENST00000362700 PAX4O43316 350 aa4.17□□□□□ -1.74
RNU6-228P-201ENST00000362700 NBR1Q14596 966 aa4.17□□□□□ -1.74
RNU6-228P-201ENST00000362700 DDX27Q96GQ7 796 aaKnown RBP4.17□□□□□ -1.74
RNU6-228P-201ENST00000362700 CFHP08603 1231 aa4.16□□□□□ -1.74
RNU6-228P-201ENST00000362700 RC3H1Q5TC82 1133 aaKnown RBP4.16□□□□□ -1.74
RNU6-228P-201ENST00000362700 LYPD4Q6UWN0 246 aa4.16□□□□□ -1.74
RNU6-228P-201ENST00000362700 KRBA1A5PL33 1030 aa4.15□□□□□ -1.75
RNU6-228P-201ENST00000362700 RBM27Q9P2N5 1060 aaKnown RBP4.15□□□□□ -1.75
RNU6-228P-201ENST00000362700 NCKAP5LQ9HCH0 1330 aa4.15□□□□□ -1.75
RNU6-228P-201ENST00000362700 ADAMTS2O95450 1211 aa4.13□□□□□ -1.75
RNU6-228P-201ENST00000362700 CELA2BP08218 269 aaPredicted RBP4.13□□□□□ -1.75
RNU6-228P-201ENST00000362700 LARP6Q9BRS8 491 aaKnown RBP4.13□□□□□ -1.75
RNU6-228P-201ENST00000362700 MCTP1Q6DN14 999 aa4.12□□□□□ -1.75
RNU6-228P-201ENST00000362700 ALYREFQ86V81 257 aaKnown RBP4.12□□□□□ -1.75
RNU6-228P-201ENST00000362700 NANOS1Q8WY41 292 aaKnown RBP4.12□□□□□ -1.75
RNU6-228P-201ENST00000362700 FOXD4L6Q3SYB3 417 aaPredicted RBP4.11□□□□□ -1.75
RNU6-228P-201ENST00000362700 FOXD4L3Q6VB84 417 aaPredicted RBP4.11□□□□□ -1.75
RNU6-228P-201ENST00000362700 NEDD1Q8NHV4 660 aa4.1□□□□□ -1.75
RNU6-228P-201ENST00000362700 WNT7BP56706 349 aa4.09□□□□□ -1.75
RNU6-228P-201ENST00000362700 PUS10Q3MIT2 529 aaKnown RBP4.08□□□□□ -1.76
RNU6-228P-201ENST00000362700 FAM160A2Q8N612 972 aaPredicted RBP4.08□□□□□ -1.76
RNU6-228P-201ENST00000362700 SRSF11Q05519 484 aaKnown RBP4.07□□□□□ -1.76
RNU6-228P-201ENST00000362700 FMNL2Q96PY5 1086 aa4.07□□□□□ -1.76
RNU6-228P-201ENST00000362700 PRDM9Q9NQV7 894 aa4.07□□□□□ -1.76
RNU6-228P-201ENST00000362700 EYA1Q99502 592 aa4.06□□□□□ -1.76
RNU6-228P-201ENST00000362700 FMNL1O95466 1100 aaPredicted RBP4.05□□□□□ -1.76
RNU6-228P-201ENST00000362700 SKOR1P84550 965 aa4.05□□□□□ -1.76
RNU6-228P-201ENST00000362700 DOC2BQ14184 412 aa4.05□□□□□ -1.76
RNU6-228P-201ENST00000362700 MFSD10Q14728 455 aa4.05□□□□□ -1.76
RNU6-228P-201ENST00000362700 C6orf118Q5T5N4 469 aa4.05□□□□□ -1.76
RNU6-228P-201ENST00000362700 SV2AQ7L0J3 742 aa4.05□□□□□ -1.76
RNU6-228P-201ENST00000362700 CDC14CA4D256 554 aa4.04□□□□□ -1.76
RNU6-228P-201ENST00000362700 DNAJB2P25686 324 aa4.04□□□□□ -1.76
RNU6-228P-201ENST00000362700 VWA5B2Q8N398 1253 aa4.04□□□□□ -1.76
RNU6-228P-201ENST00000362700 EHBP1Q8NDI1 1231 aa4.04□□□□□ -1.76
RNU6-228P-201ENST00000362700 DPYSL4O14531 572 aa4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 SIAH2O43255 324 aa4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 FECHP22830 423 aa4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 LRP8Q14114 963 aa4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 PADI6Q6TGC4 694 aa4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 TTC13Q8NBP0 860 aa4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 CCER1Q8TC90 406 aaPredicted RBP4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 THAP11Q96EK4 314 aa4.03□□□□□ -1.76
RNU6-228P-201ENST00000362700 C1QTNF9BB2RNN3 333 aa4.02□□□□□ -1.77
RNU6-228P-201ENST00000362700 PTSQ03393 145 aa4.02□□□□□ -1.77
RNU6-228P-201ENST00000362700 SH3RF1Q7Z6J0 888 aa4.02□□□□□ -1.77
RNU6-228P-201ENST00000362700 DNMT3LQ9UJW3 386 aa4.02□□□□□ -1.77
RNU6-228P-201ENST00000362700 ADH1CP00326 375 aa4.01□□□□□ -1.77
RNU6-228P-201ENST00000362700 BCRP11274 1271 aa4.01□□□□□ -1.77
RNU6-228P-201ENST00000362700 BMP2P12643 396 aa4.01□□□□□ -1.77
RNU6-228P-201ENST00000362700 WDR4P57081 412 aaKnown RBP4.01□□□□□ -1.77
RNU6-228P-201ENST00000362700 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.01□□□□□ -1.77
RNU6-228P-201ENST00000362700 CCDC155Q8N6L0 562 aa4.01□□□□□ -1.77
RNU6-228P-201ENST00000362700 TMEM134Q9H6X4 195 aa4.01□□□□□ -1.77
RNU6-228P-201ENST00000362700 COL17A1Q9UMD9 1497 aaPredicted RBP4□□□□□ -1.77
RNU6-228P-201ENST00000362700 UPP2O95045 317 aa4□□□□□ -1.77
RNU6-228P-201ENST00000362700 TIMP2P16035 220 aa4□□□□□ -1.77
RNU6-228P-201ENST00000362700 MSS51Q4VC12 460 aa4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms