RNA–Protein interactions for RNA: ENST00000361796.9

CTNND1-204, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,226 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-204ENST00000361796 SMARCA2P51531 1590 aa9.77□□□□□ -0.85
CTNND1-204ENST00000361796 ERICH2A1L162 156 aa9.77□□□□□ -0.85
CTNND1-204ENST00000361796 STK11IPQ8N1F8 1099 aa9.77□□□□□ -0.85
CTNND1-204ENST00000361796 R3HCC1Q9Y3T6 440 aaKnown RBP9.77□□□□□ -0.85
CTNND1-204ENST00000361796 NFKBIBQ15653 356 aa9.77□□□□□ -0.85
CTNND1-204ENST00000361796 CDCA7LQ96GN5 454 aa9.77□□□□□ -0.85
CTNND1-204ENST00000361796 GPS2Q13227 327 aa9.76□□□□□ -0.85
CTNND1-204ENST00000361796 API5Q9BZZ5 524 aaKnown RBP9.76□□□□□ -0.85
CTNND1-204ENST00000361796 KIF7Q2M1P5 1343 aa9.76□□□□□ -0.85
CTNND1-204ENST00000361796 IPO7O95373 1038 aaKnown RBP9.76□□□□□ -0.85
CTNND1-204ENST00000361796 RNF20Q5VTR2 975 aa9.76□□□□□ -0.85
CTNND1-204ENST00000361796 TOP2AP11388 1531 aaKnown RBP9.76□□□□□ -0.85
CTNND1-204ENST00000361796 CYB5RLQ6IPT4 315 aa9.76□□□□□ -0.85
CTNND1-204ENST00000361796 DNAJC2Q99543 621 aaKnown RBP9.76□□□□□ -0.85
CTNND1-204ENST00000361796 DDX58O95786 925 aaKnown RBP9.75□□□□□ -0.85
CTNND1-204ENST00000361796 FANCIQ9NVI1 1328 aa9.75□□□□□ -0.85
CTNND1-204ENST00000361796 CEBPZQ03701 1054 aaKnown RBP9.75□□□□□ -0.85
CTNND1-204ENST00000361796 ANKRD20A12PQ8NF67 263 aa9.75□□□□□ -0.85
CTNND1-204ENST00000361796 PRDM2Q13029 1718 aa9.75□□□□□ -0.85
CTNND1-204ENST00000361796 MAP4K4O95819 1239 aaPredicted RBP9.75□□□□□ -0.85
CTNND1-204ENST00000361796 RSPH4AQ5TD94 716 aa9.75□□□□□ -0.85
CTNND1-204ENST00000361796 LRRFIP1Q32MZ4 808 aaKnown RBP9.75□□□□□ -0.85
CTNND1-204ENST00000361796 MPNDQ8N594 471 aa9.75□□□□□ -0.85
CTNND1-204ENST00000361796 CCDC47Q96A33 483 aaKnown RBP9.75□□□□□ -0.85
CTNND1-204ENST00000361796 PPM1FP49593 454 aaPredicted RBP9.74□□□□□ -0.85
CTNND1-204ENST00000361796 FAM43AQ8N2R8 423 aa9.74□□□□□ -0.85
CTNND1-204ENST00000361796 ATP2B1P20020 1258 aa9.74□□□□□ -0.85
CTNND1-204ENST00000361796 PIP4K2BP78356 416 aa9.74□□□□□ -0.85
CTNND1-204ENST00000361796 CCDC43Q96MW1 224 aaKnown RBP9.74□□□□□ -0.85
CTNND1-204ENST00000361796 ADAMTS8Q9UP79 889 aa9.74□□□□□ -0.85
CTNND1-204ENST00000361796 ROCK1Q13464 1354 aa9.74□□□□□ -0.85
CTNND1-204ENST00000361796 CAVIN1Q6NZI2 390 aaKnown RBP9.74□□□□□ -0.85
CTNND1-204ENST00000361796 CCDC73Q6ZRK6 1079 aa9.74□□□□□ -0.85
CTNND1-204ENST00000361796 HOOK1Q9UJC3 728 aaKnown RBP9.73□□□□□ -0.85
CTNND1-204ENST00000361796 UBTFL1P0CB47 393 aaPredicted RBP9.73□□□□□ -0.85
CTNND1-204ENST00000361796 MNS1Q8NEH6 495 aa9.73□□□□□ -0.85
CTNND1-204ENST00000361796 CCDC7Q96M83 1385 aa9.73□□□□□ -0.85
CTNND1-204ENST00000361796 RBM33Q96EV2 1170 aaKnown RBP9.73□□□□□ -0.85
CTNND1-204ENST00000361796 NASPP49321 788 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-204ENST00000361796 RALYLQ86SE5 291 aaKnown RBP9.72□□□□□ -0.85
CTNND1-204ENST00000361796 FSD1Q9BTV5 496 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 NLRP2Q9NX02 1062 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 CDC45O75419 566 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 FMNL2Q96PY5 1086 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 ERC2O15083 957 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 BRPF3Q9ULD4 1205 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 GNAI1P63096 354 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.72□□□□□ -0.85
CTNND1-204ENST00000361796 RUFY1Q96T51 708 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 TEX35Q5T0J7 233 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 SPC24Q8NBT2 197 aa9.72□□□□□ -0.85
CTNND1-204ENST00000361796 BRPF1P55201 1214 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-204ENST00000361796 CHMP4CQ96CF2 233 aa9.71□□□□□ -0.85
CTNND1-204ENST00000361796 NUCB2P80303 420 aa9.71□□□□□ -0.85
CTNND1-204ENST00000361796 STK3Q13188 491 aa9.71□□□□□ -0.85
CTNND1-204ENST00000361796 CT47A1Q5JQC4 288 aaPredicted RBP9.71□□□□□ -0.85
CTNND1-204ENST00000361796 PRPF40AO75400 957 aaKnown RBP9.71□□□□□ -0.85
CTNND1-204ENST00000361796 SMC2O95347 1197 aa9.71□□□□□ -0.85
CTNND1-204ENST00000361796 RBM10P98175 930 aaKnown RBP9.71□□□□□ -0.85
CTNND1-204ENST00000361796 SAFBQ15424 915 aaKnown RBP eCLIP9.71□□□□□ -0.85
CTNND1-204ENST00000361796 RRP12Q5JTH9 1297 aaKnown RBP9.71□□□□□ -0.85
CTNND1-204ENST00000361796 ZFYVE27Q5T4F4 411 aa9.71□□□□□ -0.85
CTNND1-204ENST00000361796 CAGE1Q8TC20 777 aa9.71□□□□□ -0.86
CTNND1-204ENST00000361796 TSR2Q969E8 191 aaKnown RBP9.71□□□□□ -0.86
CTNND1-204ENST00000361796 EPS15P42566 896 aa9.71□□□□□ -0.86
CTNND1-204ENST00000361796 IKQ13123 557 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-204ENST00000361796 RAPGEF4Q8WZA2 1011 aa9.7□□□□□ -0.86
CTNND1-204ENST00000361796 IBSPP21815 317 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-204ENST00000361796 MTHFSP49914 203 aa9.7□□□□□ -0.86
CTNND1-204ENST00000361796 PTPRGP23470 1445 aa9.7□□□□□ -0.86
CTNND1-204ENST00000361796 CNTLNQ9NXG0 1405 aa9.7□□□□□ -0.86
CTNND1-204ENST00000361796 NUTM2BA6NNL0 878 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-204ENST00000361796 NUTM2EB1AL46 878 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-204ENST00000361796 OLFM4Q6UX06 510 aa9.7□□□□□ -0.86
CTNND1-204ENST00000361796 NUTM2AQ8IVF1 878 aaPredicted RBP9.7□□□□□ -0.86
CTNND1-204ENST00000361796 PAF1Q8N7H5 531 aa9.7□□□□□ -0.86
CTNND1-204ENST00000361796 SURF6O75683 361 aaKnown RBP9.69□□□□□ -0.86
CTNND1-204ENST00000361796 DHX37Q8IY37 1157 aaKnown RBP9.69□□□□□ -0.86
CTNND1-204ENST00000361796 CNTROBQ8N137 903 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 SDF4Q9BRK5 362 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.69□□□□□ -0.861e-6■■■■■ 38.5
CTNND1-204ENST00000361796 PDZRN3Q9UPQ7 1066 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 NINLQ9Y2I6 1382 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 TRAK2O60296 914 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 BCAR3O75815 825 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 NOB1Q9ULX3 412 aaKnown RBP9.69□□□□□ -0.86
CTNND1-204ENST00000361796 SIL1Q9H173 461 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 WASHC2AQ641Q2 1341 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 EXOSC9Q06265 439 aaKnown RBP9.69□□□□□ -0.86
CTNND1-204ENST00000361796 FIBPO43427 364 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 HSP90AB2PQ58FF8 381 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 TRIM5Q9C035 493 aa9.69□□□□□ -0.86
CTNND1-204ENST00000361796 NEK4P51957 841 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 CADPSQ9ULU8 1353 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 CCDC39Q9UFE4 941 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 AKNAQ7Z591 1439 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 AK7Q96M32 723 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 RBM42Q9BTD8 480 aaKnown RBP9.68□□□□□ -0.86
CTNND1-204ENST00000361796 NLRP6P59044 892 aa9.68□□□□□ -0.86
CTNND1-204ENST00000361796 ODF2Q5BJF6 829 aa9.68□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms