RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 SHANK2Q9UPX8 1470 aa11.43□□□□□ -0.58
CALD1-201ENST00000361675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.43□□□□□ -0.584e-7■■■■□ 20
CALD1-201ENST00000361675 ABCC2Q92887 1545 aa11.43□□□□□ -0.58
CALD1-201ENST00000361675 NPM1P06748 294 aaKnown RBP eCLIP11.42□□□□□ -0.58
CALD1-201ENST00000361675 MRE11P49959 708 aa11.42□□□□□ -0.58
CALD1-201ENST00000361675 ARHGAP5Q13017 1502 aa11.42□□□□□ -0.58
CALD1-201ENST00000361675 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
CALD1-201ENST00000361675 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.42□□□□□ -0.58
CALD1-201ENST00000361675 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
CALD1-201ENST00000361675 CCDC141Q6ZP82 1450 aa11.41□□□□□ -0.58
CALD1-201ENST00000361675 BCORL1Q5H9F3 1711 aa11.41□□□□□ -0.58
CALD1-201ENST00000361675 ERBB4Q15303 1308 aa11.41□□□□□ -0.58
CALD1-201ENST00000361675 ARHGEF5Q12774 1597 aa11.41□□□□□ -0.58
CALD1-201ENST00000361675 ZBTB9Q96C00 473 aa11.41□□□□□ -0.58
CALD1-201ENST00000361675 GRPEL1Q9HAV7 217 aa11.41□□□□□ -0.58
CALD1-201ENST00000361675 CNTLNQ9NXG0 1405 aa11.4□□□□□ -0.59
CALD1-201ENST00000361675 PLEKHH2Q8IVE3 1493 aa11.39□□□□□ -0.59
CALD1-201ENST00000361675 ZCCHC11Q5TAX3 1644 aaKnown RBP11.39□□□□□ -0.59
CALD1-201ENST00000361675 CENPJQ9HC77 1338 aaPredicted RBP11.39□□□□□ -0.59
CALD1-201ENST00000361675 PHF14O94880 888 aa11.39□□□□□ -0.59
CALD1-201ENST00000361675 TRERF1Q96PN7 1200 aa11.39□□□□□ -0.59
CALD1-201ENST00000361675 PLA2R1Q13018 1463 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 RCAN3Q9UKA8 241 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 TRAK2O60296 914 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 RRP1P56182 461 aaKnown RBP11.38□□□□□ -0.59
CALD1-201ENST00000361675 FAM161AQ3B820 660 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 RGL3Q3MIN7 710 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 ARMCX6Q7L4S7 300 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 PRKRIP1Q9H875 184 aaPredicted RBP11.38□□□□□ -0.59
CALD1-201ENST00000361675 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
CALD1-201ENST00000361675 TMEM51Q9NW97 253 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 USP47Q96K76 1375 aa11.38□□□□□ -0.59
CALD1-201ENST00000361675 ARID4AP29374 1257 aaPredicted RBP11.37□□□□□ -0.59
CALD1-201ENST00000361675 XPCQ01831 940 aaPredicted RBP11.37□□□□□ -0.59
CALD1-201ENST00000361675 AFAP1Q8N556 730 aa11.37□□□□□ -0.59
CALD1-201ENST00000361675 FAM135AQ9P2D6 1515 aa11.37□□□□□ -0.59
CALD1-201ENST00000361675 TRAPPC8Q9Y2L5 1435 aa11.37□□□□□ -0.59
CALD1-201ENST00000361675 TNNT3P45378 269 aaPredicted RBP11.37□□□□□ -0.59
CALD1-201ENST00000361675 KDM5DQ9BY66 1539 aa11.37□□□□□ -0.59
CALD1-201ENST00000361675 SPDYE4A6NLX3 237 aa11.36□□□□□ -0.59
CALD1-201ENST00000361675 KCNJ4P48050 445 aa11.36□□□□□ -0.59
CALD1-201ENST00000361675 RIPK4P57078 832 aa11.35□□□□□ -0.59
CALD1-201ENST00000361675 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP11.35□□□□□ -0.59
CALD1-201ENST00000361675 NBPF1Q3BBV0 1214 aa11.35□□□□□ -0.59
CALD1-201ENST00000361675 DMTNQ08495 405 aa11.35□□□□□ -0.59
CALD1-201ENST00000361675 MYO5CQ9NQX4 1742 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 PLCH2O75038 1416 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 ST20-MTHFSA0A0A6YYL1 179 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 POLD1P28340 1107 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 PIK3R5Q8WYR1 880 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 KDM5CP41229 1560 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 CHMP4CQ96CF2 233 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 CRBNQ96SW2 442 aa11.34□□□□□ -0.59
CALD1-201ENST00000361675 DHX29Q7Z478 1369 aaKnown RBP11.33□□□□□ -0.6
CALD1-201ENST00000361675 CARD11Q9BXL7 1154 aa11.33□□□□□ -0.6
CALD1-201ENST00000361675 MTERF4Q7Z6M4 381 aaKnown RBP11.33□□□□□ -0.6
CALD1-201ENST00000361675 UHRF1BP1Q6BDS2 1440 aa11.32□□□□□ -0.6
CALD1-201ENST00000361675 AXDND1Q5T1B0 1012 aaPredicted RBP11.32□□□□□ -0.6
CALD1-201ENST00000361675 TSC1Q92574 1164 aa11.32□□□□□ -0.6
CALD1-201ENST00000361675 C1orf115Q9H7X2 142 aa11.32□□□□□ -0.6
CALD1-201ENST00000361675 FAM177BA6PVY3 158 aa11.31□□□□□ -0.6
CALD1-201ENST00000361675 ZSCAN30Q86W11 494 aa11.31□□□□□ -0.6
CALD1-201ENST00000361675 NOL8Q76FK4 1167 aaKnown RBP11.31□□□□□ -0.6
CALD1-201ENST00000361675 MCM4P33991 863 aa11.3□□□□□ -0.6
CALD1-201ENST00000361675 EFCAB2Q5VUJ9 269 aa11.3□□□□□ -0.6
CALD1-201ENST00000361675 UHRF1BP1LA0JNW5 1464 aa11.3□□□□□ -0.6
CALD1-201ENST00000361675 MAST1Q9Y2H9 1570 aa11.3□□□□□ -0.6
CALD1-201ENST00000361675 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
CALD1-201ENST00000361675 CC2D2BQ6DHV5 1058 aa11.3□□□□□ -0.6
CALD1-201ENST00000361675 SLC52A1Q9NWF4 448 aa11.3□□□□□ -0.6
CALD1-201ENST00000361675 TMTC2Q8N394 836 aa11.29□□□□□ -0.6
CALD1-201ENST00000361675 UNC13BO14795 1591 aa11.29□□□□□ -0.6
CALD1-201ENST00000361675 OFD1O75665 1012 aa11.29□□□□□ -0.6
CALD1-201ENST00000361675 ABCC1P33527 1531 aa11.29□□□□□ -0.6
CALD1-201ENST00000361675 APBB1O00213 710 aa11.28□□□□□ -0.6
CALD1-201ENST00000361675 NASPP49321 788 aaPredicted RBP11.28□□□□□ -0.6
CALD1-201ENST00000361675 CCDC94Q9BW85 323 aaPredicted RBP11.28□□□□□ -0.6
CALD1-201ENST00000361675 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
CALD1-201ENST00000361675 A2MP01023 1474 aa11.28□□□□□ -0.6
CALD1-201ENST00000361675 CCDC144AA2RUR9 1427 aa11.28□□□□□ -0.6
CALD1-201ENST00000361675 POLR1AO95602 1720 aaPredicted RBP11.28□□□□□ -0.6
CALD1-201ENST00000361675 LETM1O95202 739 aaPredicted RBP11.27□□□□□ -0.6
CALD1-201ENST00000361675 KIF20AO95235 890 aa11.27□□□□□ -0.6
CALD1-201ENST00000361675 PLXNC1O60486 1568 aa11.27□□□□□ -0.61
CALD1-201ENST00000361675 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.61
CALD1-201ENST00000361675 ERICH4A6NGS2 130 aa11.27□□□□□ -0.61
CALD1-201ENST00000361675 ROCK2O75116 1388 aaKnown RBP11.27□□□□□ -0.61
CALD1-201ENST00000361675 ZSCAN20P17040 1043 aaPredicted RBP11.26□□□□□ -0.61
CALD1-201ENST00000361675 NGEFQ8N5V2 710 aa11.26□□□□□ -0.61
CALD1-201ENST00000361675 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
CALD1-201ENST00000361675 SEMA3FQ13275 785 aa11.26□□□□□ -0.61
CALD1-201ENST00000361675 TRIM34Q9BYJ4 488 aa11.26□□□□□ -0.61
CALD1-201ENST00000361675 SPAG9O60271 1321 aaKnown RBP11.26□□□□□ -0.61
CALD1-201ENST00000361675 ZNF513Q8N8E2 541 aaPredicted RBP11.26□□□□□ -0.61
CALD1-201ENST00000361675 UTP14CQ5TAP6 766 aaKnown RBP11.25□□□□□ -0.61
CALD1-201ENST00000361675 IQGAP3Q86VI3 1631 aa11.25□□□□□ -0.61
CALD1-201ENST00000361675 DUOX2Q9NRD8 1548 aa11.25□□□□□ -0.61
CALD1-201ENST00000361675 JARID2Q92833 1246 aaPredicted RBP11.25□□□□□ -0.61
CALD1-201ENST00000361675 GOLIM4O00461 696 aa11.24□□□□□ -0.61
CALD1-201ENST00000361675 SMG6Q86US8 1419 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms