RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 ERVK-7P63135 1459 aa12.6□□□□□ -0.39
TRAPPC2-201ENST00000359680 BCL2L13Q9BXK5 485 aa12.6□□□□□ -0.39
TRAPPC2-201ENST00000359680 C22orf23Q9BZE7 217 aa12.59□□□□□ -0.39
TRAPPC2-201ENST00000359680 TNNQ9UQP3 1299 aa12.59□□□□□ -0.39
TRAPPC2-201ENST00000359680 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
TRAPPC2-201ENST00000359680 TCP11L2Q8N4U5 519 aa12.59□□□□□ -0.39
TRAPPC2-201ENST00000359680 TRAK2O60296 914 aa12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 CLCN1P35523 988 aa12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 GLIPR1L2Q4G1C9 344 aa12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 MORC1Q86VD1 984 aa12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 PANK2Q9BZ23 570 aa12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 MRE11P49959 708 aa12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 MFAP1P55081 439 aaKnown RBP12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 PTPRTO14522 1441 aa12.58□□□□□ -0.4
TRAPPC2-201ENST00000359680 SHPRHQ149N8 1683 aa12.57□□□□□ -0.4
TRAPPC2-201ENST00000359680 FTSJ3Q8IY81 847 aaKnown RBP12.57□□□□□ -0.4
TRAPPC2-201ENST00000359680 TNNT2P45379 298 aaPredicted RBP12.57□□□□□ -0.4
TRAPPC2-201ENST00000359680 MVPQ14764 893 aaKnown RBP12.57□□□□□ -0.4
TRAPPC2-201ENST00000359680 CFAP70Q5T0N1 1121 aa12.57□□□□□ -0.4
TRAPPC2-201ENST00000359680 EFCAB2Q5VUJ9 269 aa12.57□□□□□ -0.4
TRAPPC2-201ENST00000359680 SHROOM2Q13796 1616 aa12.57□□□□□ -0.4
TRAPPC2-201ENST00000359680 HSCBQ8IWL3 235 aa12.56□□□□□ -0.4
TRAPPC2-201ENST00000359680 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
TRAPPC2-201ENST00000359680 DDX11L8A8MPP1 907 aa12.56□□□□□ -0.4
TRAPPC2-201ENST00000359680 IQSEC2Q5JU85 1478 aa12.56□□□□□ -0.4
TRAPPC2-201ENST00000359680 ZKSCAN2Q63HK3 967 aa12.55□□□□□ -0.4
TRAPPC2-201ENST00000359680 NSD3Q9BZ95 1437 aa12.55□□□□□ -0.4
TRAPPC2-201ENST00000359680 SPAG9O60271 1321 aaKnown RBP12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 PLCH2O75038 1416 aa12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 ABCA6Q8N139 1617 aa12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 MAP3K4Q9Y6R4 1608 aa12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 TET3O43151 1660 aa12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 DZIP1LQ8IYY4 767 aaKnown RBP12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 CFAP53Q96M91 514 aa12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 KANK1Q14678 1352 aa12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 ABCC1P33527 1531 aa12.54□□□□□ -0.4
TRAPPC2-201ENST00000359680 CCDC27Q2M243 656 aa12.53□□□□□ -0.4
TRAPPC2-201ENST00000359680 TRAPPC8Q9Y2L5 1435 aa12.53□□□□□ -0.4
TRAPPC2-201ENST00000359680 HSP90AA1P07900 732 aaKnown RBP12.53□□□□□ -0.4
TRAPPC2-201ENST00000359680 GRPEL1Q9HAV7 217 aa12.53□□□□□ -0.4
TRAPPC2-201ENST00000359680 ISY1Q9ULR0 285 aaKnown RBP12.53□□□□□ -0.4
TRAPPC2-201ENST00000359680 RTEL1-TNFRSF6BF6WH68 1400 aa12.53□□□□□ -0.4
TRAPPC2-201ENST00000359680 MYOM2P54296 1465 aa12.52□□□□□ -0.4
TRAPPC2-201ENST00000359680 SBNO2Q9Y2G9 1366 aa12.52□□□□□ -0.41
TRAPPC2-201ENST00000359680 ADGRF5Q8IZF2 1346 aa12.52□□□□□ -0.41
TRAPPC2-201ENST00000359680 NEURL4Q96JN8 1562 aa12.51□□□□□ -0.41
TRAPPC2-201ENST00000359680 MTHFSP49914 203 aa12.51□□□□□ -0.41
TRAPPC2-201ENST00000359680 DEPDC5O75140 1603 aa12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 MYO3AQ8NEV4 1616 aa12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 HSP90AA2PQ14568 343 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 TRIM44Q96DX7 344 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 SMC4Q9NTJ3 1288 aa12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 CT47B1P0C2W7 299 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 HDAC1Q13547 482 aaPredicted RBP12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 DDX19BQ9UMR2 479 aa12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 KIF1BO60333 1816 aa12.5□□□□□ -0.41
TRAPPC2-201ENST00000359680 ZNF518AQ6AHZ1 1483 aa12.49□□□□□ -0.41
TRAPPC2-201ENST00000359680 ESPNB1AK53 854 aa12.49□□□□□ -0.41
TRAPPC2-201ENST00000359680 ITPRIPQ8IWB1 547 aa12.49□□□□□ -0.41
TRAPPC2-201ENST00000359680 ZFYVE16Q7Z3T8 1539 aa12.49□□□□□ -0.41
TRAPPC2-201ENST00000359680 RRP9O43818 475 aaKnown RBP12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 U2AF1L5P0DN76 240 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 U2AF1Q01081 240 aaKnown RBP eCLIP12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 NCBP3Q53F19 620 aaKnown RBP12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 GBP4Q96PP9 640 aa12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 ZNF692Q9BU19 519 aaPredicted RBP12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 SLC12A5Q9H2X9 1139 aa12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 AFAP1Q8N556 730 aa12.48□□□□□ -0.41
TRAPPC2-201ENST00000359680 HSP90AB1P08238 724 aaKnown RBP12.47□□□□□ -0.41
TRAPPC2-201ENST00000359680 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
TRAPPC2-201ENST00000359680 TRIM27P14373 513 aa12.47□□□□□ -0.41
TRAPPC2-201ENST00000359680 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
TRAPPC2-201ENST00000359680 SMC5Q8IY18 1101 aa12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 TSR2Q969E8 191 aaKnown RBP12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 SNX21Q969T3 373 aa12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 CIZ1Q9ULV3 898 aaPredicted RBP12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 KIF3BO15066 747 aa12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 PTMSP20962 102 aa12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 RBM25P49756 843 aaKnown RBP12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
TRAPPC2-201ENST00000359680 IFT172Q9UG01 1749 aa12.46□□□□□ -0.42
TRAPPC2-201ENST00000359680 USP32Q8NFA0 1604 aa12.46□□□□□ -0.42
TRAPPC2-201ENST00000359680 EXOSC9Q06265 439 aaKnown RBP12.46□□□□□ -0.42
TRAPPC2-201ENST00000359680 SKOR2Q2VWA4 1001 aaPredicted RBP12.46□□□□□ -0.42
TRAPPC2-201ENST00000359680 ATF7IPQ6VMQ6 1270 aa12.46□□□□□ -0.42
TRAPPC2-201ENST00000359680 TRAK1Q9UPV9 953 aa12.46□□□□□ -0.42
TRAPPC2-201ENST00000359680 PPP4R3CPQ6ZMV5 832 aa12.45□□□□□ -0.42
TRAPPC2-201ENST00000359680 ADGRL1O94910 1474 aa12.45□□□□□ -0.42
TRAPPC2-201ENST00000359680 VWDEQ8N2E2 1590 aa12.45□□□□□ -0.42
TRAPPC2-201ENST00000359680 DDIT3P35638 169 aa12.45□□□□□ -0.42
TRAPPC2-201ENST00000359680 QRICH2Q9H0J4 1663 aa12.44□□□□□ -0.42
TRAPPC2-201ENST00000359680 ADGRB2O60241 1585 aa12.44□□□□□ -0.42
TRAPPC2-201ENST00000359680 VSIG10Q8N0Z9 540 aa12.44□□□□□ -0.42
TRAPPC2-201ENST00000359680 SSH1Q8WYL5 1049 aa12.44□□□□□ -0.42
TRAPPC2-201ENST00000359680 ERBB4Q15303 1308 aa12.44□□□□□ -0.42
TRAPPC2-201ENST00000359680 SETBP1Q9Y6X0 1596 aa12.44□□□□□ -0.42
TRAPPC2-201ENST00000359680 PKNOX2Q96KN3 472 aa12.43□□□□□ -0.42
TRAPPC2-201ENST00000359680 MROH2AA6NES4 1674 aa12.43□□□□□ -0.42
TRAPPC2-201ENST00000359680 ZC3H13Q5T200 1668 aaKnown RBP12.43□□□□□ -0.42
TRAPPC2-201ENST00000359680 RAB3GAP1Q15042 981 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms