RNA–Protein interactions for RNA: ENST00000359524.7

RUNX2-201, Transcript of runt related transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene RUNX2, Length 5,390 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-201ENST00000359524 RUFY1Q96T51 708 aa20.5■□□□□ 0.87
RUNX2-201ENST00000359524 FOXD4L1Q9NU39 408 aa20.5■□□□□ 0.87
RUNX2-201ENST00000359524 GRIN2AQ12879 1464 aa20.5■□□□□ 0.87
RUNX2-201ENST00000359524 NAT10Q9H0A0 1025 aaKnown RBP20.49■□□□□ 0.87
RUNX2-201ENST00000359524 LETM1O95202 739 aaPredicted RBP20.49■□□□□ 0.87
RUNX2-201ENST00000359524 MCTP1Q6DN14 999 aa20.49■□□□□ 0.87
RUNX2-201ENST00000359524 ZNF771Q7L3S4 317 aaPredicted RBP20.49■□□□□ 0.87
RUNX2-201ENST00000359524 ARID3AQ99856 593 aa20.49■□□□□ 0.87
RUNX2-201ENST00000359524 MYO6Q9UM54 1294 aa20.49■□□□□ 0.87
RUNX2-201ENST00000359524 SASS6Q6UVJ0 657 aa20.49■□□□□ 0.87
RUNX2-201ENST00000359524 C9orf78Q9NZ63 289 aaPredicted RBP20.49■□□□□ 0.87
RUNX2-201ENST00000359524 CALRP27797 417 aaKnown RBP20.48■□□□□ 0.87
RUNX2-201ENST00000359524 CCDC73Q6ZRK6 1079 aa20.48■□□□□ 0.87
RUNX2-201ENST00000359524 ST20-MTHFSA0A0A6YYL1 179 aa20.48■□□□□ 0.87
RUNX2-201ENST00000359524 CCDC173Q0VFZ6 552 aa20.47■□□□□ 0.87
RUNX2-201ENST00000359524 DCTN1Q14203 1278 aa20.47■□□□□ 0.87
RUNX2-201ENST00000359524 HOMER1Q86YM7 354 aa20.47■□□□□ 0.87
RUNX2-201ENST00000359524 CCP110O43303 1012 aa20.46■□□□□ 0.87
RUNX2-201ENST00000359524 PDE4CQ08493 712 aa20.46■□□□□ 0.87
RUNX2-201ENST00000359524 G3BP1Q13283 466 aaKnown RBP eCLIP20.46■□□□□ 0.87
RUNX2-201ENST00000359524 BICD2Q8TD16 824 aa20.46■□□□□ 0.87
RUNX2-201ENST00000359524 PANK3Q9H999 370 aa20.46■□□□□ 0.87
RUNX2-201ENST00000359524 ANO2Q9NQ90 1003 aa20.46■□□□□ 0.87
RUNX2-201ENST00000359524 MAGI1Q96QZ7 1491 aaPredicted RBP20.46■□□□□ 0.87
RUNX2-201ENST00000359524 HSP90B2PQ58FF3 399 aa20.45■□□□□ 0.86
RUNX2-201ENST00000359524 PODXL2Q9NZ53 605 aa20.45■□□□□ 0.86
RUNX2-201ENST00000359524 DZIP1LQ8IYY4 767 aaKnown RBP20.45■□□□□ 0.86
RUNX2-201ENST00000359524 BRMS1Q9HCU9 246 aa20.45■□□□□ 0.86
RUNX2-201ENST00000359524 SMC3Q9UQE7 1217 aa20.45■□□□□ 0.86
RUNX2-201ENST00000359524 WASHC2AQ641Q2 1341 aa20.44■□□□□ 0.86
RUNX2-201ENST00000359524 XBP1P17861 261 aa20.44■□□□□ 0.86
RUNX2-201ENST00000359524 DIAPH1O60610 1272 aaKnown RBP20.43■□□□□ 0.86
RUNX2-201ENST00000359524 GNAI1P63096 354 aa20.43■□□□□ 0.86
RUNX2-201ENST00000359524 MNS1Q8NEH6 495 aa20.43■□□□□ 0.86
RUNX2-201ENST00000359524 USP47Q96K76 1375 aa20.43■□□□□ 0.86
RUNX2-201ENST00000359524 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.43■□□□□ 0.86
RUNX2-201ENST00000359524 PKNOX2Q96KN3 472 aa20.43■□□□□ 0.86
RUNX2-201ENST00000359524 PRKRIP1Q9H875 184 aaPredicted RBP20.43■□□□□ 0.86
RUNX2-201ENST00000359524 KIF7Q2M1P5 1343 aa20.42■□□□□ 0.86
RUNX2-201ENST00000359524 CYB5RLQ6IPT4 315 aa20.42■□□□□ 0.86
RUNX2-201ENST00000359524 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.42■□□□□ 0.86
RUNX2-201ENST00000359524 CCDC43Q96MW1 224 aaKnown RBP20.42■□□□□ 0.86
RUNX2-201ENST00000359524 ARHGAP5Q13017 1502 aa20.42■□□□□ 0.86
RUNX2-201ENST00000359524 NAIPQ13075 1403 aa20.42■□□□□ 0.86
RUNX2-201ENST00000359524 DAPK1P53355 1430 aa20.42■□□□□ 0.86
RUNX2-201ENST00000359524 CWC15Q9P013 229 aaKnown RBP20.41■□□□□ 0.86
RUNX2-201ENST00000359524 PSMA5P28066 241 aa20.41■□□□□ 0.86
RUNX2-201ENST00000359524 PIP4K2AP48426 406 aaPredicted RBP20.41■□□□□ 0.86
RUNX2-201ENST00000359524 CCDC39Q9UFE4 941 aa20.41■□□□□ 0.86
RUNX2-201ENST00000359524 PLB1Q6P1J6 1458 aa20.41■□□□□ 0.86
RUNX2-201ENST00000359524 NINLQ9Y2I6 1382 aa20.4■□□□□ 0.86
RUNX2-201ENST00000359524 OLFM4Q6UX06 510 aa20.4■□□□□ 0.86
RUNX2-201ENST00000359524 MCM2P49736 904 aa20.4■□□□□ 0.86
RUNX2-201ENST00000359524 TRAK1Q9UPV9 953 aa20.4■□□□□ 0.86
RUNX2-201ENST00000359524 FOXD4L5Q5VV16 416 aaPredicted RBP20.4■□□□□ 0.86
RUNX2-201ENST00000359524 FOXD4L4Q8WXT5 416 aaPredicted RBP20.4■□□□□ 0.86
RUNX2-201ENST00000359524 LTV1Q96GA3 475 aaPredicted RBP20.39■□□□□ 0.85
RUNX2-201ENST00000359524 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.39■□□□□ 0.85
RUNX2-201ENST00000359524 ZNF592Q92610 1267 aa20.39■□□□□ 0.85
RUNX2-201ENST00000359524 RUNDC1Q96C34 613 aa20.39■□□□□ 0.85
RUNX2-201ENST00000359524 FAM43AQ8N2R8 423 aa20.38■□□□□ 0.85
RUNX2-201ENST00000359524 EVA1CP58658 441 aa20.37■□□□□ 0.85
RUNX2-201ENST00000359524 NFXL1Q6ZNB6 911 aa20.37■□□□□ 0.85
RUNX2-201ENST00000359524 C9orf84Q5VXU9 1444 aa20.37■□□□□ 0.85
RUNX2-201ENST00000359524 CRBNQ96SW2 442 aa20.37■□□□□ 0.85
RUNX2-201ENST00000359524 MBD3O95983 291 aa20.37■□□□□ 0.85
RUNX2-201ENST00000359524 VPS37DQ86XT2 251 aa20.37■□□□□ 0.85
RUNX2-201ENST00000359524 AFAP1Q8N556 730 aa20.37■□□□□ 0.85
RUNX2-201ENST00000359524 HIP1O00291 1037 aa20.36■□□□□ 0.85
RUNX2-201ENST00000359524 RALYLQ86SE5 291 aaKnown RBP20.36■□□□□ 0.85
RUNX2-201ENST00000359524 APPP05067 770 aa20.36■□□□□ 0.85
RUNX2-201ENST00000359524 MRE11P49959 708 aa20.36■□□□□ 0.85
RUNX2-201ENST00000359524 CT47A1Q5JQC4 288 aaPredicted RBP20.36■□□□□ 0.85
RUNX2-201ENST00000359524 ODF2Q5BJF6 829 aa20.36■□□□□ 0.85
RUNX2-201ENST00000359524 CCDC191Q8NCU4 936 aa20.35■□□□□ 0.85
RUNX2-201ENST00000359524 PTPN23Q9H3S7 1636 aa20.35■□□□□ 0.85
RUNX2-201ENST00000359524 NUTM2DQ5VT03 806 aaPredicted RBP20.35■□□□□ 0.85
RUNX2-201ENST00000359524 CDC45O75419 566 aa20.34■□□□□ 0.85
RUNX2-201ENST00000359524 TXLNBQ8N3L3 684 aa20.34■□□□□ 0.85
RUNX2-201ENST00000359524 PDCP20941 246 aa20.34■□□□□ 0.85
RUNX2-201ENST00000359524 COG6Q9Y2V7 657 aa20.34■□□□□ 0.85
RUNX2-201ENST00000359524 R3HCC1Q9Y3T6 440 aaKnown RBP20.34■□□□□ 0.85
RUNX2-201ENST00000359524 DHX16O60231 1041 aaKnown RBP20.33■□□□□ 0.85
RUNX2-201ENST00000359524 EXOC6Q8TAG9 804 aa20.33■□□□□ 0.84
RUNX2-201ENST00000359524 RRP7AQ9Y3A4 280 aaKnown RBP20.32■□□□□ 0.84
RUNX2-201ENST00000359524 SMARCE1Q969G3 411 aa20.31■□□□□ 0.84
RUNX2-201ENST00000359524 SART3Q15020 963 aaKnown RBP20.31■□□□□ 0.84
RUNX2-201ENST00000359524 OFD1O75665 1012 aa20.31■□□□□ 0.84
RUNX2-201ENST00000359524 CCDC66A2RUB6 948 aa20.31■□□□□ 0.84
RUNX2-201ENST00000359524 HMGN5P82970 282 aaKnown RBP20.31■□□□□ 0.84
RUNX2-201ENST00000359524 VPS37CA5D8V6 355 aaPredicted RBP20.3■□□□□ 0.84
RUNX2-201ENST00000359524 KIF21AQ7Z4S6 1674 aa20.3■□□□□ 0.84
RUNX2-201ENST00000359524 RIPK4P57078 832 aa20.3■□□□□ 0.84
RUNX2-201ENST00000359524 IFT57Q9NWB7 429 aa20.3■□□□□ 0.84
RUNX2-201ENST00000359524 CCDC7Q96M83 1385 aa20.3■□□□□ 0.84
RUNX2-201ENST00000359524 FKBP5Q13451 457 aaPredicted RBP20.29■□□□□ 0.84
RUNX2-201ENST00000359524 FILIP1LQ4L180 1135 aa20.29■□□□□ 0.84
RUNX2-201ENST00000359524 CTTNBP2Q8WZ74 1663 aa20.29■□□□□ 0.84
RUNX2-201ENST00000359524 EPS15P42566 896 aa20.29■□□□□ 0.84
RUNX2-201ENST00000359524 PDIA4P13667 645 aaKnown RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms