RNA–Protein interactions for RNA: ENST00000359454.10

CCDC196-201, Transcript of coiled-coil domain containing 196, humanhuman

TSL 1 (best)

Gene CCDC196, Length 1,083 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196-201ENST00000359454 LMTK2Q8IWU2 1503 aa9.92□□□□□ -0.82
CCDC196-201ENST00000359454 CROCC2H7BZ55 1655 aa9.91□□□□□ -0.82
CCDC196-201ENST00000359454 POTEAQ6S8J7 498 aa9.91□□□□□ -0.82
CCDC196-201ENST00000359454 PAXIP1Q6ZW49 1069 aaPredicted RBP9.91□□□□□ -0.82
CCDC196-201ENST00000359454 TET3O43151 1660 aa9.9□□□□□ -0.82
CCDC196-201ENST00000359454 CFAP44Q96MT7 982 aa9.9□□□□□ -0.82
CCDC196-201ENST00000359454 SLC26A8Q96RN1 970 aa9.9□□□□□ -0.82
CCDC196-201ENST00000359454 DAPK1P53355 1430 aa9.9□□□□□ -0.83
CCDC196-201ENST00000359454 ANKRD30AQ9BXX3 1397 aa9.89□□□□□ -0.83
CCDC196-201ENST00000359454 PTPN23Q9H3S7 1636 aa9.89□□□□□ -0.83
CCDC196-201ENST00000359454 NKTRP30414 1462 aaKnown RBP9.89□□□□□ -0.83
CCDC196-201ENST00000359454 ROBO1Q9Y6N7 1651 aa9.89□□□□□ -0.83
CCDC196-201ENST00000359454 NOS1P29475 1434 aa9.89□□□□□ -0.83
CCDC196-201ENST00000359454 SPRYD3Q8NCJ5 442 aa9.88□□□□□ -0.83
CCDC196-201ENST00000359454 SLC52A1Q9NWF4 448 aa9.88□□□□□ -0.83
CCDC196-201ENST00000359454 NWD1Q149M9 1564 aa9.88□□□□□ -0.83
CCDC196-201ENST00000359454 MSH6P52701 1360 aa9.88□□□□□ -0.83
CCDC196-201ENST00000359454 ADGRB3O60242 1522 aa9.87□□□□□ -0.83
CCDC196-201ENST00000359454 LOC105371045A0A1W2PR82 267 aa9.87□□□□□ -0.83
CCDC196-201ENST00000359454 RBM33Q96EV2 1170 aaKnown RBP9.87□□□□□ -0.83
CCDC196-201ENST00000359454 BCANQ96GW7 911 aa9.87□□□□□ -0.83
CCDC196-201ENST00000359454 SLAIN2Q9P270 581 aa9.87□□□□□ -0.83
CCDC196-201ENST00000359454 CLCN6P51797 869 aa9.86□□□□□ -0.83
CCDC196-201ENST00000359454 HDGFP51858 240 aaKnown RBP9.86□□□□□ -0.83
CCDC196-201ENST00000359454 NKX1-1Q15270 411 aaPredicted RBP9.86□□□□□ -0.83
CCDC196-201ENST00000359454 FGD6Q6ZV73 1430 aa9.86□□□□□ -0.83
CCDC196-201ENST00000359454 CHIC2Q9UKJ5 165 aa9.86□□□□□ -0.83
CCDC196-201ENST00000359454 JCADQ9P266 1359 aa9.86□□□□□ -0.83
CCDC196-201ENST00000359454 HAP1P54257 671 aaPredicted RBP9.85□□□□□ -0.83
CCDC196-201ENST00000359454 PLEKHG1Q9ULL1 1385 aa9.85□□□□□ -0.83
CCDC196-201ENST00000359454 RPRD2Q5VT52 1461 aaKnown RBP9.85□□□□□ -0.83
CCDC196-201ENST00000359454 GALR2O43603 387 aaPredicted RBP9.84□□□□□ -0.83
CCDC196-201ENST00000359454 TRPC6Q9Y210 931 aa9.84□□□□□ -0.83
CCDC196-201ENST00000359454 PHLPP1O60346 1717 aa9.84□□□□□ -0.83
CCDC196-201ENST00000359454 ZFYVE9O95405 1425 aa9.83□□□□□ -0.84
CCDC196-201ENST00000359454 NCOA3Q9Y6Q9 1424 aa9.83□□□□□ -0.84
CCDC196-201ENST00000359454 PPP1R15AO75807 674 aaPredicted RBP9.83□□□□□ -0.84
CCDC196-201ENST00000359454 TMEM106CQ9BVX2 250 aa9.83□□□□□ -0.84
CCDC196-201ENST00000359454 TBX22Q9Y458 520 aa9.83□□□□□ -0.84
CCDC196-201ENST00000359454 ADGRL2O95490 1459 aa9.83□□□□□ -0.84
CCDC196-201ENST00000359454 RIMS2Q9UQ26 1411 aa9.82□□□□□ -0.84
CCDC196-201ENST00000359454 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.82□□□□□ -0.84
CCDC196-201ENST00000359454 CABP2Q9NPB3 220 aa9.82□□□□□ -0.84
CCDC196-201ENST00000359454 CHD2O14647 1828 aaKnown RBP9.82□□□□□ -0.84
CCDC196-201ENST00000359454 SPATA31A6Q5VVP1 1343 aa9.82□□□□□ -0.84
CCDC196-201ENST00000359454 ANKRD50Q9ULJ7 1429 aa9.81□□□□□ -0.84
CCDC196-201ENST00000359454 TIE1P35590 1138 aa9.8□□□□□ -0.84
CCDC196-201ENST00000359454 MEX3CQ5U5Q3 659 aaKnown RBP9.8□□□□□ -0.84
CCDC196-201ENST00000359454 ZNF772Q68DY9 489 aaPredicted RBP9.8□□□□□ -0.84
CCDC196-201ENST00000359454 C14orf37Q86TY3 774 aa9.8□□□□□ -0.84
CCDC196-201ENST00000359454 CADPS2Q86UW7 1296 aa9.8□□□□□ -0.84
CCDC196-201ENST00000359454 RYDENQ9NUL5 291 aaKnown RBP9.8□□□□□ -0.84
CCDC196-201ENST00000359454 COL16A1Q07092 1604 aaPredicted RBP9.8□□□□□ -0.84
CCDC196-201ENST00000359454 SETD1AO15047 1707 aaKnown RBP9.79□□□□□ -0.84
CCDC196-201ENST00000359454 TMEM131LA2VDJ0 1609 aa9.79□□□□□ -0.84
CCDC196-201ENST00000359454 PIK3R4Q99570 1358 aa9.79□□□□□ -0.84
CCDC196-201ENST00000359454 GTPBP6O43824 516 aaPredicted RBP9.79□□□□□ -0.84
CCDC196-201ENST00000359454 ATF3P18847 181 aa9.79□□□□□ -0.84
CCDC196-201ENST00000359454 C19orf44Q9H6X5 657 aa9.79□□□□□ -0.84
CCDC196-201ENST00000359454 GCC2Q8IWJ2 1684 aa9.79□□□□□ -0.84
CCDC196-201ENST00000359454 GOLGA2Q08379 1002 aa9.78□□□□□ -0.84
CCDC196-201ENST00000359454 EFCAB3Q8N7B9 438 aa9.78□□□□□ -0.84
CCDC196-201ENST00000359454 DIP2AQ14689 1571 aa9.78□□□□□ -0.84
CCDC196-201ENST00000359454 LRP6O75581 1613 aa9.78□□□□□ -0.84
CCDC196-201ENST00000359454 AHDC1Q5TGY3 1603 aaPredicted RBP9.78□□□□□ -0.84
CCDC196-201ENST00000359454 MYO5BQ9ULV0 1848 aa9.77□□□□□ -0.84
CCDC196-201ENST00000359454 ADAMTS13Q76LX8 1427 aa9.77□□□□□ -0.85
CCDC196-201ENST00000359454 TTLL13PA6NNM8 815 aa9.77□□□□□ -0.85
CCDC196-201ENST00000359454 FAM50AQ14320 339 aaKnown RBP9.77□□□□□ -0.85
CCDC196-201ENST00000359454 UPF1Q92900 1129 aaKnown RBP eCLIP9.77□□□□□ -0.85
CCDC196-201ENST00000359454 BMP2KQ9NSY1 1161 aaPredicted RBP9.77□□□□□ -0.85
CCDC196-201ENST00000359454 GABBR2O75899 941 aa9.76□□□□□ -0.85
CCDC196-201ENST00000359454 TRIM52Q96A61 297 aa9.76□□□□□ -0.85
CCDC196-201ENST00000359454 SHPRHQ149N8 1683 aa9.76□□□□□ -0.85
CCDC196-201ENST00000359454 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.76□□□□□ -0.85
CCDC196-201ENST00000359454 RXRBP28702 533 aa9.75□□□□□ -0.85
CCDC196-201ENST00000359454 NUTM2DQ5VT03 806 aaPredicted RBP9.75□□□□□ -0.85
CCDC196-201ENST00000359454 TRPM2O94759 1503 aa9.75□□□□□ -0.85
CCDC196-201ENST00000359454 UNC13BO14795 1591 aa9.75□□□□□ -0.85
CCDC196-201ENST00000359454 SOX12O15370 315 aa9.74□□□□□ -0.85
CCDC196-201ENST00000359454 BRINP3Q76B58 766 aa9.74□□□□□ -0.85
CCDC196-201ENST00000359454 AMOTL2Q9Y2J4 779 aa9.74□□□□□ -0.85
CCDC196-201ENST00000359454 DCCP43146 1447 aa9.73□□□□□ -0.85
CCDC196-201ENST00000359454 CDK12Q9NYV4 1490 aaPredicted RBP9.73□□□□□ -0.85
CCDC196-201ENST00000359454 MKRN3Q13064 507 aaKnown RBP9.73□□□□□ -0.85
CCDC196-201ENST00000359454 MFRPQ9BY79 579 aa9.73□□□□□ -0.85
CCDC196-201ENST00000359454 E9PCH4 1651 aa9.73□□□□□ -0.85
CCDC196-201ENST00000359454 NUTM2BA6NNL0 878 aaPredicted RBP9.72□□□□□ -0.85
CCDC196-201ENST00000359454 NUTM2EB1AL46 878 aaPredicted RBP9.72□□□□□ -0.85
CCDC196-201ENST00000359454 NLRP6P59044 892 aa9.72□□□□□ -0.85
CCDC196-201ENST00000359454 NUTM2AQ8IVF1 878 aaPredicted RBP9.72□□□□□ -0.85
CCDC196-201ENST00000359454 ROCK1Q13464 1354 aa9.72□□□□□ -0.85
CCDC196-201ENST00000359454 PTPRUQ92729 1446 aa9.72□□□□□ -0.85
CCDC196-201ENST00000359454 IQGAP3Q86VI3 1631 aa9.71□□□□□ -0.85
CCDC196-201ENST00000359454 TSHZ2Q9NRE2 1034 aa9.71□□□□□ -0.86
CCDC196-201ENST00000359454 PHF8Q9UPP1 1060 aa9.71□□□□□ -0.86
CCDC196-201ENST00000359454 TRIM35Q9UPQ4 493 aa9.71□□□□□ -0.86
CCDC196-201ENST00000359454 SETD5Q9C0A6 1442 aa9.71□□□□□ -0.86
CCDC196-201ENST00000359454 ASXL1Q8IXJ9 1541 aa9.71□□□□□ -0.86
CCDC196-201ENST00000359454 LRRC59Q96AG4 307 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms