RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 TXNDC2Q86VQ3 553 aa19.26■□□□□ 0.67
PDLIM5-203ENST00000359265 PLEKHG1Q9ULL1 1385 aa19.26■□□□□ 0.67
PDLIM5-203ENST00000359265 C11orf95C9JLR9 678 aaPredicted RBP19.25■□□□□ 0.67
PDLIM5-203ENST00000359265 DIP2AQ14689 1571 aa19.24■□□□□ 0.67
PDLIM5-203ENST00000359265 MEX3CQ5U5Q3 659 aaKnown RBP19.22■□□□□ 0.67
PDLIM5-203ENST00000359265 KNDC1Q76NI1 1749 aa19.21■□□□□ 0.67
PDLIM5-203ENST00000359265 BCANQ96GW7 911 aa19.21■□□□□ 0.67
PDLIM5-203ENST00000359265 TESK2Q96S53 571 aa19.21■□□□□ 0.67
PDLIM5-203ENST00000359265 PROSER2Q86WR7 435 aaPredicted RBP19.2■□□□□ 0.66
PDLIM5-203ENST00000359265 SLAIN2Q9P270 581 aa19.2■□□□□ 0.66
PDLIM5-203ENST00000359265 COL16A1Q07092 1604 aaPredicted RBP19.2■□□□□ 0.66
PDLIM5-203ENST00000359265 TMF1P82094 1093 aa19.19■□□□□ 0.66
PDLIM5-203ENST00000359265 CDK12Q9NYV4 1490 aaPredicted RBP19.19■□□□□ 0.66
PDLIM5-203ENST00000359265 SBNO2Q9Y2G9 1366 aa19.19■□□□□ 0.66
PDLIM5-203ENST00000359265 SLC24A1O60721 1099 aa19.18■□□□□ 0.66
PDLIM5-203ENST00000359265 KCNA6P17658 529 aa19.18■□□□□ 0.66
PDLIM5-203ENST00000359265 SPATA31A6Q5VVP1 1343 aa19.18■□□□□ 0.66
PDLIM5-203ENST00000359265 TMEM132EQ6IEE7 984 aa19.17■□□□□ 0.66
PDLIM5-203ENST00000359265 MIER1Q8N108 512 aa19.17■□□□□ 0.66
PDLIM5-203ENST00000359265 POLR3GLQ9BT43 218 aa19.17■□□□□ 0.66
PDLIM5-203ENST00000359265 ADAMTS13Q76LX8 1427 aa19.17■□□□□ 0.66
PDLIM5-203ENST00000359265 YTHDC2Q9H6S0 1430 aaKnown RBP19.17■□□□□ 0.66
PDLIM5-203ENST00000359265 DLC1Q96QB1 1528 aa19.16■□□□□ 0.66
PDLIM5-203ENST00000359265 CENPJQ9HC77 1338 aaPredicted RBP19.16■□□□□ 0.66
PDLIM5-203ENST00000359265 TRAK1Q9UPV9 953 aa19.15■□□□□ 0.66
PDLIM5-203ENST00000359265 MYOM1P52179 1685 aa19.14■□□□□ 0.66
PDLIM5-203ENST00000359265 CDCA8Q53HL2 280 aa19.14■□□□□ 0.65
PDLIM5-203ENST00000359265 RGS12O14924 1447 aa19.12■□□□□ 0.65
PDLIM5-203ENST00000359265 LRPPRCP42704 1394 aaKnown RBP19.12■□□□□ 0.65
PDLIM5-203ENST00000359265 SLC26A8Q96RN1 970 aa19.12■□□□□ 0.65
PDLIM5-203ENST00000359265 TBX22Q9Y458 520 aa19.12■□□□□ 0.65
PDLIM5-203ENST00000359265 ANP32CO43423 234 aa19.11■□□□□ 0.65
PDLIM5-203ENST00000359265 ZRANB1Q9UGI0 708 aa19.11■□□□□ 0.65
PDLIM5-203ENST00000359265 METP08581 1390 aa19.1■□□□□ 0.65
PDLIM5-203ENST00000359265 PIK3R4Q99570 1358 aa19.1■□□□□ 0.65
PDLIM5-203ENST00000359265 AFF2P51816 1311 aa19.1■□□□□ 0.65
PDLIM5-203ENST00000359265 NUTM2BA6NNL0 878 aaPredicted RBP19.09■□□□□ 0.65
PDLIM5-203ENST00000359265 NUTM2EB1AL46 878 aaPredicted RBP19.09■□□□□ 0.65
PDLIM5-203ENST00000359265 NUTM2AQ8IVF1 878 aaPredicted RBP19.09■□□□□ 0.65
PDLIM5-203ENST00000359265 MSH6P52701 1360 aa19.08■□□□□ 0.65
PDLIM5-203ENST00000359265 ABCC11Q96J66 1382 aa19.08■□□□□ 0.65
PDLIM5-203ENST00000359265 TECPR2O15040 1411 aa19.08■□□□□ 0.64
PDLIM5-203ENST00000359265 STK26Q9P289 416 aa19.07■□□□□ 0.64
PDLIM5-203ENST00000359265 SHPRHQ149N8 1683 aa19.07■□□□□ 0.64
PDLIM5-203ENST00000359265 CHD2O14647 1828 aaKnown RBP19.07■□□□□ 0.64
PDLIM5-203ENST00000359265 XRN1Q8IZH2 1706 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-203ENST00000359265 TULP4Q9NRJ4 1543 aa19.05■□□□□ 0.64
PDLIM5-203ENST00000359265 QTRT2Q9H974 415 aaKnown RBP19.05■□□□□ 0.64
PDLIM5-203ENST00000359265 RBM6P78332 1123 aaKnown RBP19.03■□□□□ 0.64
PDLIM5-203ENST00000359265 SIRT1Q96EB6 747 aa19.03■□□□□ 0.64
PDLIM5-203ENST00000359265 PTCH1Q13635 1447 aa19.02■□□□□ 0.64
PDLIM5-203ENST00000359265 POGKQ9P215 609 aa19.02■□□□□ 0.64
PDLIM5-203ENST00000359265 NWD1Q149M9 1564 aa19.02■□□□□ 0.63
PDLIM5-203ENST00000359265 EVC2Q86UK5 1308 aa19.01■□□□□ 0.63
PDLIM5-203ENST00000359265 PRAM1Q96QH2 718 aa19.01■□□□□ 0.63
PDLIM5-203ENST00000359265 NKTRP30414 1462 aaKnown RBP19.01■□□□□ 0.63
PDLIM5-203ENST00000359265 PTPRUQ92729 1446 aa19■□□□□ 0.63
PDLIM5-203ENST00000359265 AHDC1Q5TGY3 1603 aaPredicted RBP19■□□□□ 0.63
PDLIM5-203ENST00000359265 CCER2I3L3R5 266 aa18.99■□□□□ 0.63
PDLIM5-203ENST00000359265 PUS7Q96PZ0 661 aaKnown RBP18.99■□□□□ 0.63
PDLIM5-203ENST00000359265 AMOTL2Q9Y2J4 779 aa18.99■□□□□ 0.63
PDLIM5-203ENST00000359265 ADGRB2O60241 1585 aa18.98■□□□□ 0.63
PDLIM5-203ENST00000359265 SAFB2Q14151 953 aaKnown RBP eCLIP18.97■□□□□ 0.63
PDLIM5-203ENST00000359265 ATAD2Q6PL18 1390 aa18.96■□□□□ 0.63
PDLIM5-203ENST00000359265 C8orf37Q96NL8 207 aa18.96■□□□□ 0.63
PDLIM5-203ENST00000359265 ROBO2Q9HCK4 1378 aa18.95■□□□□ 0.62
PDLIM5-203ENST00000359265 PRKRIP1Q9H875 184 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-203ENST00000359265 MINK1Q8N4C8 1332 aaPredicted RBP18.95■□□□□ 0.62
PDLIM5-203ENST00000359265 PLEKHH1Q9ULM0 1364 aa18.94■□□□□ 0.62
PDLIM5-203ENST00000359265 PANK3Q9H999 370 aa18.94■□□□□ 0.62
PDLIM5-203ENST00000359265 KTN1Q86UP2 1357 aaKnown RBP18.93■□□□□ 0.62
PDLIM5-203ENST00000359265 NINLQ9Y2I6 1382 aa18.93■□□□□ 0.62
PDLIM5-203ENST00000359265 WAPLQ7Z5K2 1190 aa18.93■□□□□ 0.62
PDLIM5-203ENST00000359265 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.93■□□□□ 0.62
PDLIM5-203ENST00000359265 USP32Q8NFA0 1604 aa18.92■□□□□ 0.62
PDLIM5-203ENST00000359265 BRINP3Q76B58 766 aa18.91■□□□□ 0.62
PDLIM5-203ENST00000359265 SRPK2P78362 688 aaKnown RBP18.9■□□□□ 0.62
PDLIM5-203ENST00000359265 PER1O15534 1290 aaPredicted RBP18.89■□□□□ 0.61
PDLIM5-203ENST00000359265 ITSN1Q15811 1721 aa18.88■□□□□ 0.61
PDLIM5-203ENST00000359265 TOPAZ1Q8N9V7 1692 aa18.87■□□□□ 0.61
PDLIM5-203ENST00000359265 NGLY1Q96IV0 654 aa18.87■□□□□ 0.61
PDLIM5-203ENST00000359265 CABP2Q9NPB3 220 aa18.87■□□□□ 0.61
PDLIM5-203ENST00000359265 KNSTRNQ9Y448 316 aa18.87■□□□□ 0.61
PDLIM5-203ENST00000359265 NALCNQ8IZF0 1738 aa18.86■□□□□ 0.61
PDLIM5-203ENST00000359265 EP400Q96L91 3159 aa18.86■□□□□ 0.61
PDLIM5-203ENST00000359265 RALBP1Q15311 655 aa18.86■□□□□ 0.61
PDLIM5-203ENST00000359265 C14orf37Q86TY3 774 aa18.86■□□□□ 0.61
PDLIM5-203ENST00000359265 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
PDLIM5-203ENST00000359265 TMC1Q8TDI8 760 aa18.86■□□□□ 0.61
PDLIM5-203ENST00000359265 ANKRD36BQ8N2N9 1353 aa18.85■□□□□ 0.61
PDLIM5-203ENST00000359265 PARD3Q8TEW0 1356 aa18.85■□□□□ 0.61
PDLIM5-203ENST00000359265 NPC1L1Q9UHC9 1359 aa18.85■□□□□ 0.61
PDLIM5-203ENST00000359265 CDK19Q9BWU1 502 aa18.85■□□□□ 0.61
PDLIM5-203ENST00000359265 C19orf44Q9H6X5 657 aa18.85■□□□□ 0.61
PDLIM5-203ENST00000359265 NCOA3Q9Y6Q9 1424 aa18.84■□□□□ 0.61
PDLIM5-203ENST00000359265 AKAP12Q02952 1782 aa18.84■□□□□ 0.61
PDLIM5-203ENST00000359265 ANKRD26Q9UPS8 1709 aa18.84■□□□□ 0.61
PDLIM5-203ENST00000359265 WASLO00401 505 aaPredicted RBP18.84■□□□□ 0.61
PDLIM5-203ENST00000359265 ATF3P18847 181 aa18.84■□□□□ 0.61
PDLIM5-203ENST00000359265 CDC42BPGQ6DT37 1551 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms