RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 PDE3BQ13370 1112 aa19.93■□□□□ 0.78
GABPB1-202ENST00000359031 PUS7Q96PZ0 661 aaKnown RBP19.93■□□□□ 0.78
GABPB1-202ENST00000359031 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
GABPB1-202ENST00000359031 IRX6P78412 446 aaPredicted RBP19.91■□□□□ 0.78
GABPB1-202ENST00000359031 TMEM132EQ6IEE7 984 aa19.91■□□□□ 0.78
GABPB1-202ENST00000359031 PPP4R2Q9NY27 417 aa19.91■□□□□ 0.78
GABPB1-202ENST00000359031 ALKQ9UM73 1620 aa19.88■□□□□ 0.77
GABPB1-202ENST00000359031 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
GABPB1-202ENST00000359031 CEP170BQ9Y4F5 1589 aaPredicted RBP19.87■□□□□ 0.77
GABPB1-202ENST00000359031 FBXO31Q5XUX0 539 aaPredicted RBP19.87■□□□□ 0.77
GABPB1-202ENST00000359031 TSHZ2Q9NRE2 1034 aa19.87■□□□□ 0.77
GABPB1-202ENST00000359031 A2ML1A8K2U0 1454 aa19.87■□□□□ 0.77
GABPB1-202ENST00000359031 ZNF142P52746 1687 aaPredicted RBP19.86■□□□□ 0.77
GABPB1-202ENST00000359031 NSD3Q9BZ95 1437 aa19.86■□□□□ 0.77
GABPB1-202ENST00000359031 NUTM2DQ5VT03 806 aaPredicted RBP19.86■□□□□ 0.77
GABPB1-202ENST00000359031 CARD14Q9BXL6 1004 aa19.86■□□□□ 0.77
GABPB1-202ENST00000359031 SETD1AO15047 1707 aaKnown RBP19.86■□□□□ 0.77
GABPB1-202ENST00000359031 WDR43Q15061 677 aaKnown RBP eCLIP19.85■□□□□ 0.77
GABPB1-202ENST00000359031 NINLQ9Y2I6 1382 aa19.85■□□□□ 0.77
GABPB1-202ENST00000359031 YTHDC2Q9H6S0 1430 aaKnown RBP19.84■□□□□ 0.77
GABPB1-202ENST00000359031 DLC1Q96QB1 1528 aa19.82■□□□□ 0.76
GABPB1-202ENST00000359031 ANKRD36BQ8N2N9 1353 aa19.82■□□□□ 0.76
GABPB1-202ENST00000359031 RIMS2Q9UQ26 1411 aa19.8■□□□□ 0.76
GABPB1-202ENST00000359031 NSD2O96028 1365 aa19.8■□□□□ 0.76
GABPB1-202ENST00000359031 SENP3-EIF4A1A0A087X0R7 540 aa19.8■□□□□ 0.76
GABPB1-202ENST00000359031 STAG3Q9UJ98 1225 aa19.8■□□□□ 0.76
GABPB1-202ENST00000359031 ADAMTS8Q9UP79 889 aa19.8■□□□□ 0.76
GABPB1-202ENST00000359031 POLR3AO14802 1390 aaPredicted RBP19.79■□□□□ 0.76
GABPB1-202ENST00000359031 SHPRHQ149N8 1683 aa19.78■□□□□ 0.76
GABPB1-202ENST00000359031 SLC12A5Q9H2X9 1139 aa19.77■□□□□ 0.76
GABPB1-202ENST00000359031 ANKRD26Q9UPS8 1709 aa19.77■□□□□ 0.76
GABPB1-202ENST00000359031 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
GABPB1-202ENST00000359031 NRXN3Q9Y4C0 1643 aa19.77■□□□□ 0.76
GABPB1-202ENST00000359031 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
GABPB1-202ENST00000359031 CGNL1Q0VF96 1302 aa19.76■□□□□ 0.75
GABPB1-202ENST00000359031 KNDC1Q76NI1 1749 aa19.75■□□□□ 0.75
GABPB1-202ENST00000359031 RCAN3Q9UKA8 241 aa19.75■□□□□ 0.75
GABPB1-202ENST00000359031 SALL2Q9Y467 1007 aaPredicted RBP19.75■□□□□ 0.75
GABPB1-202ENST00000359031 RRP1P56182 461 aaKnown RBP19.73■□□□□ 0.75
GABPB1-202ENST00000359031 UBR1Q8IWV7 1749 aa19.73■□□□□ 0.75
GABPB1-202ENST00000359031 MORC1Q86VD1 984 aa19.73■□□□□ 0.75
GABPB1-202ENST00000359031 STK26Q9P289 416 aa19.73■□□□□ 0.75
GABPB1-202ENST00000359031 TOM1O60784 492 aa19.72■□□□□ 0.75
GABPB1-202ENST00000359031 HSPA1LP34931 641 aa19.72■□□□□ 0.75
GABPB1-202ENST00000359031 PLEKHH1Q9ULM0 1364 aa19.72■□□□□ 0.75
GABPB1-202ENST00000359031 ZNF521Q96K83 1311 aa19.71■□□□□ 0.75
GABPB1-202ENST00000359031 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.71■□□□□ 0.75
GABPB1-202ENST00000359031 PRAM1Q96QH2 718 aa19.71■□□□□ 0.75
GABPB1-202ENST00000359031 TNRQ92752 1358 aa19.71■□□□□ 0.75
GABPB1-202ENST00000359031 ABCC11Q96J66 1382 aa19.71■□□□□ 0.75
GABPB1-202ENST00000359031 MED1Q15648 1581 aaPredicted RBP19.7■□□□□ 0.74
GABPB1-202ENST00000359031 NGEFQ8N5V2 710 aa19.7■□□□□ 0.74
GABPB1-202ENST00000359031 CDCA7LQ96GN5 454 aa19.7■□□□□ 0.74
GABPB1-202ENST00000359031 CABP2Q9NPB3 220 aa19.7■□□□□ 0.74
GABPB1-202ENST00000359031 POGKQ9P215 609 aa19.7■□□□□ 0.74
GABPB1-202ENST00000359031 CPS1P31327 1500 aa19.7■□□□□ 0.74
GABPB1-202ENST00000359031 MED14O60244 1454 aa19.7■□□□□ 0.74
GABPB1-202ENST00000359031 KIF20BQ96Q89 1820 aa19.69■□□□□ 0.74
GABPB1-202ENST00000359031 A0A1W2PP64 1363 aa19.69■□□□□ 0.74
GABPB1-202ENST00000359031 B4GALNT3Q6L9W6 998 aa19.69■□□□□ 0.74
GABPB1-202ENST00000359031 SRPK2P78362 688 aaKnown RBP19.68■□□□□ 0.74
GABPB1-202ENST00000359031 SAFB2Q14151 953 aaKnown RBP eCLIP19.68■□□□□ 0.74
GABPB1-202ENST00000359031 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
GABPB1-202ENST00000359031 CD163L1Q9NR16 1453 aa19.66■□□□□ 0.74
GABPB1-202ENST00000359031 MINK1Q8N4C8 1332 aaPredicted RBP19.66■□□□□ 0.74
GABPB1-202ENST00000359031 ATP7BP35670 1465 aa19.64■□□□□ 0.73
GABPB1-202ENST00000359031 NLRP1Q9C000 1473 aa19.64■□□□□ 0.73
GABPB1-202ENST00000359031 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
GABPB1-202ENST00000359031 GOLGA2Q08379 1002 aa19.64■□□□□ 0.73
GABPB1-202ENST00000359031 ANKLE2Q86XL3 938 aa19.64■□□□□ 0.73
GABPB1-202ENST00000359031 TERF2IPQ9NYB0 399 aa19.64■□□□□ 0.73
GABPB1-202ENST00000359031 TECPR2O15040 1411 aa19.64■□□□□ 0.73
GABPB1-202ENST00000359031 CFAP53Q96M91 514 aa19.63■□□□□ 0.73
GABPB1-202ENST00000359031 CCDC146Q8IYE0 955 aa19.62■□□□□ 0.73
GABPB1-202ENST00000359031 CCDC136Q96JN2 1154 aa19.62■□□□□ 0.73
GABPB1-202ENST00000359031 SENP3Q9H4L4 574 aaPredicted RBP19.62■□□□□ 0.73
GABPB1-202ENST00000359031 FAM135BQ49AJ0 1406 aa19.61■□□□□ 0.73
GABPB1-202ENST00000359031 DUSP27Q5VZP5 1158 aa19.61■□□□□ 0.73
GABPB1-202ENST00000359031 THEMISQ8N1K5 641 aaPredicted RBP19.61■□□□□ 0.73
GABPB1-202ENST00000359031 TMEM2Q9UHN6 1383 aa19.61■□□□□ 0.73
GABPB1-202ENST00000359031 APAF1O14727 1248 aa19.59■□□□□ 0.73
GABPB1-202ENST00000359031 HDGFL2Q7Z4V5 671 aaPredicted RBP19.59■□□□□ 0.73
GABPB1-202ENST00000359031 CDK19Q9BWU1 502 aa19.59■□□□□ 0.73
GABPB1-202ENST00000359031 NPHP4O75161 1426 aaPredicted RBP19.59■□□□□ 0.73
GABPB1-202ENST00000359031 SLFN5Q08AF3 891 aa19.58■□□□□ 0.73
GABPB1-202ENST00000359031 MTHFSP49914 203 aa19.58■□□□□ 0.72
GABPB1-202ENST00000359031 TRMT2AQ8IZ69 625 aaKnown RBP19.58■□□□□ 0.72
GABPB1-202ENST00000359031 SIRT1Q96EB6 747 aa19.58■□□□□ 0.72
GABPB1-202ENST00000359031 ADGRB2O60241 1585 aa19.58■□□□□ 0.72
GABPB1-202ENST00000359031 NKTRP30414 1462 aaKnown RBP19.57■□□□□ 0.72
GABPB1-202ENST00000359031 METP08581 1390 aa19.57■□□□□ 0.72
GABPB1-202ENST00000359031 TNNT2P45379 298 aaPredicted RBP19.57■□□□□ 0.72
GABPB1-202ENST00000359031 RBM19Q9Y4C8 960 aaKnown RBP19.57■□□□□ 0.72
GABPB1-202ENST00000359031 RUNDC1Q96C34 613 aa19.56■□□□□ 0.72
GABPB1-202ENST00000359031 COL3A1P02461 1466 aaPredicted RBP19.56■□□□□ 0.72
GABPB1-202ENST00000359031 E9PSI1 815 aa19.55■□□□□ 0.72
GABPB1-202ENST00000359031 MON2Q7Z3U7 1717 aa19.54■□□□□ 0.72
GABPB1-202ENST00000359031 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
GABPB1-202ENST00000359031 NCBP3Q53F19 620 aaKnown RBP19.54■□□□□ 0.72
GABPB1-202ENST00000359031 EXOC6Q8TAG9 804 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms