RNA–Protein interactions for RNA: ENST00000358763.6

SYN3-202, Transcript of synapsin III, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SYN3, Length 3,126 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-202ENST00000358763 ARHGAP23Q9P227 1491 aa16.26■□□□□ 0.19
SYN3-202ENST00000358763 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
SYN3-202ENST00000358763 SLIT1O75093 1534 aa16.26■□□□□ 0.19
SYN3-202ENST00000358763 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
SYN3-202ENST00000358763 CARD14Q9BXL6 1004 aa16.26■□□□□ 0.19
SYN3-202ENST00000358763 SLC26A8Q96RN1 970 aa16.25■□□□□ 0.19
SYN3-202ENST00000358763 DLC1Q96QB1 1528 aa16.25■□□□□ 0.19
SYN3-202ENST00000358763 ABCC11Q96J66 1382 aa16.25■□□□□ 0.19
SYN3-202ENST00000358763 BRD4O60885 1362 aaPredicted RBP16.24■□□□□ 0.19
SYN3-202ENST00000358763 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
SYN3-202ENST00000358763 GTF3C3Q9Y5Q9 886 aa16.22■□□□□ 0.19
SYN3-202ENST00000358763 NSD3Q9BZ95 1437 aa16.22■□□□□ 0.19
SYN3-202ENST00000358763 KNDC1Q76NI1 1749 aa16.21■□□□□ 0.18
SYN3-202ENST00000358763 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.18
SYN3-202ENST00000358763 CDK19Q9BWU1 502 aa16.21■□□□□ 0.18
SYN3-202ENST00000358763 PUS7Q96PZ0 661 aaKnown RBP16.2■□□□□ 0.18
SYN3-202ENST00000358763 TECPR2O15040 1411 aa16.19■□□□□ 0.18
SYN3-202ENST00000358763 CPS1P31327 1500 aa16.19■□□□□ 0.18
SYN3-202ENST00000358763 MED14O60244 1454 aa16.19■□□□□ 0.18
SYN3-202ENST00000358763 ROBO2Q9HCK4 1378 aa16.18■□□□□ 0.18
SYN3-202ENST00000358763 SENP3-EIF4A1A0A087X0R7 540 aa16.18■□□□□ 0.18
SYN3-202ENST00000358763 NPC1L1Q9UHC9 1359 aa16.18■□□□□ 0.18
SYN3-202ENST00000358763 ATAD2Q6PL18 1390 aa16.18■□□□□ 0.18
SYN3-202ENST00000358763 PTPRUQ92729 1446 aa16.18■□□□□ 0.18
SYN3-202ENST00000358763 ZNF142P52746 1687 aaPredicted RBP16.17■□□□□ 0.18
SYN3-202ENST00000358763 ANKRD36BQ8N2N9 1353 aa16.17■□□□□ 0.18
SYN3-202ENST00000358763 PPP2R1AP30153 589 aa16.17■□□□□ 0.18
SYN3-202ENST00000358763 FAM135BQ49AJ0 1406 aa16.17■□□□□ 0.18
SYN3-202ENST00000358763 A0A1W2PP64 1363 aa16.16■□□□□ 0.18
SYN3-202ENST00000358763 SETD1BQ9UPS6 1966 aaKnown RBP16.15■□□□□ 0.18
SYN3-202ENST00000358763 TBX22Q9Y458 520 aa16.14■□□□□ 0.18
SYN3-202ENST00000358763 NINLQ9Y2I6 1382 aa16.14■□□□□ 0.17
SYN3-202ENST00000358763 AMOTL2Q9Y2J4 779 aa16.14■□□□□ 0.17
SYN3-202ENST00000358763 WASLO00401 505 aaPredicted RBP16.13■□□□□ 0.17
SYN3-202ENST00000358763 SIRT1Q96EB6 747 aa16.13■□□□□ 0.17
SYN3-202ENST00000358763 CABP1Q9NZU7 370 aa16.13■□□□□ 0.17
SYN3-202ENST00000358763 DIP2AQ14689 1571 aa16.12■□□□□ 0.17
SYN3-202ENST00000358763 CD163L1Q9NR16 1453 aa16.12■□□□□ 0.17
SYN3-202ENST00000358763 CGNL1Q0VF96 1302 aa16.12■□□□□ 0.17
SYN3-202ENST00000358763 TNNT2P45379 298 aaPredicted RBP16.12■□□□□ 0.17
SYN3-202ENST00000358763 ANKLE2Q86XL3 938 aa16.12■□□□□ 0.17
SYN3-202ENST00000358763 USP32Q8NFA0 1604 aa16.11■□□□□ 0.17
SYN3-202ENST00000358763 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.11■□□□□ 0.17
SYN3-202ENST00000358763 TERF2IPQ9NYB0 399 aa16.11■□□□□ 0.17
SYN3-202ENST00000358763 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
SYN3-202ENST00000358763 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
SYN3-202ENST00000358763 NCKAP5LQ9HCH0 1330 aa16.1■□□□□ 0.17
SYN3-202ENST00000358763 HDGFL2Q7Z4V5 671 aaPredicted RBP16.09■□□□□ 0.17
SYN3-202ENST00000358763 PPIP5K1Q6PFW1 1433 aa16.08■□□□□ 0.16
SYN3-202ENST00000358763 NUTM2FA1L443 756 aa16.08■□□□□ 0.16
SYN3-202ENST00000358763 NUDT16Q96DE0 195 aaKnown RBP16.08■□□□□ 0.16
SYN3-202ENST00000358763 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
SYN3-202ENST00000358763 PTCH1Q13635 1447 aa16.07■□□□□ 0.16
SYN3-202ENST00000358763 KCNA6P17658 529 aa16.07■□□□□ 0.16
SYN3-202ENST00000358763 PRR36Q9H6K5 1346 aa16.07■□□□□ 0.16
SYN3-202ENST00000358763 GGNBP2Q9H3C7 697 aa16.06■□□□□ 0.16
SYN3-202ENST00000358763 ADGRB2O60241 1585 aa16.06■□□□□ 0.16
SYN3-202ENST00000358763 ATP7BP35670 1465 aa16.05■□□□□ 0.16
SYN3-202ENST00000358763 NSD2O96028 1365 aa16.04■□□□□ 0.16
SYN3-202ENST00000358763 WDR43Q15061 677 aaKnown RBP eCLIP16.04■□□□□ 0.16
SYN3-202ENST00000358763 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.04■□□□□ 0.16
SYN3-202ENST00000358763 ADAMTS8Q9UP79 889 aa16.04■□□□□ 0.16
SYN3-202ENST00000358763 SALL2Q9Y467 1007 aaPredicted RBP16.04■□□□□ 0.16
SYN3-202ENST00000358763 CCDC61Q9Y6R9 512 aa16.04■□□□□ 0.16
SYN3-202ENST00000358763 PELP1Q8IZL8 1130 aaKnown RBP16.03■□□□□ 0.16
SYN3-202ENST00000358763 NPHP4O75161 1426 aaPredicted RBP16.03■□□□□ 0.16
SYN3-202ENST00000358763 FYB1O15117 783 aa16.03■□□□□ 0.16
SYN3-202ENST00000358763 PIK3R4Q99570 1358 aa16.03■□□□□ 0.16
SYN3-202ENST00000358763 CDC42BPGQ6DT37 1551 aa16.01■□□□□ 0.15
SYN3-202ENST00000358763 BLMP54132 1417 aaPredicted RBP16.01■□□□□ 0.15
SYN3-202ENST00000358763 CPSF1Q10570 1443 aaKnown RBP16.01■□□□□ 0.15
SYN3-202ENST00000358763 RBM33Q96EV2 1170 aaKnown RBP16.01■□□□□ 0.15
SYN3-202ENST00000358763 KIF20BQ96Q89 1820 aa16.01■□□□□ 0.15
SYN3-202ENST00000358763 CHD2O14647 1828 aaKnown RBP16■□□□□ 0.15
SYN3-202ENST00000358763 MTHFSP49914 203 aa16■□□□□ 0.15
SYN3-202ENST00000358763 ANKRD26Q9UPS8 1709 aa15.99■□□□□ 0.15
SYN3-202ENST00000358763 ITSN1Q15811 1721 aa15.99■□□□□ 0.15
SYN3-202ENST00000358763 POLR3AO14802 1390 aaPredicted RBP15.98■□□□□ 0.15
SYN3-202ENST00000358763 TOPAZ1Q8N9V7 1692 aa15.98■□□□□ 0.15
SYN3-202ENST00000358763 NKTRP30414 1462 aaKnown RBP15.98■□□□□ 0.15
SYN3-202ENST00000358763 EDC4Q6P2E9 1401 aaKnown RBP15.97■□□□□ 0.15
SYN3-202ENST00000358763 MON2Q7Z3U7 1717 aa15.97■□□□□ 0.15
SYN3-202ENST00000358763 AKAP12Q02952 1782 aa15.97■□□□□ 0.15
SYN3-202ENST00000358763 NME9Q86XW9 330 aa15.97■□□□□ 0.15
SYN3-202ENST00000358763 CCDC146Q8IYE0 955 aa15.97■□□□□ 0.15
SYN3-202ENST00000358763 KDM4FA0A1W2PPD8 638 aa15.96■□□□□ 0.15
SYN3-202ENST00000358763 ACEP12821 1306 aa15.96■□□□□ 0.15
SYN3-202ENST00000358763 INSRP06213 1382 aa15.96■□□□□ 0.15
SYN3-202ENST00000358763 HSPA2P54652 639 aa15.96■□□□□ 0.14
SYN3-202ENST00000358763 ZRANB1Q9UGI0 708 aa15.96■□□□□ 0.14
SYN3-202ENST00000358763 PMFBP1Q8TBY8 1022 aa15.95■□□□□ 0.14
SYN3-202ENST00000358763 RGPD8O14715 1765 aaPredicted RBP15.95■□□□□ 0.14
SYN3-202ENST00000358763 SHPRHQ149N8 1683 aa15.95■□□□□ 0.14
SYN3-202ENST00000358763 NALCNQ8IZF0 1738 aa15.95■□□□□ 0.14
SYN3-202ENST00000358763 SUPT16HQ9Y5B9 1047 aaKnown RBP15.94■□□□□ 0.14
SYN3-202ENST00000358763 FBLN1P23142 703 aa15.94■□□□□ 0.14
SYN3-202ENST00000358763 CFAP53Q96M91 514 aa15.94■□□□□ 0.14
SYN3-202ENST00000358763 PLEKHG3A1L390 1219 aa15.93■□□□□ 0.14
SYN3-202ENST00000358763 ZNF692Q9BU19 519 aaPredicted RBP15.92■□□□□ 0.14
SYN3-202ENST00000358763 SMG6Q86US8 1419 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms