RNA–Protein interactions for RNA: ENST00000357988.9

PHF8-204, Transcript of PHD finger protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHF8, Length 6,024 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF8-204ENST00000357988 CEP89Q96ST8 783 aa13.49□□□□□ -0.25
PHF8-204ENST00000357988 PRKRIP1Q9H875 184 aaPredicted RBP13.49□□□□□ -0.25
PHF8-204ENST00000357988 SLC26A8Q96RN1 970 aa13.48□□□□□ -0.25
PHF8-204ENST00000357988 TRDNQ13061 729 aa13.48□□□□□ -0.25
PHF8-204ENST00000357988 CDK19Q9BWU1 502 aa13.48□□□□□ -0.25
PHF8-204ENST00000357988 KIF21BO75037 1637 aa13.48□□□□□ -0.25
PHF8-204ENST00000357988 DDX19BQ9UMR2 479 aa13.48□□□□□ -0.25
PHF8-204ENST00000357988 MTMR7Q9Y216 660 aa13.48□□□□□ -0.25
PHF8-204ENST00000357988 DZIP1LQ8IYY4 767 aaKnown RBP13.47□□□□□ -0.25
PHF8-204ENST00000357988 CPLX2Q6PUV4 134 aaKnown RBP13.47□□□□□ -0.25
PHF8-204ENST00000357988 WASHC4Q2M389 1173 aa13.47□□□□□ -0.25
PHF8-204ENST00000357988 TOPBP1Q92547 1522 aa13.47□□□□□ -0.25
PHF8-204ENST00000357988 CABP4P57796 275 aa13.47□□□□□ -0.25
PHF8-204ENST00000357988 RBM19Q9Y4C8 960 aaKnown RBP13.47□□□□□ -0.25
PHF8-204ENST00000357988 CPLX1O14810 134 aa13.45□□□□□ -0.26
PHF8-204ENST00000357988 CENPQQ7L2Z9 268 aaPredicted RBP13.45□□□□□ -0.26
PHF8-204ENST00000357988 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
PHF8-204ENST00000357988 CNKSR2Q8WXI2 1034 aa13.45□□□□□ -0.26
PHF8-204ENST00000357988 ZNF428Q96B54 188 aa13.45□□□□□ -0.26
PHF8-204ENST00000357988 CFTRP13569 1480 aa13.45□□□□□ -0.26
PHF8-204ENST00000357988 RRP1P56182 461 aaKnown RBP13.45□□□□□ -0.26
PHF8-204ENST00000357988 EXOC6Q8TAG9 804 aa13.45□□□□□ -0.26
PHF8-204ENST00000357988 GAS2L2Q8NHY3 880 aa13.45□□□□□ -0.26
PHF8-204ENST00000357988 C9orf84Q5VXU9 1444 aa13.45□□□□□ -0.26
PHF8-204ENST00000357988 FOSBP53539 338 aa13.44□□□□□ -0.26
PHF8-204ENST00000357988 CCDC43Q96MW1 224 aaKnown RBP13.44□□□□□ -0.26
PHF8-204ENST00000357988 UBTFL1P0CB47 393 aaPredicted RBP13.44□□□□□ -0.26
PHF8-204ENST00000357988 MTHFSP49914 203 aa13.44□□□□□ -0.26
PHF8-204ENST00000357988 PLEKHH2Q8IVE3 1493 aa13.44□□□□□ -0.26
PHF8-204ENST00000357988 A0A0U1RQG5 324 aaPredicted RBP13.43□□□□□ -0.26
PHF8-204ENST00000357988 TPM2P07951 284 aa13.43□□□□□ -0.26
PHF8-204ENST00000357988 IKQ13123 557 aaPredicted RBP13.43□□□□□ -0.26
PHF8-204ENST00000357988 HECW1Q76N89 1606 aa13.43□□□□□ -0.26
PHF8-204ENST00000357988 KRI1Q8N9T8 703 aaKnown RBP13.43□□□□□ -0.26
PHF8-204ENST00000357988 CABP1Q9NZU7 370 aa13.43□□□□□ -0.26
PHF8-204ENST00000357988 HSP90AB4PQ58FF6 505 aa13.42□□□□□ -0.26
PHF8-204ENST00000357988 CCDC30Q5VVM6 783 aa13.42□□□□□ -0.26
PHF8-204ENST00000357988 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.42□□□□□ -0.26
PHF8-204ENST00000357988 ERC2O15083 957 aa13.42□□□□□ -0.26
PHF8-204ENST00000357988 SYNJ1O43426 1573 aa13.42□□□□□ -0.26
PHF8-204ENST00000357988 KDM4AO75164 1064 aa13.42□□□□□ -0.26
PHF8-204ENST00000357988 RNF20Q5VTR2 975 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 SPG7Q9UQ90 795 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 SLC4A3P48751 1232 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 PRDM11Q9NQV5 511 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 RTEL1-TNFRSF6BF6WH68 1400 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 KIF7Q2M1P5 1343 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 PHF14O94880 888 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 POLA1P09884 1462 aaPredicted RBP13.41□□□□□ -0.26
PHF8-204ENST00000357988 TPM3P06753 285 aa13.41□□□□□ -0.26
PHF8-204ENST00000357988 PRKAR2BP31323 418 aa13.4□□□□□ -0.26
PHF8-204ENST00000357988 CCAR1Q8IX12 1150 aaKnown RBP13.4□□□□□ -0.26
PHF8-204ENST00000357988 ERBINQ96RT1 1412 aa13.4□□□□□ -0.26
PHF8-204ENST00000357988 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.26
PHF8-204ENST00000357988 CNNM1Q9NRU3 951 aa13.4□□□□□ -0.26
PHF8-204ENST00000357988 PCMTD1Q96MG8 357 aaPredicted RBP13.4□□□□□ -0.27
PHF8-204ENST00000357988 DNAJC2Q99543 621 aaKnown RBP13.4□□□□□ -0.27
PHF8-204ENST00000357988 REC8O95072 547 aa13.39□□□□□ -0.27
PHF8-204ENST00000357988 MYL6BP14649 208 aa13.39□□□□□ -0.27
PHF8-204ENST00000357988 TSR1Q2NL82 804 aaKnown RBP13.39□□□□□ -0.27
PHF8-204ENST00000357988 CNTLNQ9NXG0 1405 aa13.38□□□□□ -0.27
PHF8-204ENST00000357988 GOLGA6L3A6NEY3 463 aa13.38□□□□□ -0.27
PHF8-204ENST00000357988 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
PHF8-204ENST00000357988 SLC52A1Q9NWF4 448 aa13.38□□□□□ -0.27
PHF8-204ENST00000357988 CCDC7Q96M83 1385 aa13.38□□□□□ -0.27
PHF8-204ENST00000357988 TNNT3P45378 269 aaPredicted RBP13.38□□□□□ -0.27
PHF8-204ENST00000357988 RALYLQ86SE5 291 aaKnown RBP13.38□□□□□ -0.27
PHF8-204ENST00000357988 CCDC47Q96A33 483 aaKnown RBP13.38□□□□□ -0.27
PHF8-204ENST00000357988 FAM161AQ3B820 660 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 SULT6B1Q6IMI4 303 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 BICDL1Q6ZP65 573 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 TBC1D2BQ9UPU7 963 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 ATP6V1DQ9Y5K8 247 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
PHF8-204ENST00000357988 ZNF530Q6P9A1 599 aaPredicted RBP13.37□□□□□ -0.27
PHF8-204ENST00000357988 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 TTC39AQ5SRH9 613 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 DNMBPQ6XZF7 1577 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 ZBED9Q6R2W3 1325 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 RBM5P52756 815 aaKnown RBP eCLIP13.37□□□□□ -0.27
PHF8-204ENST00000357988 EFCAB5A4FU69 1503 aa13.37□□□□□ -0.27
PHF8-204ENST00000357988 HMGB2P26583 209 aaKnown RBP13.36□□□□□ -0.27
PHF8-204ENST00000357988 FSD1Q9BTV5 496 aa13.36□□□□□ -0.27
PHF8-204ENST00000357988 SLC12A5Q9H2X9 1139 aa13.36□□□□□ -0.27
PHF8-204ENST00000357988 ADAMTS2O95450 1211 aa13.35□□□□□ -0.27
PHF8-204ENST00000357988 PANK1Q8TE04 598 aa13.35□□□□□ -0.27
PHF8-204ENST00000357988 LNPKQ9C0E8 428 aa13.35□□□□□ -0.27
PHF8-204ENST00000357988 ERICH3Q5RHP9 1530 aa13.35□□□□□ -0.27
PHF8-204ENST00000357988 GOLGA6L19H0YKK7 550 aa13.35□□□□□ -0.27
PHF8-204ENST00000357988 RRS1Q15050 365 aaKnown RBP13.35□□□□□ -0.27
PHF8-204ENST00000357988 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
PHF8-204ENST00000357988 HMGXB3Q12766 1538 aa13.35□□□□□ -0.27
PHF8-204ENST00000357988 TROQ12816 1431 aaPredicted RBP13.35□□□□□ -0.27
PHF8-204ENST00000357988 INTS3Q68E01 1043 aaKnown RBP13.34□□□□□ -0.27
PHF8-204ENST00000357988 ADAMTS8Q9UP79 889 aa13.34□□□□□ -0.27
PHF8-204ENST00000357988 IPO9Q96P70 1041 aaKnown RBP13.34□□□□□ -0.27
PHF8-204ENST00000357988 NINLQ9Y2I6 1382 aa13.34□□□□□ -0.27
PHF8-204ENST00000357988 BECN2A8MW95 431 aa13.34□□□□□ -0.27
PHF8-204ENST00000357988 DEKP35659 375 aaKnown RBP13.34□□□□□ -0.27
PHF8-204ENST00000357988 STK11IPQ8N1F8 1099 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms